| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218927758
Identifier: 218927758
GI number: 218927758
Start: 608212
End: 608742
Strand: Reverse
Name: 218927758
Synonym: YPO0562
Alternate gene names: NA
Gene position: 608742-608212 (Counterclockwise)
Preceding gene: 218927762
Following gene: 218927741
Centisome position: 13.08
GC content: 48.4
Gene sequence:
>531_bases TTGTCAATGCGTGAAAACCGCCCACAATTATTAGATGTTCTGTTCGATGATGCGGTTGCAGCAGAAAACGGACCGCTACA TAACGTACAACAACGCGCGACTGCACTGTTAAAACTTAACCGTGCGGTAAAAGGATTACTCCCTTCACAATTACAGCCGT GGTGCCGTGTCGCAAACTATCGACAGAGTGTTTTAGTGCTAGAGACAGCGAATGCCAGTTGGTTGATGCGCTTACGTTAC GAACAACCTGCGTTGCTATCCGCACTACGAGCGCAAATTCTACCATCATTGTCTTCAATCGACATCAGGATTAATCCATC GTTAATGGCGAAAGGCCATAACGTGACACAAGATGCCGCAAAATCGCCGCAAGATCGTGTAAAATCACCGCCAGTACGCC ACTTAAGCTTGGAAAGTGCTAAGGAACTAAGAGGATTAGCGAGCCGTAGCCCTGAAAAACTGAGAGTGATCTTGGAACGA CTGGCTGCGTTGGCCGGAGAGGGTGCCAACGCAACCAAGCGTGATAAGTAG
Upstream 100 bases:
>100_bases CGCGACCATCCCCAACAGGAGATGCGGCCAGAAATAACGTCTGCCAAATTGTCGCCAACGATTTAGAATACCGATCACGA GTTTAAAATCCGCCGGAGCC
Downstream 100 bases:
>100_bases CTTACTTTTCTTACTTGAAGTTGCAGCCCTGTTTGCATCAACGGTGCGGTAGCTGTTCCATTCACCCGAATCACTGATTT ACATCAGCTCAGCAGGTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MSMRENRPQLLDVLFDDAVAAENGPLHNVQQRATALLKLNRAVKGLLPSQLQPWCRVANYRQSVLVLETANASWLMRLRY EQPALLSALRAQILPSLSSIDIRINPSLMAKGHNVTQDAAKSPQDRVKSPPVRHLSLESAKELRGLASRSPEKLRVILER LAALAGEGANATKRDK
Sequences:
>Translated_176_residues MSMRENRPQLLDVLFDDAVAAENGPLHNVQQRATALLKLNRAVKGLLPSQLQPWCRVANYRQSVLVLETANASWLMRLRY EQPALLSALRAQILPSLSSIDIRINPSLMAKGHNVTQDAAKSPQDRVKSPPVRHLSLESAKELRGLASRSPEKLRVILER LAALAGEGANATKRDK >Mature_175_residues SMRENRPQLLDVLFDDAVAAENGPLHNVQQRATALLKLNRAVKGLLPSQLQPWCRVANYRQSVLVLETANASWLMRLRYE QPALLSALRAQILPSLSSIDIRINPSLMAKGHNVTQDAAKSPQDRVKSPPVRHLSLESAKELRGLASRSPEKLRVILERL AALAGEGANATKRDK
Specific function: Unknown
COG id: COG4701
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19498; Mature: 19367
Theoretical pI: Translated: 11.03; Mature: 11.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMRENRPQLLDVLFDDAVAAENGPLHNVQQRATALLKLNRAVKGLLPSQLQPWCRVANY CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH RQSVLVLETANASWLMRLRYEQPALLSALRAQILPSLSSIDIRINPSLMAKGHNVTQDAA CCEEEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECHHHHCCCCCCCHHHH KSPQDRVKSPPVRHLSLESAKELRGLASRSPEKLRVILERLAALAGEGANATKRDK CCCHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SMRENRPQLLDVLFDDAVAAENGPLHNVQQRATALLKLNRAVKGLLPSQLQPWCRVANY CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH RQSVLVLETANASWLMRLRYEQPALLSALRAQILPSLSSIDIRINPSLMAKGHNVTQDAA CCEEEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECHHHHCCCCCCCHHHH KSPQDRVKSPPVRHLSLESAKELRGLASRSPEKLRVILERLAALAGEGANATKRDK CCCHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA