| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is terX [H]
Identifier: 218927793
GI number: 218927793
Start: 645559
End: 646200
Strand: Reverse
Name: terX [H]
Synonym: YPO0596
Alternate gene names: 218927793
Gene position: 646200-645559 (Counterclockwise)
Preceding gene: 218927794
Following gene: 218927792
Centisome position: 13.89
GC content: 44.24
Gene sequence:
>642_bases ATGTCAGTCAGTTTGCATAAAGGACAAGGCGTTAGTTTACGTAAAAATGAATATGATCTCTCCTCAGTCACCATCGGTCT TGGCTGGGATATCAACGAAGAGAAAAAAGGTATTCTGGGCAGCCTGTTTGGCAAGAAAGAGGAAGAGTATGACCTTGATG TCATCGCATTCTTGTGTAACGCCCAAGGGAAAGTGACTGACTTAGGTAATGTAGAAAATGGCAAACCCAGTCTGGTTAAT GGCGATATTATCTTCTTCAATAGCCTTCGCCATAAGTCTGGGCAAATCTGGCTGACCGGCGATAACAGAACGGGCGCTGG GGATGGCGATGATGAGCAAATTATCGTTAAGCTGAATACTCTTGATCCTAAATACGAAAAAATTGTATTCATCGTACAGA TTTATAATGGCAGCAAGCTGCAACAGCATTTTGGCAAGGTACAGAATGCCTTCATCAGAGCCGTAGACGCCAAGAATATT GAAATGGCTCGCTTCAACCTCTCCGGTGGCCCCGCCTTTAATCAACAGTGTTCAATGCTATTTGCTGAACTGGTCCGTGA AAGTACAGGCTGGAAACTGAATGCCATTGGTGAGCCTTCTGATTCTGACACCTTTGTCACTCATCTTAAGAACTACCTCT GA
Upstream 100 bases:
>100_bases GTAAAAAAGAGGTTATTGGCCTTGATGATTTACCACCACCACCACCGGAAGTGAATGTTGTCTTATAACGTTGCTCTATA AAAATAAATAAGGAAATTCT
Downstream 100 bases:
>100_bases TATGAGAAGGCTACCCGTTTATTTGCTGATTGACACCTCTGGGTCAATGCGCGGTGAATCCATCCATGCCGTCAATGTTG GCATTCAGGCGATGATGAGC
Product: putative tellurium resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MSVSLHKGQGVSLRKNEYDLSSVTIGLGWDINEEKKGILGSLFGKKEEEYDLDVIAFLCNAQGKVTDLGNVENGKPSLVN GDIIFFNSLRHKSGQIWLTGDNRTGAGDGDDEQIIVKLNTLDPKYEKIVFIVQIYNGSKLQQHFGKVQNAFIRAVDAKNI EMARFNLSGGPAFNQQCSMLFAELVRESTGWKLNAIGEPSDSDTFVTHLKNYL
Sequences:
>Translated_213_residues MSVSLHKGQGVSLRKNEYDLSSVTIGLGWDINEEKKGILGSLFGKKEEEYDLDVIAFLCNAQGKVTDLGNVENGKPSLVN GDIIFFNSLRHKSGQIWLTGDNRTGAGDGDDEQIIVKLNTLDPKYEKIVFIVQIYNGSKLQQHFGKVQNAFIRAVDAKNI EMARFNLSGGPAFNQQCSMLFAELVRESTGWKLNAIGEPSDSDTFVTHLKNYL >Mature_212_residues SVSLHKGQGVSLRKNEYDLSSVTIGLGWDINEEKKGILGSLFGKKEEEYDLDVIAFLCNAQGKVTDLGNVENGKPSLVNG DIIFFNSLRHKSGQIWLTGDNRTGAGDGDDEQIIVKLNTLDPKYEKIVFIVQIYNGSKLQQHFGKVQNAFIRAVDAKNIE MARFNLSGGPAFNQQCSMLFAELVRESTGWKLNAIGEPSDSDTFVTHLKNYL
Specific function: Not known; seems to contribute to the tellurium resistance (Ter) mechanism. Also involved in phage inhibition (Phi) and colicin resistance (PacB) [H]
COG id: COG2310
COG function: function code T; Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CAPAB/TerDEXZ family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019303 - InterPro: IPR003325 [H]
Pfam domain/function: PF10138 Tellurium_res; PF02342 TerD [H]
EC number: NA
Molecular weight: Translated: 23604; Mature: 23473
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSLHKGQGVSLRKNEYDLSSVTIGLGWDINEEKKGILGSLFGKKEEEYDLDVIAFLCN CCCCCCCCCCCEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEC AQGKVTDLGNVENGKPSLVNGDIIFFNSLRHKSGQIWLTGDNRTGAGDGDDEQIIVKLNT CCCCEEECCCCCCCCCCEEECCEEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEC LDPKYEKIVFIVQIYNGSKLQQHFGKVQNAFIRAVDAKNIEMARFNLSGGPAFNQQCSML CCCCCEEEEEEEEEECCCHHHHHHHHHHHHHEEEECCCCEEEEEEECCCCCCCCHHHHHH FAELVRESTGWKLNAIGEPSDSDTFVTHLKNYL HHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCC >Mature Secondary Structure SVSLHKGQGVSLRKNEYDLSSVTIGLGWDINEEKKGILGSLFGKKEEEYDLDVIAFLCN CCCCCCCCCCEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEC AQGKVTDLGNVENGKPSLVNGDIIFFNSLRHKSGQIWLTGDNRTGAGDGDDEQIIVKLNT CCCCEEECCCCCCCCCCEEECCEEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEC LDPKYEKIVFIVQIYNGSKLQQHFGKVQNAFIRAVDAKNIEMARFNLSGGPAFNQQCSML CCCCCEEEEEEEEEECCCHHHHHHHHHHHHHEEEECCCCEEEEEEECCCCCCCCHHHHHH FAELVRESTGWKLNAIGEPSDSDTFVTHLKNYL HHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA