| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218927512
Identifier: 218927512
GI number: 218927512
Start: 307245
End: 308645
Strand: Direct
Name: 218927512
Synonym: YPO0306
Alternate gene names: NA
Gene position: 307245-308645 (Clockwise)
Preceding gene: 218927511
Following gene: 218927513
Centisome position: 6.6
GC content: 52.68
Gene sequence:
>1401_bases TTGTCAGTGATTGATCACTTGGAACGGCCTCTGATACCCAGGCGCTATCCGCCTAACGAATTGATTATCATGGAGGATAA TATGATGCATACAGAAAACAATTCCCCCTCAGGTTTGATCCCGTTGCCCGATTGGTATCCGGTTGCTTTTTCGCATCTGG ATGCGATGGAGTACGCGAGTGTGACGCGGCTTTGGCACCATGAACCCGTGCTGCGTGATCTGGTAGACGAGCTGGATAAA CGTAATCCGGGGCTGATTACGTTTACGCATTGCCCACATTGTCACAGTGCCGATATTTGCCCCGGCACCCGCCCGGAAGA GTACCGCTGTCGAACCTGCCATCGGTGCAGTTCTCCGTATACGCATACCCCGTTTTTCGATTTACACCATGCCCGACATT CACGGCTCTATGCGGTACTGGTGACCCTCTGGGGAACCTGGCAAGTGGAGGACGCTGCCTGGTTAAGTGACTGCAAATCC AAACAGATATGGAAGCAGTACTGCCATCGGCTAAAACCCATTCTGGCGTTGATCGGCGGCCGTGCGGTAACCCATACACC TCGCTACTTGCGGGGTTTTACACCGGGGCAGCAGGGGTTGCACTGCCCAGCCTGCGCCTCCACGCAATTGGTCTACAGCG AAACCATGCCAGTAGGTAATCCCGAGGTACACTGTCAGGTTTGCCAGACTGATTTTGTGATGTATCCCGACATTCCAAAA GGCATCGACCCGTTTGCAGTCAATACGCCACAGTATGACATCCCGCTTCCCCGCTGGTTCAGCCGCTTGTTTTCTCATGC GAGCCAGGCACAGTACCAACATTTACGGGAGGTCTGGCAACGGGAACCGGTACTGAGAGAGGCTGTGGATCGGCTGGATG CACAAAATCCTGAACAGGGTGCGGTGTATGCCTGCCCTTACTGCCAGAATAAGCACATCAGCCCACGTAAAACAGCCTCA TCTATTGAGGGGTATTATTGCCCCGCCTGTGATAATCCATTTACGGCCACTACCGGGACGGTATTTACCCGGATGCGTCA GGAGCATTTTTGGCGTTTGTATGCGGTATTGGTGATGCTATGGACACAGTGGCGACCAACACAGATTTTTGAGCTATGTC AGTTACGTTCAGTGCACCCCTTTCTGACTTACCATAAACGGCTCGCTCCGCTACTGGCTGAGTTTGATGGTGCCCCGATC ACGCCATATCCCCGTAATTTACTGGGGTTCACCCCCGGGCAGCAGGGGGTTTGCTGCGTGTATTGCCAATCGACAAAGCT GATAACGGAAGGGATAACGGTCATGCCACTGGATAACCCCTATATCTGTTGTCTGGACTGTGGACAGCGATTTATGCTGC GGGTCTGGCGAAAACAGGTAAAAAGTAACGAGAAAAAATAA
Upstream 100 bases:
>100_bases ATGCCGCAACATCAAGATGTCTTCGTTATATGAAATATTAATGTAAAAATTTAGCGGTGGGCTGGCGCTATATCAGGCCG GTGATGTCGAGAAATAAGTT
Downstream 100 bases:
>100_bases ATCCCAAAGAGATGGCTTGCTATTTTAAAAATGAATTTATTATTATTGATAAAATAACAAGCCAGCAAGGGATTGAAAAG TATGTTATTTGATTGTTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 466; Mature: 465
Protein sequence:
>466_residues MSVIDHLERPLIPRRYPPNELIIMEDNMMHTENNSPSGLIPLPDWYPVAFSHLDAMEYASVTRLWHHEPVLRDLVDELDK RNPGLITFTHCPHCHSADICPGTRPEEYRCRTCHRCSSPYTHTPFFDLHHARHSRLYAVLVTLWGTWQVEDAAWLSDCKS KQIWKQYCHRLKPILALIGGRAVTHTPRYLRGFTPGQQGLHCPACASTQLVYSETMPVGNPEVHCQVCQTDFVMYPDIPK GIDPFAVNTPQYDIPLPRWFSRLFSHASQAQYQHLREVWQREPVLREAVDRLDAQNPEQGAVYACPYCQNKHISPRKTAS SIEGYYCPACDNPFTATTGTVFTRMRQEHFWRLYAVLVMLWTQWRPTQIFELCQLRSVHPFLTYHKRLAPLLAEFDGAPI TPYPRNLLGFTPGQQGVCCVYCQSTKLITEGITVMPLDNPYICCLDCGQRFMLRVWRKQVKSNEKK
Sequences:
>Translated_466_residues MSVIDHLERPLIPRRYPPNELIIMEDNMMHTENNSPSGLIPLPDWYPVAFSHLDAMEYASVTRLWHHEPVLRDLVDELDK RNPGLITFTHCPHCHSADICPGTRPEEYRCRTCHRCSSPYTHTPFFDLHHARHSRLYAVLVTLWGTWQVEDAAWLSDCKS KQIWKQYCHRLKPILALIGGRAVTHTPRYLRGFTPGQQGLHCPACASTQLVYSETMPVGNPEVHCQVCQTDFVMYPDIPK GIDPFAVNTPQYDIPLPRWFSRLFSHASQAQYQHLREVWQREPVLREAVDRLDAQNPEQGAVYACPYCQNKHISPRKTAS SIEGYYCPACDNPFTATTGTVFTRMRQEHFWRLYAVLVMLWTQWRPTQIFELCQLRSVHPFLTYHKRLAPLLAEFDGAPI TPYPRNLLGFTPGQQGVCCVYCQSTKLITEGITVMPLDNPYICCLDCGQRFMLRVWRKQVKSNEKK >Mature_465_residues SVIDHLERPLIPRRYPPNELIIMEDNMMHTENNSPSGLIPLPDWYPVAFSHLDAMEYASVTRLWHHEPVLRDLVDELDKR NPGLITFTHCPHCHSADICPGTRPEEYRCRTCHRCSSPYTHTPFFDLHHARHSRLYAVLVTLWGTWQVEDAAWLSDCKSK QIWKQYCHRLKPILALIGGRAVTHTPRYLRGFTPGQQGLHCPACASTQLVYSETMPVGNPEVHCQVCQTDFVMYPDIPKG IDPFAVNTPQYDIPLPRWFSRLFSHASQAQYQHLREVWQREPVLREAVDRLDAQNPEQGAVYACPYCQNKHISPRKTASS IEGYYCPACDNPFTATTGTVFTRMRQEHFWRLYAVLVMLWTQWRPTQIFELCQLRSVHPFLTYHKRLAPLLAEFDGAPIT PYPRNLLGFTPGQQGVCCVYCQSTKLITEGITVMPLDNPYICCLDCGQRFMLRVWRKQVKSNEKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53954; Mature: 53822
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: PS00028 ZINC_FINGER_C2H2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVIDHLERPLIPRRYPPNELIIMEDNMMHTENNSPSGLIPLPDWYPVAFSHLDAMEYAS CCHHHHHHCCCCCCCCCCCCEEEEECCEEECCCCCCCCEEECCCCHHHHHHHHHHHHHHH VTRLWHHEPVLRDLVDELDKRNPGLITFTHCPHCHSADICPGTRPEEYRCRTCHRCSSPY HHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC THTPFFDLHHARHSRLYAVLVTLWGTWQVEDAAWLSDCKSKQIWKQYCHRLKPILALIGG CCCCCHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RAVTHTPRYLRGFTPGQQGLHCPACASTQLVYSETMPVGNPEVHCQVCQTDFVMYPDIPK CHHCCCCHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCEEECCCCCC GIDPFAVNTPQYDIPLPRWFSRLFSHASQAQYQHLREVWQREPVLREAVDRLDAQNPEQG CCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC AVYACPYCQNKHISPRKTASSIEGYYCPACDNPFTATTGTVFTRMRQEHFWRLYAVLVML CEEECCCCCCCCCCCHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH WTQWRPTQIFELCQLRSVHPFLTYHKRLAPLLAEFDGAPITPYPRNLLGFTPGQQGVCCV HCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCEEEE YCQSTKLITEGITVMPLDNPYICCLDCGQRFMLRVWRKQVKSNEKK EECCCEEHHCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SVIDHLERPLIPRRYPPNELIIMEDNMMHTENNSPSGLIPLPDWYPVAFSHLDAMEYAS CHHHHHHCCCCCCCCCCCCEEEEECCEEECCCCCCCCEEECCCCHHHHHHHHHHHHHHH VTRLWHHEPVLRDLVDELDKRNPGLITFTHCPHCHSADICPGTRPEEYRCRTCHRCSSPY HHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC THTPFFDLHHARHSRLYAVLVTLWGTWQVEDAAWLSDCKSKQIWKQYCHRLKPILALIGG CCCCCHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RAVTHTPRYLRGFTPGQQGLHCPACASTQLVYSETMPVGNPEVHCQVCQTDFVMYPDIPK CHHCCCCHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCEEECCCCCC GIDPFAVNTPQYDIPLPRWFSRLFSHASQAQYQHLREVWQREPVLREAVDRLDAQNPEQG CCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC AVYACPYCQNKHISPRKTASSIEGYYCPACDNPFTATTGTVFTRMRQEHFWRLYAVLVML CEEECCCCCCCCCCCHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH WTQWRPTQIFELCQLRSVHPFLTYHKRLAPLLAEFDGAPITPYPRNLLGFTPGQQGVCCV HCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCEEEE YCQSTKLITEGITVMPLDNPYICCLDCGQRFMLRVWRKQVKSNEKK EECCCEEHHCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA