Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is 218927715
Identifier: 218927715
GI number: 218927715
Start: 556337
End: 556690
Strand: Direct
Name: 218927715
Synonym: YPO0516
Alternate gene names: NA
Gene position: 556337-556690 (Clockwise)
Preceding gene: 218927714
Following gene: 218927718
Centisome position: 11.95
GC content: 42.66
Gene sequence:
>354_bases ATGCTAGATCCTAAAAACATCCAGAATGTATTGAAGTCATCTACTGACCTTGGTCAGCAATCTCAATCTGATTTGCAGAA ACCTTTTGTAAAAGGAATGCAAAATATGGAGATGTCAGGGGCCGATGCCGCTCGCAGTATCATGCAATCGGTTAATCAAT CCTGCGAAACCATGATGAGCGATATGAATAAGATATTGGGAGGATTGCAGGACAATGTTGATGCTCACCAGAAAATGCAA AGTGAGGAGCGTCCGAAGGACTTCGAGAGAGCCATGAGTGATCTTCGCAGCACACTCTCCAATGGTTTCCCAGAGGAAAT GAAAAGTATGTTTGATAAATTGCCCAAAATGTAG
Upstream 100 bases:
>100_bases TGAGTTGAGTTCCACCATGAAAGATTATCCGCTGTGGTCAAAAGCATTGGCACAGTTCTCATGTCCTAAGAATCTCTAAC CGCGAAATAAGGAAATGCAA
Downstream 100 bases:
>100_bases CGGGCAGTCGTCAGACAAAAAAATATCCGGGGGAATGCCCCGGATATCAGACTGCTGACAAACCCCGATGACTCACTCTT GAACGGTGAGGATAGGCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MLDPKNIQNVLKSSTDLGQQSQSDLQKPFVKGMQNMEMSGADAARSIMQSVNQSCETMMSDMNKILGGLQDNVDAHQKMQ SEERPKDFERAMSDLRSTLSNGFPEEMKSMFDKLPKM
Sequences:
>Translated_117_residues MLDPKNIQNVLKSSTDLGQQSQSDLQKPFVKGMQNMEMSGADAARSIMQSVNQSCETMMSDMNKILGGLQDNVDAHQKMQ SEERPKDFERAMSDLRSTLSNGFPEEMKSMFDKLPKM >Mature_117_residues MLDPKNIQNVLKSSTDLGQQSQSDLQKPFVKGMQNMEMSGADAARSIMQSVNQSCETMMSDMNKILGGLQDNVDAHQKMQ SEERPKDFERAMSDLRSTLSNGFPEEMKSMFDKLPKM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13182; Mature: 13182
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 11.1 %Met (Translated Protein) 12.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 11.1 %Met (Mature Protein) 12.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDPKNIQNVLKSSTDLGQQSQSDLQKPFVKGMQNMEMSGADAARSIMQSVNQSCETMMS CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH DMNKILGGLQDNVDAHQKMQSEERPKDFERAMSDLRSTLSNGFPEEMKSMFDKLPKM HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC >Mature Secondary Structure MLDPKNIQNVLKSSTDLGQQSQSDLQKPFVKGMQNMEMSGADAARSIMQSVNQSCETMMS CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH DMNKILGGLQDNVDAHQKMQSEERPKDFERAMSDLRSTLSNGFPEEMKSMFDKLPKM HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA