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The map label for this gene is ygaK [H]

Identifier: 218927514

GI number: 218927514

Start: 309654

End: 311711

Strand: Direct

Name: ygaK [H]

Synonym: YPO0308

Alternate gene names: 218927514

Gene position: 309654-311711 (Clockwise)

Preceding gene: 218927513

Following gene: 218927516

Centisome position: 6.65

GC content: 48.06

Gene sequence:

>2058_bases
ATGAAGATTATTGATAAAAATGTCAGTACCTATGAAACGTTACAAAAGGGTTTTAATTTACGTTGGCCACCCAACGTTGA
GCAGGGTGCTGAGACCATTTATATCTGCACGACACCCGATGAAGTTTTTGCCGCCACCAATACTGCGCTAGCTGCAGGAA
ATCGAATCACGGTACGGAGTGGGGGGCACTGTTATGAGGGTTTTGTTTCCAACAAGTTATCTACAGAGAGATTGTCGATC
ATTGATTTAGGCGAGATGAGCGGCCTGGACTACGATGAAGACAAAACGATAACCTCACTTTGGGACGCGAATAAAAATAC
TTATCGCTTCAAGAGTCTGACGGGGAATCAGAATTGGAATGGCTATGTCTCACTCTACAAACGGTCTGGCCGGACGATCC
CCGGCGGGTCATGTTACTCCGTGGGCGTGGGTGGGCACATCAGCGGCGGTGGCTATGGATTACTCTCACGTCTGCATGGG
TTAACAGTGGATTGGGTCACTGGTGTTGATATTTTGGTGCCGGTCGGGAACGCGCATCGGCTGGCATTTCGACATGTGCG
CGCTGATAGTGTGTCTGAGGTAGACAGAGAGCTATTAATGGCTTGCTGTGGCGCTGGCGGTGGGAATTTCGGCATCATTA
TCGCCTATTATTTCGATGATCTTCCCAAAGCACCTCAGAAAGCCTATTGGATACCCCTAACGTACCCATGGTCATCTTTA
AAAGCGACATTCCCCGCCTTTTTAAAAGCTTATTGGCAATGGTTTGCTGACAATGATGTTAATGCGACCAGTACGAAGGA
GGGCGTCGGTAATGGCGGGTTATTTACTTTACTGAAATTAAACCATATCGATGCGTCCGATAATGTCGTGTTGGCCATTC
AATACACGGGTCCAAATGGTCAAGTCGGGGGCGCGAATGATATTCCTCTCAATGACTTTATCGAAAAAATGAATGCCGCG
GCTGGCATGACACCGACGATATATGATGATTTTATTTTGCCAAACATCCCGCCGTTTAAGCACTTGTACCCAGGTCGAAA
AATCGGGCGTACTGTGGATGAAAGTGCCTCCATGGATTGGTTGCATGTGACTCAAATGATCAATGGGTCAGGCAGTAATC
AGCGTGGAAAATATAAATCTGACTACCAAATCAAGCAGTTTTCAGACGAGATGTGCCATGCCTTGCTGACACACTTGACT
ACCGCCACAGCTGATAAGCGTTTCAATCAGTCGCTGGTACAAATTGATTCCTATGGTGGGGCGATCAACAGCCGTGGCAT
CGGGGCAACAGCTGTGTCTCAAAGGAACTCGCTGCTCAAAGCGCAATACCAGACTTATTGGACGAATGAAGCCGATGACC
AGACGCACTTAACATGGATCCGCAATATTTATGCGGCAGTGCATAATGGCAAACCTGCTCCTCCTGAGTTCGAGGGATGC
TATATCAATTATCCCGATATCGACATGAAATACACCGATTCAGGTGAGGAAGATCCAAATTGGTTGAATCTGTACTATGG
CTGGGATACGCAATTGATCAAGAGGTTGATTGCGCTAAAAGCGAGAATCGATCCTAACAATATTTTTCACCATGAACTGT
CTATCCCATTAGTGACAGAATTACCTAAAGCCCCGGTTAATCTCCACAGCACGGGGCAAACGACAACCAGTATTAGTCTC
ATGTGGGGGAGCTCGATAGGGGCATTACCTGTTGCCAGCTATGCCATTTACCGCGATGGTCATGAAGTGAAACTTCTGAA
CGGAACCCAGACTTCAGCAGAAGATGCCGGTTTGCAACCAAATACGGAGTACCGCTATTTTGTTGCCGCAGGCGATGAAC
ATGGCAACCTGTCAGTGCCCAGCAATGTACTGACGGTGAGCACCCAAGGCACACACCCGGCATGGGTACTGAATGGGAGT
TACGCTGTTGGTGATGTGGTAAGCAATCTGGGTAAACTCTGGCGCTGTATTCAGTCGCACGTAGCCTATGATCCATTATG
GGCTCCGGGGACTAACGGTGGTATTACGCTATGGGCGGGGTATACCGCAGGTCGTTAA

Upstream 100 bases:

>100_bases
GCGGGTCCCACTATCGTTAATGCAAAAAAAATCAGAACGGCTGCTTTAGCGTATAGGTTAGTTTCAGGACTGTTCTCTGT
ATATCGACAGGGGTTAACCG

Downstream 100 bases:

>100_bases
TCCAACAGGAGGTGCCGAGAGGCACCTCAGACTGCTGACAAACCCCGATGACGCGATCTTGAACGGTGAGGATAGGCAGA
GGAGTAAAGCGTCCGCGCCA

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 685; Mature: 685

Protein sequence:

>685_residues
MKIIDKNVSTYETLQKGFNLRWPPNVEQGAETIYICTTPDEVFAATNTALAAGNRITVRSGGHCYEGFVSNKLSTERLSI
IDLGEMSGLDYDEDKTITSLWDANKNTYRFKSLTGNQNWNGYVSLYKRSGRTIPGGSCYSVGVGGHISGGGYGLLSRLHG
LTVDWVTGVDILVPVGNAHRLAFRHVRADSVSEVDRELLMACCGAGGGNFGIIIAYYFDDLPKAPQKAYWIPLTYPWSSL
KATFPAFLKAYWQWFADNDVNATSTKEGVGNGGLFTLLKLNHIDASDNVVLAIQYTGPNGQVGGANDIPLNDFIEKMNAA
AGMTPTIYDDFILPNIPPFKHLYPGRKIGRTVDESASMDWLHVTQMINGSGSNQRGKYKSDYQIKQFSDEMCHALLTHLT
TATADKRFNQSLVQIDSYGGAINSRGIGATAVSQRNSLLKAQYQTYWTNEADDQTHLTWIRNIYAAVHNGKPAPPEFEGC
YINYPDIDMKYTDSGEEDPNWLNLYYGWDTQLIKRLIALKARIDPNNIFHHELSIPLVTELPKAPVNLHSTGQTTTSISL
MWGSSIGALPVASYAIYRDGHEVKLLNGTQTSAEDAGLQPNTEYRYFVAAGDEHGNLSVPSNVLTVSTQGTHPAWVLNGS
YAVGDVVSNLGKLWRCIQSHVAYDPLWAPGTNGGITLWAGYTAGR

Sequences:

>Translated_685_residues
MKIIDKNVSTYETLQKGFNLRWPPNVEQGAETIYICTTPDEVFAATNTALAAGNRITVRSGGHCYEGFVSNKLSTERLSI
IDLGEMSGLDYDEDKTITSLWDANKNTYRFKSLTGNQNWNGYVSLYKRSGRTIPGGSCYSVGVGGHISGGGYGLLSRLHG
LTVDWVTGVDILVPVGNAHRLAFRHVRADSVSEVDRELLMACCGAGGGNFGIIIAYYFDDLPKAPQKAYWIPLTYPWSSL
KATFPAFLKAYWQWFADNDVNATSTKEGVGNGGLFTLLKLNHIDASDNVVLAIQYTGPNGQVGGANDIPLNDFIEKMNAA
AGMTPTIYDDFILPNIPPFKHLYPGRKIGRTVDESASMDWLHVTQMINGSGSNQRGKYKSDYQIKQFSDEMCHALLTHLT
TATADKRFNQSLVQIDSYGGAINSRGIGATAVSQRNSLLKAQYQTYWTNEADDQTHLTWIRNIYAAVHNGKPAPPEFEGC
YINYPDIDMKYTDSGEEDPNWLNLYYGWDTQLIKRLIALKARIDPNNIFHHELSIPLVTELPKAPVNLHSTGQTTTSISL
MWGSSIGALPVASYAIYRDGHEVKLLNGTQTSAEDAGLQPNTEYRYFVAAGDEHGNLSVPSNVLTVSTQGTHPAWVLNGS
YAVGDVVSNLGKLWRCIQSHVAYDPLWAPGTNGGITLWAGYTAGR
>Mature_685_residues
MKIIDKNVSTYETLQKGFNLRWPPNVEQGAETIYICTTPDEVFAATNTALAAGNRITVRSGGHCYEGFVSNKLSTERLSI
IDLGEMSGLDYDEDKTITSLWDANKNTYRFKSLTGNQNWNGYVSLYKRSGRTIPGGSCYSVGVGGHISGGGYGLLSRLHG
LTVDWVTGVDILVPVGNAHRLAFRHVRADSVSEVDRELLMACCGAGGGNFGIIIAYYFDDLPKAPQKAYWIPLTYPWSSL
KATFPAFLKAYWQWFADNDVNATSTKEGVGNGGLFTLLKLNHIDASDNVVLAIQYTGPNGQVGGANDIPLNDFIEKMNAA
AGMTPTIYDDFILPNIPPFKHLYPGRKIGRTVDESASMDWLHVTQMINGSGSNQRGKYKSDYQIKQFSDEMCHALLTHLT
TATADKRFNQSLVQIDSYGGAINSRGIGATAVSQRNSLLKAQYQTYWTNEADDQTHLTWIRNIYAAVHNGKPAPPEFEGC
YINYPDIDMKYTDSGEEDPNWLNLYYGWDTQLIKRLIALKARIDPNNIFHHELSIPLVTELPKAPVNLHSTGQTTTSISL
MWGSSIGALPVASYAIYRDGHEVKLLNGTQTSAEDAGLQPNTEYRYFVAAGDEHGNLSVPSNVLTVSTQGTHPAWVLNGS
YAVGDVVSNLGKLWRCIQSHVAYDPLWAPGTNGGITLWAGYTAGR

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012951
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016168
- InterPro:   IPR006094 [H]

Pfam domain/function: PF08031 BBE; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 75267; Mature: 75267

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: PS50853 FN3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIDKNVSTYETLQKGFNLRWPPNVEQGAETIYICTTPDEVFAATNTALAAGNRITVRS
CCEECCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHCCCCEEECCCEEEEEC
GGHCYEGFVSNKLSTERLSIIDLGEMSGLDYDEDKTITSLWDANKNTYRFKSLTGNQNWN
CCCEEHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHCCCCCEEEEEEECCCCCCC
GYVSLYKRSGRTIPGGSCYSVGVGGHISGGGYGLLSRLHGLTVDWVTGVDILVPVGNAHR
EEEEEEECCCCCCCCCCEEEECCCCEECCCHHHHHHHHCCCEEEEECCCEEEEECCCCCE
LAFRHVRADSVSEVDRELLMACCGAGGGNFGIIIAYYFDDLPKAPQKAYWIPLTYPWSSL
EEEEHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCEEEEEEECCHHHH
KATFPAFLKAYWQWFADNDVNATSTKEGVGNGGLFTLLKLNHIDASDNVVLAIQYTGPNG
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEECCCC
QVGGANDIPLNDFIEKMNAAAGMTPTIYDDFILPNIPPFKHLYPGRKIGRTVDESASMDW
CCCCCCCCCHHHHHHHHHHHCCCCCCHHCCCCCCCCCCHHHCCCCHHHCCCCCCCCCCCC
LHVTQMINGSGSNQRGKYKSDYQIKQFSDEMCHALLTHLTTATADKRFNQSLVQIDSYGG
EEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCC
AINSRGIGATAVSQRNSLLKAQYQTYWTNEADDQTHLTWIRNIYAAVHNGKPAPPEFEGC
CCCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCE
YINYPDIDMKYTDSGEEDPNWLNLYYGWDTQLIKRLIALKARIDPNNIFHHELSIPLVTE
EEECCCCCEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCCHHHC
LPKAPVNLHSTGQTTTSISLMWGSSIGALPVASYAIYRDGHEVKLLNGTQTSAEDAGLQP
CCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHEEEEEECCCEEEEEECCCCCHHHCCCCC
NTEYRYFVAAGDEHGNLSVPSNVLTVSTQGTHPAWVLNGSYAVGDVVSNLGKLWRCIQSH
CCCEEEEEEECCCCCCEECCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
VAYDPLWAPGTNGGITLWAGYTAGR
CCCCCCCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MKIIDKNVSTYETLQKGFNLRWPPNVEQGAETIYICTTPDEVFAATNTALAAGNRITVRS
CCEECCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHCCCCEEECCCEEEEEC
GGHCYEGFVSNKLSTERLSIIDLGEMSGLDYDEDKTITSLWDANKNTYRFKSLTGNQNWN
CCCEEHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHCCCCCEEEEEEECCCCCCC
GYVSLYKRSGRTIPGGSCYSVGVGGHISGGGYGLLSRLHGLTVDWVTGVDILVPVGNAHR
EEEEEEECCCCCCCCCCEEEECCCCEECCCHHHHHHHHCCCEEEEECCCEEEEECCCCCE
LAFRHVRADSVSEVDRELLMACCGAGGGNFGIIIAYYFDDLPKAPQKAYWIPLTYPWSSL
EEEEHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCEEEEEEECCHHHH
KATFPAFLKAYWQWFADNDVNATSTKEGVGNGGLFTLLKLNHIDASDNVVLAIQYTGPNG
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEECCCC
QVGGANDIPLNDFIEKMNAAAGMTPTIYDDFILPNIPPFKHLYPGRKIGRTVDESASMDW
CCCCCCCCCHHHHHHHHHHHCCCCCCHHCCCCCCCCCCHHHCCCCHHHCCCCCCCCCCCC
LHVTQMINGSGSNQRGKYKSDYQIKQFSDEMCHALLTHLTTATADKRFNQSLVQIDSYGG
EEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCC
AINSRGIGATAVSQRNSLLKAQYQTYWTNEADDQTHLTWIRNIYAAVHNGKPAPPEFEGC
CCCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCE
YINYPDIDMKYTDSGEEDPNWLNLYYGWDTQLIKRLIALKARIDPNNIFHHELSIPLVTE
EEECCCCCEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCCHHHC
LPKAPVNLHSTGQTTTSISLMWGSSIGALPVASYAIYRDGHEVKLLNGTQTSAEDAGLQP
CCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHEEEEEECCCEEEEEECCCCCHHHCCCCC
NTEYRYFVAAGDEHGNLSVPSNVLTVSTQGTHPAWVLNGSYAVGDVVSNLGKLWRCIQSH
CCCEEEEEEECCCCCCEECCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
VAYDPLWAPGTNGGITLWAGYTAGR
CCCCCCCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202460; 9384377 [H]