| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218927819
Identifier: 218927819
GI number: 218927819
Start: 686855
End: 687301
Strand: Direct
Name: 218927819
Synonym: YPO0625
Alternate gene names: NA
Gene position: 686855-687301 (Clockwise)
Preceding gene: 218927818
Following gene: 218927820
Centisome position: 14.76
GC content: 34.68
Gene sequence:
>447_bases ATGGTTAACATGATGGAATGTATCACTGTTAGTGATGTAATCAATGTTTCTGTGGAAGAAGTCTGGAAGAAAATAAGCGC TTTTGATGAATTTTCAGATTATCATCCTGGTGCTGTTCGTAGTTTTTATCTTCATCAGGCTGCTGATCAACAAGGTAGTA TTCGGCGAGTTGAAATGTCTGATGGATACGTCGAAGAGTTATTAGTCAATATAGACCCAAAAAATTATCATCTTGAATAC TCTATATTGAAAAGCTCATTTCCTTTGGATGGATACAGTGCAGAAATAAAACTTATTCCTGTGACTCAGGATAATAGAAC TTTTATACAATGGAACGTGTCCTTTACAACAACACATCCATCCCCAGAGGCTCTTGTTGCTGAAATCAAAAATAATGTAC TTATCGCAGGAATAAATGGTCTTAATGATTATTTTTCAAAAAGTTAG
Upstream 100 bases:
>100_bases ACTTTTCGTCGTGATGTCATTCTCGATCATCGTTGGTTGGGGGCGTAGCTTTGAAAGTAAAGATGGTTCATTAGTCAAGA GTCTCCCCCTAAATTAATGG
Downstream 100 bases:
>100_bases AAGGTGAAATCTAACGTCACTAGCAAAAAGTAATAATAAAATGTTATTATGATAATAAATAATATCGCCATTTTAATGGG TTTTAAATTAAAAAGTGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MVNMMECITVSDVINVSVEEVWKKISAFDEFSDYHPGAVRSFYLHQAADQQGSIRRVEMSDGYVEELLVNIDPKNYHLEY SILKSSFPLDGYSAEIKLIPVTQDNRTFIQWNVSFTTTHPSPEALVAEIKNNVLIAGINGLNDYFSKS
Sequences:
>Translated_148_residues MVNMMECITVSDVINVSVEEVWKKISAFDEFSDYHPGAVRSFYLHQAADQQGSIRRVEMSDGYVEELLVNIDPKNYHLEY SILKSSFPLDGYSAEIKLIPVTQDNRTFIQWNVSFTTTHPSPEALVAEIKNNVLIAGINGLNDYFSKS >Mature_148_residues MVNMMECITVSDVINVSVEEVWKKISAFDEFSDYHPGAVRSFYLHQAADQQGSIRRVEMSDGYVEELLVNIDPKNYHLEY SILKSSFPLDGYSAEIKLIPVTQDNRTFIQWNVSFTTTHPSPEALVAEIKNNVLIAGINGLNDYFSKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16783; Mature: 16783
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNMMECITVSDVINVSVEEVWKKISAFDEFSDYHPGAVRSFYLHQAADQQGSIRRVEMS CCCHHHHEEHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEECC DGYVEELLVNIDPKNYHLEYSILKSSFPLDGYSAEIKLIPVTQDNRTFIQWNVSFTTTHP CCCHHEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEECCC SPEALVAEIKNNVLIAGINGLNDYFSKS CHHHHHHHHCCCEEEEEECCCCHHHCCC >Mature Secondary Structure MVNMMECITVSDVINVSVEEVWKKISAFDEFSDYHPGAVRSFYLHQAADQQGSIRRVEMS CCCHHHHEEHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEECC DGYVEELLVNIDPKNYHLEYSILKSSFPLDGYSAEIKLIPVTQDNRTFIQWNVSFTTTHP CCCHHEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEECCC SPEALVAEIKNNVLIAGINGLNDYFSKS CHHHHHHHHCCCEEEEEECCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA