Click here to switch to the map view.

The map label for this gene is ydhR [H]

Identifier: 218927823

GI number: 218927823

Start: 689361

End: 689663

Strand: Reverse

Name: ydhR [H]

Synonym: YPO0629

Alternate gene names: 218927823

Gene position: 689663-689361 (Counterclockwise)

Preceding gene: 218927824

Following gene: 218927816

Centisome position: 14.82

GC content: 45.21

Gene sequence:

>303_bases
ATGAGTTATATTCTTCAGGTTGATTTCCCTTATACCGGCCCTTGGGGCAATGAAATGACGAAAGCAATGGAAGGTCTTGC
ACGATCAATTGCCGAAGAGCCGGGCCTTATTTGGAAGATCTGGACTGTAAATGAAACAACTAACGAGGCGGGAGGAATCT
ATTTATTCAGCGATATTTCTGCGGCGAAAGCTTATTTGGCGATGCATACTGCGCGTCTGAAGAGTTTCGGTATTCCCCAT
GTAAATGGGAAGATATTTTTGGTAAACGAAGCCCTATCACAGCTCGATCGCGCGCCCATTTAA

Upstream 100 bases:

>100_bases
GGTTCAATCATGTCCTCTTCACAAGAGTTTACGCACGAAGTAGAAACTGGGCTGCGAGAGCGTTTTTTTCCTATCCCTCC
ACAAAAAATCGAGGCTTATT

Downstream 100 bases:

>100_bases
TGATGAGTGCATAGCTGGCTAAACCGATCTCATCCGCTCAGATCATGCAGTCACCCGATTAGCCATACCCATAAATACAA
CGCCAAAATCACGTGGGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 99

Protein sequence:

>100_residues
MSYILQVDFPYTGPWGNEMTKAMEGLARSIAEEPGLIWKIWTVNETTNEAGGIYLFSDISAAKAYLAMHTARLKSFGIPH
VNGKIFLVNEALSQLDRAPI

Sequences:

>Translated_100_residues
MSYILQVDFPYTGPWGNEMTKAMEGLARSIAEEPGLIWKIWTVNETTNEAGGIYLFSDISAAKAYLAMHTARLKSFGIPH
VNGKIFLVNEALSQLDRAPI
>Mature_99_residues
SYILQVDFPYTGPWGNEMTKAMEGLARSIAEEPGLIWKIWTVNETTNEAGGIYLFSDISAAKAYLAMHTARLKSFGIPHV
NGKIFLVNEALSQLDRAPI

Specific function: May function as monoxygenase and play a role in the metabolism of aromatic compounds (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787956, Length=100, Percent_Identity=50, Blast_Score=112, Evalue=4e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR014910 [H]

Pfam domain/function: PF08803 ydhR [H]

EC number: NA

Molecular weight: Translated: 11089; Mature: 10958

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYILQVDFPYTGPWGNEMTKAMEGLARSIAEEPGLIWKIWTVNETTNEAGGIYLFSDIS
CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEECCH
AAKAYLAMHTARLKSFGIPHVNGKIFLVNEALSQLDRAPI
HHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHCCCCC
>Mature Secondary Structure 
SYILQVDFPYTGPWGNEMTKAMEGLARSIAEEPGLIWKIWTVNETTNEAGGIYLFSDIS
CEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEECCH
AAKAYLAMHTARLKSFGIPHVNGKIFLVNEALSQLDRAPI
HHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9023191; 9278503; 10493123 [H]