| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is uxaC [H]
Identifier: 218927776
GI number: 218927776
Start: 622807
End: 624216
Strand: Direct
Name: uxaC [H]
Synonym: YPO0579
Alternate gene names: 218927776
Gene position: 622807-624216 (Clockwise)
Preceding gene: 218927775
Following gene: 218927777
Centisome position: 13.38
GC content: 50.92
Gene sequence:
>1410_bases ATGTCGCAGTTTTTGACCGAAGACTTTTTGCTGGACACCGAGTTCGCCCGTCGTCTCTACCATGACTATGCAAAAGATCA GCCGATCTTTGATTATCACTGCCATTTGCCGCCAGAACAGATCGCCGAAAACTACCGTTTTAAGAACATGTATGACATCT GGTTGAAAGGTGACCACTATAAATGGCGAGCCATGCGGACCAACGGTGTTGCTGAGCGTCTGTGCACCGGCGATGCCAGT GATCGTGAGAAGTTCGATGCTTGGGCTGCGACGGTTCCTCACACTATCGGTAACCCGTTGTACCATTGGACGCATCTTGA ATTGCGCCGTCCGTTTGGTATTACCGGTAAGTTATTGTCCCCGGCGACATCTGAAGAGATCTGGCAACGCGGCAACGAAT TATTGGCGCAGGACCCCTTCTCTGCGCGCGGCATTATGCAGCAGATGAATGTCAAAATGGTTGGGACCACTGACGACCCA ATTGATGATCTGCGCCACCACAAAGCGATTGCCGCTGATGGCAGCTTCAACATCAAAGTGTTACCAAGCTGGCGTCCCGA CAAAGCGTTTAATATTGAAGCAGCGGGTTTTAACGATTATATGCAGCGGCTTGAAGCGGCTGCGGATACCTCAATCAGCC GTTTTGCCGATCTGTGCGTGGCATTGAATAAGCGTATGGACCACTTTGCCGCCCACGGTTGTAAAGTCTCTGACCATGCG TTGGATGTGGTGGTATACGGCGAGGCGGATGAAACCACACTGGATGCTATTTTGGCACGCCGTCTGGCTGGCAATCAGCC AAGTACAGAAGAAATTGCGCAGTTTAAAACCGCAGTATTACTGTTCTTGTCTGGTGAATATCATCGTCGTGAATGGGTAC AGCAGTATCACATTGGTGCGCTACGTAATAATAACAGCCGCATGTTTAACCTGGTGGGGCCGGATATCGGCTTTGACTCC ATCAATGACCAACCGCTGGCGCAGCCGCTGTCTCGGCTGTTAGATGCACAGGGTCTGCGCAATGCCCTGCCAAAAACAAT CCTTTACTGCCTGAATCCGCGTGATAACGAAGTGATTGGTACCATGGTCGGCAACTTCCAGGGCGAAGGTGAAGCAGGAA AAATGCAGTTTGGTTCCGGCTGGTGGTTTAACGACCAAAAAGACGGTATGCAGCGCCAGATGACCCAACTTGCTCAGCTT GGTCTATTGAGCCGCTTTGTTGGAATGCTCACTGATAGCCGTAGTTTCTTGTCTTATACCCGCCATGAGTATTTCCGTCG CATTCTTTGCCAGATGATTGGCCGCTGGGTCGCGGACGGTGAAGCACCGGCCGATATTGCGTTACTGGGGGCGATGGTGA AAAACATTTGCTTCGATAATGCGCAGCAATATTTCGCCATCGAACTGTAA
Upstream 100 bases:
>100_bases CAATATCTATAAAAATGCTGGACGATAGATTTAATTGGTGTGATAACTTTGCGATAACAGAAAGCCGTACTCTGAGATGT ACTCATCTGAGGAATCCATA
Downstream 100 bases:
>100_bases TCACTCAAGCAGATTTAATCACTCAATCAATTTTAATAACGGGGCCAATAGTTGGCTCCATATAACTCTAACGTATTGTT TATTTAACGCTTGGCTGCAC
Product: glucuronate isomerase
Products: NA
Alternate protein names: Glucuronate isomerase; Uronic isomerase [H]
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MSQFLTEDFLLDTEFARRLYHDYAKDQPIFDYHCHLPPEQIAENYRFKNMYDIWLKGDHYKWRAMRTNGVAERLCTGDAS DREKFDAWAATVPHTIGNPLYHWTHLELRRPFGITGKLLSPATSEEIWQRGNELLAQDPFSARGIMQQMNVKMVGTTDDP IDDLRHHKAIAADGSFNIKVLPSWRPDKAFNIEAAGFNDYMQRLEAAADTSISRFADLCVALNKRMDHFAAHGCKVSDHA LDVVVYGEADETTLDAILARRLAGNQPSTEEIAQFKTAVLLFLSGEYHRREWVQQYHIGALRNNNSRMFNLVGPDIGFDS INDQPLAQPLSRLLDAQGLRNALPKTILYCLNPRDNEVIGTMVGNFQGEGEAGKMQFGSGWWFNDQKDGMQRQMTQLAQL GLLSRFVGMLTDSRSFLSYTRHEYFRRILCQMIGRWVADGEAPADIALLGAMVKNICFDNAQQYFAIEL
Sequences:
>Translated_469_residues MSQFLTEDFLLDTEFARRLYHDYAKDQPIFDYHCHLPPEQIAENYRFKNMYDIWLKGDHYKWRAMRTNGVAERLCTGDAS DREKFDAWAATVPHTIGNPLYHWTHLELRRPFGITGKLLSPATSEEIWQRGNELLAQDPFSARGIMQQMNVKMVGTTDDP IDDLRHHKAIAADGSFNIKVLPSWRPDKAFNIEAAGFNDYMQRLEAAADTSISRFADLCVALNKRMDHFAAHGCKVSDHA LDVVVYGEADETTLDAILARRLAGNQPSTEEIAQFKTAVLLFLSGEYHRREWVQQYHIGALRNNNSRMFNLVGPDIGFDS INDQPLAQPLSRLLDAQGLRNALPKTILYCLNPRDNEVIGTMVGNFQGEGEAGKMQFGSGWWFNDQKDGMQRQMTQLAQL GLLSRFVGMLTDSRSFLSYTRHEYFRRILCQMIGRWVADGEAPADIALLGAMVKNICFDNAQQYFAIEL >Mature_468_residues SQFLTEDFLLDTEFARRLYHDYAKDQPIFDYHCHLPPEQIAENYRFKNMYDIWLKGDHYKWRAMRTNGVAERLCTGDASD REKFDAWAATVPHTIGNPLYHWTHLELRRPFGITGKLLSPATSEEIWQRGNELLAQDPFSARGIMQQMNVKMVGTTDDPI DDLRHHKAIAADGSFNIKVLPSWRPDKAFNIEAAGFNDYMQRLEAAADTSISRFADLCVALNKRMDHFAAHGCKVSDHAL DVVVYGEADETTLDAILARRLAGNQPSTEEIAQFKTAVLLFLSGEYHRREWVQQYHIGALRNNNSRMFNLVGPDIGFDSI NDQPLAQPLSRLLDAQGLRNALPKTILYCLNPRDNEVIGTMVGNFQGEGEAGKMQFGSGWWFNDQKDGMQRQMTQLAQLG LLSRFVGMLTDSRSFLSYTRHEYFRRILCQMIGRWVADGEAPADIALLGAMVKNICFDNAQQYFAIEL
Specific function: Hexuronate conversion to KDG. [C]
COG id: COG1904
COG function: function code G; Glucuronate isomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the uronate isomerase family [H]
Homologues:
Organism=Escherichia coli, GI2367192, Length=469, Percent_Identity=83.1556503198294, Blast_Score=832, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003766 - InterPro: IPR023177 [H]
Pfam domain/function: PF02614 UxaC [H]
EC number: =5.3.1.12 [H]
Molecular weight: Translated: 53475; Mature: 53344
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQFLTEDFLLDTEFARRLYHDYAKDQPIFDYHCHLPPEQIAENYRFKNMYDIWLKGDHY CCCHHHHHHHHCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHCCCCCCEEEEEEECCCE KWRAMRTNGVAERLCTGDASDREKFDAWAATVPHTIGNPLYHWTHLELRRPFGITGKLLS EEEEECCCHHHHHHHCCCCCCHHHHHHHHHHCCHHHCCCCEEEEEEEEECCCCCCCCCCC PATSEEIWQRGNELLAQDPFSARGIMQQMNVKMVGTTDDPIDDLRHHKAIAADGSFNIKV CCCHHHHHHCCCHHHHCCCCHHHHHHHHCCEEEEECCCCCHHHHHHHHEEECCCCEEEEE LPSWRPDKAFNIEAAGFNDYMQRLEAAADTSISRFADLCVALNKRMDHFAAHGCKVSDHA CCCCCCCCCEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE LDVVVYGEADETTLDAILARRLAGNQPSTEEIAQFKTAVLLFLSGEYHRREWVQQYHIGA EEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHH LRNNNSRMFNLVGPDIGFDSINDQPLAQPLSRLLDAQGLRNALPKTILYCLNPRDNEVIG EECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEE TMVGNFQGEGEAGKMQFGSGWWFNDQKDGMQRQMTQLAQLGLLSRFVGMLTDSRSFLSYT HHHCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH RHEYFRRILCQMIGRWVADGEAPADIALLGAMVKNICFDNAQQYFAIEL HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEC >Mature Secondary Structure SQFLTEDFLLDTEFARRLYHDYAKDQPIFDYHCHLPPEQIAENYRFKNMYDIWLKGDHY CCHHHHHHHHCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHCCCCCCEEEEEEECCCE KWRAMRTNGVAERLCTGDASDREKFDAWAATVPHTIGNPLYHWTHLELRRPFGITGKLLS EEEEECCCHHHHHHHCCCCCCHHHHHHHHHHCCHHHCCCCEEEEEEEEECCCCCCCCCCC PATSEEIWQRGNELLAQDPFSARGIMQQMNVKMVGTTDDPIDDLRHHKAIAADGSFNIKV CCCHHHHHHCCCHHHHCCCCHHHHHHHHCCEEEEECCCCCHHHHHHHHEEECCCCEEEEE LPSWRPDKAFNIEAAGFNDYMQRLEAAADTSISRFADLCVALNKRMDHFAAHGCKVSDHA CCCCCCCCCEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE LDVVVYGEADETTLDAILARRLAGNQPSTEEIAQFKTAVLLFLSGEYHRREWVQQYHIGA EEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHH LRNNNSRMFNLVGPDIGFDSINDQPLAQPLSRLLDAQGLRNALPKTILYCLNPRDNEVIG EECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEE TMVGNFQGEGEAGKMQFGSGWWFNDQKDGMQRQMTQLAQLGLLSRFVGMLTDSRSFLSYT HHHCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH RHEYFRRILCQMIGRWVADGEAPADIALLGAMVKNICFDNAQQYFAIEL HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA