Definition Yersinia pestis CO92 chromosome, complete genome.
Accession NC_003143
Length 4,653,728

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The map label for this gene is 218927715

Identifier: 218927715

GI number: 218927715

Start: 556337

End: 556690

Strand: Direct

Name: 218927715

Synonym: YPO0516

Alternate gene names: NA

Gene position: 556337-556690 (Clockwise)

Preceding gene: 218927714

Following gene: 218927718

Centisome position: 11.95

GC content: 42.66

Gene sequence:

>354_bases
ATGCTAGATCCTAAAAACATCCAGAATGTATTGAAGTCATCTACTGACCTTGGTCAGCAATCTCAATCTGATTTGCAGAA
ACCTTTTGTAAAAGGAATGCAAAATATGGAGATGTCAGGGGCCGATGCCGCTCGCAGTATCATGCAATCGGTTAATCAAT
CCTGCGAAACCATGATGAGCGATATGAATAAGATATTGGGAGGATTGCAGGACAATGTTGATGCTCACCAGAAAATGCAA
AGTGAGGAGCGTCCGAAGGACTTCGAGAGAGCCATGAGTGATCTTCGCAGCACACTCTCCAATGGTTTCCCAGAGGAAAT
GAAAAGTATGTTTGATAAATTGCCCAAAATGTAG

Upstream 100 bases:

>100_bases
TGAGTTGAGTTCCACCATGAAAGATTATCCGCTGTGGTCAAAAGCATTGGCACAGTTCTCATGTCCTAAGAATCTCTAAC
CGCGAAATAAGGAAATGCAA

Downstream 100 bases:

>100_bases
CGGGCAGTCGTCAGACAAAAAAATATCCGGGGGAATGCCCCGGATATCAGACTGCTGACAAACCCCGATGACTCACTCTT
GAACGGTGAGGATAGGCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MLDPKNIQNVLKSSTDLGQQSQSDLQKPFVKGMQNMEMSGADAARSIMQSVNQSCETMMSDMNKILGGLQDNVDAHQKMQ
SEERPKDFERAMSDLRSTLSNGFPEEMKSMFDKLPKM

Sequences:

>Translated_117_residues
MLDPKNIQNVLKSSTDLGQQSQSDLQKPFVKGMQNMEMSGADAARSIMQSVNQSCETMMSDMNKILGGLQDNVDAHQKMQ
SEERPKDFERAMSDLRSTLSNGFPEEMKSMFDKLPKM
>Mature_117_residues
MLDPKNIQNVLKSSTDLGQQSQSDLQKPFVKGMQNMEMSGADAARSIMQSVNQSCETMMSDMNKILGGLQDNVDAHQKMQ
SEERPKDFERAMSDLRSTLSNGFPEEMKSMFDKLPKM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13182; Mature: 13182

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
11.1 %Met     (Translated Protein)
12.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
11.1 %Met     (Mature Protein)
12.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDPKNIQNVLKSSTDLGQQSQSDLQKPFVKGMQNMEMSGADAARSIMQSVNQSCETMMS
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
DMNKILGGLQDNVDAHQKMQSEERPKDFERAMSDLRSTLSNGFPEEMKSMFDKLPKM
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MLDPKNIQNVLKSSTDLGQQSQSDLQKPFVKGMQNMEMSGADAARSIMQSVNQSCETMMS
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
DMNKILGGLQDNVDAHQKMQSEERPKDFERAMSDLRSTLSNGFPEEMKSMFDKLPKM
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA