| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is yhhZ [H]
Identifier: 218927831
GI number: 218927831
Start: 695728
End: 697110
Strand: Direct
Name: yhhZ [H]
Synonym: YPO0639
Alternate gene names: 218927831
Gene position: 695728-697110 (Clockwise)
Preceding gene: 218927830
Following gene: 218927832
Centisome position: 14.95
GC content: 48.73
Gene sequence:
>1383_bases ATGAGCTTCAACCTGCCCGGAATGTATTTGTATTACCTTTCAAGAGATAATTTAGCCCCTGAAGAATACGAGCGGATAAT CAGCCCGCACGCTGCCTGGGCGCGTATCTGCCGCGAATATGAATTTGACGACAGTCACAATACCAGCCGTTACCTTATCA ATATGCGGGAACGTGAACAGCGCTCATCTCCAGATCAGCCACGTCCAGGCGGGATACGTGAAAAAGAGAAACTGGAAAAA CTGGTTTTTTCGGGTGACGTGGTGATGTTAAGTGATATGTACGGCCCTGCCCGGCTGTTCTACATCAATGGTGAAGGTCA GTTGATGTCTACCGATCCCCATGCTTTCCGTTTCGAGGGTGCCGCAAAGATTATCAAGGCATTTGACGATTCGGTGAAAT GCCGGAACTATCAGCGAACGGGTGGAAAGCCACGTTCAACACAAACAAGGCGACTAAAGAGCACGACGAATACGATACCC GATCGTTCTATGGTAACTCGTGCTTCCGATGAATCTGGACGGGTATTATCTGCAAAATGGCAATCTGTCACCGATAGCGC CAAAACCTTATGGGAAGCCACCCCTTTCACACATGACAAAGCCACAACTGAGGCCGCCCGTGGTCGTATTGCTGATGGCG CGGTAGGTACCCTTGAGGGGCTAGGTACTTTGATGGGGCCTTCCGCCCAAGAATATATGGCTGGTGCCTTTAATCCAGAG CAGGCCGCAATAAATAAAGTCCGACAGCAAAATCAACAAGCCGCTGGCAAGGCTATTTATGATAATACGAAAGGGGCGGT GACAGACGCTTATCAGCGCAATGGATTAGCCGGTGCGGCCGCCATGGTAGTCACGGCATCCGTGGCGGAGTTGGCGGGTA CTAAGGGGTTGGGAACGGTAGAAAAAGTTGGCACATTAGGCGATGTCGCTAAGTTAGGGAAAGCTGTTGAGCTGGAAAAA CTGGAGGGGTACCTTGGCACTTATAAAGGTCAGAAAGTATTGCTACAAAACGTCGATGTTGTGAAGATGGATTACGTACG ACGCTCGACTGCTGATAGGAATTTATTGAGGAAGGAGTTTGATAATGGCGTCCGTAAAAAATTCCTTAAAGATATAGCTA ACAATCCCGAAGTTGTGAAACGCCTTGACGCCTTCGATCGCAGCGTCCTAGCCAAAGGCGTTGTACCCGATGGTTATCAG GTACACCACAAACTACCGCTAGATGACAGCGGCAATAACAATTTTGATAATCTAGTGTTGATAAGTACGCGCCCTGAGCA TGCGGCCTTCACCACTACGCAGAAGCACATAACAAAAAATCTTACCCCCACGGGCACTAATATTGTGTTATGGCCAAAGC CTCAAGGCATAATTTATCCATAG
Upstream 100 bases:
>100_bases GGTGGAGATATAAGTGGATCACTTTTCATCCGTCGTTGACAACAACCCCCTAAGAAATGTAAGGTAATGCCGGTGCGACT AACTCCACAAGGAATGGGAT
Downstream 100 bases:
>100_bases GAATATCTATGACCGACATTGAAAAAGCAGTGACTACTTTTCAAGCGTACCGAGCTGCGATTGGTTACCCGAAAATTCCA CCCTATGAGGGGGAGGTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 460; Mature: 459
Protein sequence:
>460_residues MSFNLPGMYLYYLSRDNLAPEEYERIISPHAAWARICREYEFDDSHNTSRYLINMREREQRSSPDQPRPGGIREKEKLEK LVFSGDVVMLSDMYGPARLFYINGEGQLMSTDPHAFRFEGAAKIIKAFDDSVKCRNYQRTGGKPRSTQTRRLKSTTNTIP DRSMVTRASDESGRVLSAKWQSVTDSAKTLWEATPFTHDKATTEAARGRIADGAVGTLEGLGTLMGPSAQEYMAGAFNPE QAAINKVRQQNQQAAGKAIYDNTKGAVTDAYQRNGLAGAAAMVVTASVAELAGTKGLGTVEKVGTLGDVAKLGKAVELEK LEGYLGTYKGQKVLLQNVDVVKMDYVRRSTADRNLLRKEFDNGVRKKFLKDIANNPEVVKRLDAFDRSVLAKGVVPDGYQ VHHKLPLDDSGNNNFDNLVLISTRPEHAAFTTTQKHITKNLTPTGTNIVLWPKPQGIIYP
Sequences:
>Translated_460_residues MSFNLPGMYLYYLSRDNLAPEEYERIISPHAAWARICREYEFDDSHNTSRYLINMREREQRSSPDQPRPGGIREKEKLEK LVFSGDVVMLSDMYGPARLFYINGEGQLMSTDPHAFRFEGAAKIIKAFDDSVKCRNYQRTGGKPRSTQTRRLKSTTNTIP DRSMVTRASDESGRVLSAKWQSVTDSAKTLWEATPFTHDKATTEAARGRIADGAVGTLEGLGTLMGPSAQEYMAGAFNPE QAAINKVRQQNQQAAGKAIYDNTKGAVTDAYQRNGLAGAAAMVVTASVAELAGTKGLGTVEKVGTLGDVAKLGKAVELEK LEGYLGTYKGQKVLLQNVDVVKMDYVRRSTADRNLLRKEFDNGVRKKFLKDIANNPEVVKRLDAFDRSVLAKGVVPDGYQ VHHKLPLDDSGNNNFDNLVLISTRPEHAAFTTTQKHITKNLTPTGTNIVLWPKPQGIIYP >Mature_459_residues SFNLPGMYLYYLSRDNLAPEEYERIISPHAAWARICREYEFDDSHNTSRYLINMREREQRSSPDQPRPGGIREKEKLEKL VFSGDVVMLSDMYGPARLFYINGEGQLMSTDPHAFRFEGAAKIIKAFDDSVKCRNYQRTGGKPRSTQTRRLKSTTNTIPD RSMVTRASDESGRVLSAKWQSVTDSAKTLWEATPFTHDKATTEAARGRIADGAVGTLEGLGTLMGPSAQEYMAGAFNPEQ AAINKVRQQNQQAAGKAIYDNTKGAVTDAYQRNGLAGAAAMVVTASVAELAGTKGLGTVEKVGTLGDVAKLGKAVELEKL EGYLGTYKGQKVLLQNVDVVKMDYVRRSTADRNLLRKEFDNGVRKKFLKDIANNPEVVKRLDAFDRSVLAKGVVPDGYQV HHKLPLDDSGNNNFDNLVLISTRPEHAAFTTTQKHITKNLTPTGTNIVLWPKPQGIIYP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hcp1 family [H]
Homologues:
Organism=Escherichia coli, GI1789850, Length=141, Percent_Identity=43.2624113475177, Blast_Score=109, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017728 - InterPro: IPR008514 [H]
Pfam domain/function: PF05638 DUF796 [H]
EC number: NA
Molecular weight: Translated: 50971; Mature: 50840
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFNLPGMYLYYLSRDNLAPEEYERIISPHAAWARICREYEFDDSHNTSRYLINMREREQ CCCCCCCEEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEECHHHHH RSSPDQPRPGGIREKEKLEKLVFSGDVVMLSDMYGPARLFYINGEGQLMSTDPHAFRFEG CCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCEEEECCCCCEEEHH AAKIIKAFDDSVKCRNYQRTGGKPRSTQTRRLKSTTNTIPDRSMVTRASDESGRVLSAKW HHHHHHHHCCCHHHCCHHHCCCCCCCCHHHHHHHHHCCCCCCHHHCCCCCCCCCEEEHHH QSVTDSAKTLWEATPFTHDKATTEAARGRIADGAVGTLEGLGTLMGPSAQEYMAGAFNPE HHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCHH QAAINKVRQQNQQAAGKAIYDNTKGAVTDAYQRNGLAGAAAMVVTASVAELAGTKGLGTV HHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHH EKVGTLGDVAKLGKAVELEKLEGYLGTYKGQKVLLQNVDVVKMDYVRRSTADRNLLRKEF HHHCCHHHHHHHCCHHHHHHHHHHHHCCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHH DNGVRKKFLKDIANNPEVVKRLDAFDRSVLAKGVVPDGYQVHHKLPLDDSGNNNFDNLVL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEEE ISTRPEHAAFTTTQKHITKNLTPTGTNIVLWPKPQGIIYP EECCCCCCEEHHHHHHHHCCCCCCCCEEEEECCCCCCCCC >Mature Secondary Structure SFNLPGMYLYYLSRDNLAPEEYERIISPHAAWARICREYEFDDSHNTSRYLINMREREQ CCCCCCEEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEECHHHHH RSSPDQPRPGGIREKEKLEKLVFSGDVVMLSDMYGPARLFYINGEGQLMSTDPHAFRFEG CCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCEEEECCCCCEEEHH AAKIIKAFDDSVKCRNYQRTGGKPRSTQTRRLKSTTNTIPDRSMVTRASDESGRVLSAKW HHHHHHHHCCCHHHCCHHHCCCCCCCCHHHHHHHHHCCCCCCHHHCCCCCCCCCEEEHHH QSVTDSAKTLWEATPFTHDKATTEAARGRIADGAVGTLEGLGTLMGPSAQEYMAGAFNPE HHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCHH QAAINKVRQQNQQAAGKAIYDNTKGAVTDAYQRNGLAGAAAMVVTASVAELAGTKGLGTV HHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHH EKVGTLGDVAKLGKAVELEKLEGYLGTYKGQKVLLQNVDVVKMDYVRRSTADRNLLRKEF HHHCCHHHHHHHCCHHHHHHHHHHHHCCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHH DNGVRKKFLKDIANNPEVVKRLDAFDRSVLAKGVVPDGYQVHHKLPLDDSGNNNFDNLVL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEEE ISTRPEHAAFTTTQKHITKNLTPTGTNIVLWPKPQGIIYP EECCCCCCEEHHHHHHHHCCCCCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]