| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218927540
Identifier: 218927540
GI number: 218927540
Start: 344213
End: 344479
Strand: Direct
Name: 218927540
Synonym: YPO0335
Alternate gene names: NA
Gene position: 344213-344479 (Clockwise)
Preceding gene: 218927538
Following gene: 218927542
Centisome position: 7.4
GC content: 41.2
Gene sequence:
>267_bases ATGATGATGATCACAAAATGGCATTCTGGTGGCAGATTGACGGGTTTTATGGCATTAACGGCAGTCAGTCAGCAAAAATT GCGCTGCCCTTGCTCATCCCTGTCACTTAGTGTTGTTGATCTTAAAATAAGTAGTGTTGTTGATCTTAAAATAAATAAGC GCCTGGGGATTAATGAGCTTCCCCATTTGAACAGAATCAATGCTGTTCAAAAGGGTTCCCGCCTACTGGCATCTCGAAGT AACTTAGGTATAAGCCTATTAAGTTAG
Upstream 100 bases:
>100_bases CAAACCGCTGATGACGAAGGAGTCTAAATAGTGTGCAGCCTTGTCACCTTCGGCTGACTGCCTTAGGACAAGGAAAACTG GCAAAATTCAGTAGGTAAGA
Downstream 100 bases:
>100_bases AGGTGATTTAATTTATGTACTGGCCTATACTTTCGGACCGTGCACGAATGAAACTTGTCGTGAATTACTGGTGCTGCTTA CGCCCTTCAATATCGGTATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MMMITKWHSGGRLTGFMALTAVSQQKLRCPCSSLSLSVVDLKISSVVDLKINKRLGINELPHLNRINAVQKGSRLLASRS NLGISLLS
Sequences:
>Translated_88_residues MMMITKWHSGGRLTGFMALTAVSQQKLRCPCSSLSLSVVDLKISSVVDLKINKRLGINELPHLNRINAVQKGSRLLASRS NLGISLLS >Mature_88_residues MMMITKWHSGGRLTGFMALTAVSQQKLRCPCSSLSLSVVDLKISSVVDLKINKRLGINELPHLNRINAVQKGSRLLASRS NLGISLLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9605; Mature: 9605
Theoretical pI: Translated: 11.65; Mature: 11.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMMITKWHSGGRLTGFMALTAVSQQKLRCPCSSLSLSVVDLKISSVVDLKINKRLGINEL CEEEEEECCCCCEEEHHHHHHHCHHHHCCCCCCCEEEEEEEEECEEEEEEECCCCCCCCC PHLNRINAVQKGSRLLASRSNLGISLLS CCCCCCCHHHCCHHHEECCCCCCEEECC >Mature Secondary Structure MMMITKWHSGGRLTGFMALTAVSQQKLRCPCSSLSLSVVDLKISSVVDLKINKRLGINEL CEEEEEECCCCCEEEHHHHHHHCHHHHCCCCCCCEEEEEEEEECEEEEEEECCCCCCCCC PHLNRINAVQKGSRLLASRSNLGISLLS CCCCCCCHHHCCHHHEECCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA