Click here to switch to the map view.

The map label for this gene is 218927947

Identifier: 218927947

GI number: 218927947

Start: 822543

End: 824768

Strand: Reverse

Name: 218927947

Synonym: YPO0764

Alternate gene names: NA

Gene position: 824768-822543 (Counterclockwise)

Preceding gene: 218927948

Following gene: 218927946

Centisome position: 17.72

GC content: 50.54

Gene sequence:

>2226_bases
ATGTTTGCTGACAGTAATAAAGCCAAAGTAAAAGAACGTAGTGCAGTTAACTCGGCTTCAACGGGGACAGCCGCTATTTC
TGCAGCAATTAACGCACCTTCCGGGCTACAATTTAAGCTGACCGCTGCCGGTTTACCGCCTCAGACATTTGCCGTCGTCG
ATTTTTCATTAAACGAGGCGTTCTCCTCACCTTTTGTTTTACATGTTGGCTTGGCCAGTGCCGATCCTGCGGTGGATTTT
TCTGCGGTATTGGATGAAGACGCGACGTTGTCTATCTGGCGCGAAGGTATTTTACAGCGCAGTATTACTGGCATGATTGC
CAGCTTTGAACAGGGCAATACCGGGTTTCACCAGACCCGCTACAGTATGGTGATCCGCCCCGCGCTGTGGCGCACTTCTT
TGCGCCGCAACTCACGAATTTTCCAGTTGGAATCGGTTGAGGCCATCATTTCTACGCTGTTGAAAGAGAATGGCATTAAT
GATTTTGCCTTCGGTTTCCGTCATTCACATCCAGCACGTGAGTTCTGTGTGCAATATCAAGAGTCGGATTTTGATTTTAT
CCAGCGCCTGACAGCAGAAGAGGGCATTTTCTACTACTTCGAATTCAGCACGGGCAAAAACACCGTGGTCTATGCCGATG
ATGTTGGCTCCCTGCCGAAGGGGGCGTCACTGCCGTATAACCCGAATGTGGCGGCACAGGCGCAGGAACTGAGCATCACC
ACCTTTACCCGCAGCGCGCAAGTACGCCCGGCGATGGTACAGCTAAAAGACTACACCTTCAAAAATCCCAAATGGGCGGC
TGAGTTCAGTGAACAAGCGCGCGAGTTACAGAATCAGAGGCCGGATTACGAGCATTTTGACTTCCCTGGGCGTTTCAAAG
ATGAGCAACATGGCAAGGATTTTACCCGTTACCGGTTGGAGGCACTGCGCAACGATGCGAATAAGGGGCAGGGGGAAAGT
AACGAATTTACCTTGCAGCCGGGGCAACTCTTTAGCCTGAGTGCCCACCCGCGTGACGATTTAAATCATGCCTGGCAGAT
CGTCAGCATTCAGCATACCGGTAAACAGATGCAGGCACTGGAGCAAGAATCTGGCGATCAGGGCACCGTATTGTTTAACC
AGTTCAGCTTTATTCCACCGACGCAAACCTGGCGGCCAACGCCGCTGCCAAAACCAGTCACTGATGGCCCACAGATCGCG
ATGGTCGTGGGGCCCCCGAGCGAAGAAATTTACTGCGACGAGTATGGCCGCATCCGGCTGCAATTCCAGTGGGACCGCTA
TGGTCAAAGTAACGATCAAAGTTCATGTTGGATCCGCGTTACCCAGCCGTGGGCTGGCCAAGGCTGGGGCATGTTGGCGA
TCCCGCGTATCGGCCAGGAAGTGGTGGTAGATTTTCTGCACGGTGACCCGGACCAACCGATTGTCACCGGGCGCACTTAT
CATGCTAATAACCTTCCCCCTTCAGCATTGCCTGGGGCGAAAACGCAGATGGCGCTACAGTCGAAAACCCATAAAGGCGA
AGGCTATAACGAATTGCGTTTTGAGGATCAAGACGGCAAGCAAGAGCTGTCGATGCGGGCACAGAGGGACATGAATACCA
CGGTGTTGAATGACCGTTCGACCACGGTTTCAGGCAATCACACCGAAACGGTGACCAAAGATCAAGCGGTGACGGTTTCG
GGTAATCAGACCATGGATATCACCCAAGACCAAACCATTACTGTCACTGGGACACAACGCATTGATGTGACTCAAGATCG
CATCATTGATGTGACAGCAGAACAACAAACGACGGTAAAAGCAGATGATCGGTTACTGATATCCGGAAAACAGAAAACCA
AGATAGATCTGGATCAGGAATATGAGGTTGTCGGCTCACAAAAAAAGACTATTGGGGCTAACCAAACACTGAAGGTGGGC
GGATATCAAAAAAATACCCTCGAGGGTTATAAAAAATCCAAGATTGGCGGCGATAATACCACCACCGTTGGGGGGCACGA
TAAATTAACCGTCGGTGACACAATCACTATCACCGCCGGCACCAGTATTACGCTGCAATGTGGTGCCTCCAGTATTGTTA
TGGATGAAGCCGGTAATATAAAAATCACCGGGGTTAATATCACCTCTGCGGCATCGACGACACATACGATAAAAGCTAAA
ACAGTGACATCCTGCGGTGATACGGAAAATATCGTGGAAGGTGGCATTCTAAAATTAAATCCTTAA

Upstream 100 bases:

>100_bases
CCGGCCGCTGATAAATCATCGCTAGAGTGCGTGTTTAATCCGTTATTTCTCACTGATGCGGTAGCCGTGTCTACGCATTA
ACTTCCAGGATGGAGCAGAT

Downstream 100 bases:

>100_bases
CGTATTGTCAGGAAGGATATTTGGTATGGAAACCCCAGGGGTAAGTAATCCTATTGAGCGTCGTTTTATGCAGGCGCATG
ATGACTGGTTAACGTTTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VgrG Protein; Rhs-Family Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; VgrG-Like Protein; Rhs Accessory Genetic Element; RHS Accessory Genetic Element; Vgr Protein; Rhs Element Vgr Family; Rhs Protein; Rhs Element Vgr ProteinGp5-Like; Rhs/Vgr-Family Protein; Type VI Secretion System VgrG Family Protein; VgrG Family T6SS G; Rhs Element Vgr Protein Subfamily; Vgr Family Type VI Secretion System; Rhs Element Protein; Type VI Secretion System Effector Protein VgrS; Vrg Family Protein; VrgG Protein

Number of amino acids: Translated: 741; Mature: 741

Protein sequence:

>741_residues
MFADSNKAKVKERSAVNSASTGTAAISAAINAPSGLQFKLTAAGLPPQTFAVVDFSLNEAFSSPFVLHVGLASADPAVDF
SAVLDEDATLSIWREGILQRSITGMIASFEQGNTGFHQTRYSMVIRPALWRTSLRRNSRIFQLESVEAIISTLLKENGIN
DFAFGFRHSHPAREFCVQYQESDFDFIQRLTAEEGIFYYFEFSTGKNTVVYADDVGSLPKGASLPYNPNVAAQAQELSIT
TFTRSAQVRPAMVQLKDYTFKNPKWAAEFSEQARELQNQRPDYEHFDFPGRFKDEQHGKDFTRYRLEALRNDANKGQGES
NEFTLQPGQLFSLSAHPRDDLNHAWQIVSIQHTGKQMQALEQESGDQGTVLFNQFSFIPPTQTWRPTPLPKPVTDGPQIA
MVVGPPSEEIYCDEYGRIRLQFQWDRYGQSNDQSSCWIRVTQPWAGQGWGMLAIPRIGQEVVVDFLHGDPDQPIVTGRTY
HANNLPPSALPGAKTQMALQSKTHKGEGYNELRFEDQDGKQELSMRAQRDMNTTVLNDRSTTVSGNHTETVTKDQAVTVS
GNQTMDITQDQTITVTGTQRIDVTQDRIIDVTAEQQTTVKADDRLLISGKQKTKIDLDQEYEVVGSQKKTIGANQTLKVG
GYQKNTLEGYKKSKIGGDNTTTVGGHDKLTVGDTITITAGTSITLQCGASSIVMDEAGNIKITGVNITSAASTTHTIKAK
TVTSCGDTENIVEGGILKLNP

Sequences:

>Translated_741_residues
MFADSNKAKVKERSAVNSASTGTAAISAAINAPSGLQFKLTAAGLPPQTFAVVDFSLNEAFSSPFVLHVGLASADPAVDF
SAVLDEDATLSIWREGILQRSITGMIASFEQGNTGFHQTRYSMVIRPALWRTSLRRNSRIFQLESVEAIISTLLKENGIN
DFAFGFRHSHPAREFCVQYQESDFDFIQRLTAEEGIFYYFEFSTGKNTVVYADDVGSLPKGASLPYNPNVAAQAQELSIT
TFTRSAQVRPAMVQLKDYTFKNPKWAAEFSEQARELQNQRPDYEHFDFPGRFKDEQHGKDFTRYRLEALRNDANKGQGES
NEFTLQPGQLFSLSAHPRDDLNHAWQIVSIQHTGKQMQALEQESGDQGTVLFNQFSFIPPTQTWRPTPLPKPVTDGPQIA
MVVGPPSEEIYCDEYGRIRLQFQWDRYGQSNDQSSCWIRVTQPWAGQGWGMLAIPRIGQEVVVDFLHGDPDQPIVTGRTY
HANNLPPSALPGAKTQMALQSKTHKGEGYNELRFEDQDGKQELSMRAQRDMNTTVLNDRSTTVSGNHTETVTKDQAVTVS
GNQTMDITQDQTITVTGTQRIDVTQDRIIDVTAEQQTTVKADDRLLISGKQKTKIDLDQEYEVVGSQKKTIGANQTLKVG
GYQKNTLEGYKKSKIGGDNTTTVGGHDKLTVGDTITITAGTSITLQCGASSIVMDEAGNIKITGVNITSAASTTHTIKAK
TVTSCGDTENIVEGGILKLNP
>Mature_741_residues
MFADSNKAKVKERSAVNSASTGTAAISAAINAPSGLQFKLTAAGLPPQTFAVVDFSLNEAFSSPFVLHVGLASADPAVDF
SAVLDEDATLSIWREGILQRSITGMIASFEQGNTGFHQTRYSMVIRPALWRTSLRRNSRIFQLESVEAIISTLLKENGIN
DFAFGFRHSHPAREFCVQYQESDFDFIQRLTAEEGIFYYFEFSTGKNTVVYADDVGSLPKGASLPYNPNVAAQAQELSIT
TFTRSAQVRPAMVQLKDYTFKNPKWAAEFSEQARELQNQRPDYEHFDFPGRFKDEQHGKDFTRYRLEALRNDANKGQGES
NEFTLQPGQLFSLSAHPRDDLNHAWQIVSIQHTGKQMQALEQESGDQGTVLFNQFSFIPPTQTWRPTPLPKPVTDGPQIA
MVVGPPSEEIYCDEYGRIRLQFQWDRYGQSNDQSSCWIRVTQPWAGQGWGMLAIPRIGQEVVVDFLHGDPDQPIVTGRTY
HANNLPPSALPGAKTQMALQSKTHKGEGYNELRFEDQDGKQELSMRAQRDMNTTVLNDRSTTVSGNHTETVTKDQAVTVS
GNQTMDITQDQTITVTGTQRIDVTQDRIIDVTAEQQTTVKADDRLLISGKQKTKIDLDQEYEVVGSQKKTIGANQTLKVG
GYQKNTLEGYKKSKIGGDNTTTVGGHDKLTVGDTITITAGTSITLQCGASSIVMDEAGNIKITGVNITSAASTTHTIKAK
TVTSCGDTENIVEGGILKLNP

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81758; Mature: 81758

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFADSNKAKVKERSAVNSASTGTAAISAAINAPSGLQFKLTAAGLPPQTFAVVDFSLNEA
CCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCEEEEEEEEHHHH
FSSPFVLHVGLASADPAVDFSAVLDEDATLSIWREGILQRSITGMIASFEQGNTGFHQTR
CCCCEEEEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEE
YSMVIRPALWRTSLRRNSRIFQLESVEAIISTLLKENGINDFAFGFRHSHPAREFCVQYQ
EEEEEEHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHC
ESDFDFIQRLTAEEGIFYYFEFSTGKNTVVYADDVGSLPKGASLPYNPNVAAQAQELSIT
CCCHHHHHHHHHCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEE
TFTRSAQVRPAMVQLKDYTFKNPKWAAEFSEQARELQNQRPDYEHFDFPGRFKDEQHGKD
EEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH
FTRYRLEALRNDANKGQGESNEFTLQPGQLFSLSAHPRDDLNHAWQIVSIQHTGKQMQAL
HHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCEEEEEEEECCCHHHHHH
EQESGDQGTVLFNQFSFIPPTQTWRPTPLPKPVTDGPQIAMVVGPPSEEIYCDEYGRIRL
HHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCEEEE
QFQWDRYGQSNDQSSCWIRVTQPWAGQGWGMLAIPRIGQEVVVDFLHGDPDQPIVTGRTY
EEEECCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCEEECCEE
HANNLPPSALPGAKTQMALQSKTHKGEGYNELRFEDQDGKQELSMRAQRDMNTTVLNDRS
ECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEECCCCCHHHHHHHHHCCCCCEEECCCC
TTVSGNHTETVTKDQAVTVSGNQTMDITQDQTITVTGTQRIDVTQDRIIDVTAEQQTTVK
CEECCCCCEEECCCCEEEECCCCEEEECCCCEEEEECCEEEECCCCEEEEEECCCCEEEE
ADDRLLISGKQKTKIDLDQEYEVVGSQKKTIGANQTLKVGGYQKNTLEGYKKSKIGGDNT
CCCEEEEECCCCCEECCCCCHHHHCCCCCCCCCCCEEEECCCCCHHHCCHHHHCCCCCCC
TTVGGHDKLTVGDTITITAGTSITLQCGASSIVMDEAGNIKITGVNITSAASTTHTIKAK
EEECCCCEEEECCEEEEEECCEEEEEECCCEEEEECCCCEEEEEEEEECCCCCEEEEEEE
TVTSCGDTENIVEGGILKLNP
EEECCCCCHHHHCCCEEEECC
>Mature Secondary Structure
MFADSNKAKVKERSAVNSASTGTAAISAAINAPSGLQFKLTAAGLPPQTFAVVDFSLNEA
CCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCEEEEEEEEHHHH
FSSPFVLHVGLASADPAVDFSAVLDEDATLSIWREGILQRSITGMIASFEQGNTGFHQTR
CCCCEEEEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEE
YSMVIRPALWRTSLRRNSRIFQLESVEAIISTLLKENGINDFAFGFRHSHPAREFCVQYQ
EEEEEEHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHC
ESDFDFIQRLTAEEGIFYYFEFSTGKNTVVYADDVGSLPKGASLPYNPNVAAQAQELSIT
CCCHHHHHHHHHCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEE
TFTRSAQVRPAMVQLKDYTFKNPKWAAEFSEQARELQNQRPDYEHFDFPGRFKDEQHGKD
EEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH
FTRYRLEALRNDANKGQGESNEFTLQPGQLFSLSAHPRDDLNHAWQIVSIQHTGKQMQAL
HHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCEEEEEEEECCCHHHHHH
EQESGDQGTVLFNQFSFIPPTQTWRPTPLPKPVTDGPQIAMVVGPPSEEIYCDEYGRIRL
HHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCEEEE
QFQWDRYGQSNDQSSCWIRVTQPWAGQGWGMLAIPRIGQEVVVDFLHGDPDQPIVTGRTY
EEEECCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCEEECCEE
HANNLPPSALPGAKTQMALQSKTHKGEGYNELRFEDQDGKQELSMRAQRDMNTTVLNDRS
ECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEECCCCCHHHHHHHHHCCCCCEEECCCC
TTVSGNHTETVTKDQAVTVSGNQTMDITQDQTITVTGTQRIDVTQDRIIDVTAEQQTTVK
CEECCCCCEEECCCCEEEECCCCEEEECCCCEEEEECCEEEECCCCEEEEEECCCCEEEE
ADDRLLISGKQKTKIDLDQEYEVVGSQKKTIGANQTLKVGGYQKNTLEGYKKSKIGGDNT
CCCEEEEECCCCCEECCCCCHHHHCCCCCCCCCCCEEEECCCCCHHHCCHHHHCCCCCCC
TTVGGHDKLTVGDTITITAGTSITLQCGASSIVMDEAGNIKITGVNITSAASTTHTIKAK
EEECCCCEEEECCEEEEEECCEEEEEECCCEEEEECCCCEEEEEEEEECCCCCEEEEEEE
TVTSCGDTENIVEGGILKLNP
EEECCCCCHHHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA