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The map label for this gene is 218906644

Identifier: 218906644

GI number: 218906644

Start: 5267263

End: 5268087

Strand: Reverse

Name: 218906644

Synonym: BCAH820_5558

Alternate gene names: NA

Gene position: 5268087-5267263 (Counterclockwise)

Preceding gene: 218906645

Following gene: 218906643

Centisome position: 99.35

GC content: 34.91

Gene sequence:

>825_bases
ATGCTAGGGGTAGAAGTGACAATCGATAAGTTTGTTACGGAGTATAAAGATATTTCACATTCAGTATTTTTACATTTGTA
TATGATTGTAGCGCAGAAATATAAAGTAAGAAAAAAGACATACACAAGTTCATACGGACATGAAATATACATAAGGAAAT
GTAATGGCGCATATATGTACTTGTATTATAAAAACCTTAGAGAAACAGATGGATATTTACACACCTTAAGGATAGAAACA
AAACCAGATTATTATGCACAATTTCAAGAAATATTAGGCATGCTAGTAGAGAAAGCAAGTCGAATAGAATTTGTAAGTTG
TGACGTAGCGTATGATATACCAATAGGAATGGAAGAGGTAGTTGTAATACCAACAGATGCGCGTAGGAAGATGAGTCACT
ATGAGACAACCCGCTATTTTGGTAAACCCGAACAAAGAAAGCAAAATGCATACTGTCGAATTTATGATAAGAGATTGGAA
TTGGAGCAGAATCAAGGTATTTATATAACACATGATTTAAGTAGGATAGAGATTGTGTATAAAGTCAGTGAGAAAGTATT
GTTGAACGATATAGTAAAATACCCACCGAAACAGAATGAAAGTTATTTTGCGGCAGTGGTAACGGACTGGGAAGCTTTAA
AAAGAAAGCAAGTGGAGAGGATAATAAATTTGCGAGATGGAAAAGAGGCATATACACAATATGTGAGAAGAGGAATAAAA
AAGAACCTTGCCAACCAGTATCGAGTGGATTTCGACGAGTTAGCAAGGAGGTCTTGGGAAAAGTTAATAAAAGGGCCTTG
TTCAACTATACTTGGAATAGCGTAA

Upstream 100 bases:

>100_bases
TATTTTGGGTTAATGTTTTTGAAAGCAATATAATTAATAAGTGCAATAAGTATTAAGTTTTTATAATAAAGAATTCAAAA
ATGATAAAAAGGATGATTAT

Downstream 100 bases:

>100_bases
TGAATTTCCCTTTATGTTAATTTAATTTTAATATATTGTAATTATATGATTTTATTAGAGGAAAAACGACTATAAAGTAG
GATATTGTGCAAATTTCCGA

Product: replication initiation factor family

Products: NA

Alternate protein names: Replication Initiation Factor

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MLGVEVTIDKFVTEYKDISHSVFLHLYMIVAQKYKVRKKTYTSSYGHEIYIRKCNGAYMYLYYKNLRETDGYLHTLRIET
KPDYYAQFQEILGMLVEKASRIEFVSCDVAYDIPIGMEEVVVIPTDARRKMSHYETTRYFGKPEQRKQNAYCRIYDKRLE
LEQNQGIYITHDLSRIEIVYKVSEKVLLNDIVKYPPKQNESYFAAVVTDWEALKRKQVERIINLRDGKEAYTQYVRRGIK
KNLANQYRVDFDELARRSWEKLIKGPCSTILGIA

Sequences:

>Translated_274_residues
MLGVEVTIDKFVTEYKDISHSVFLHLYMIVAQKYKVRKKTYTSSYGHEIYIRKCNGAYMYLYYKNLRETDGYLHTLRIET
KPDYYAQFQEILGMLVEKASRIEFVSCDVAYDIPIGMEEVVVIPTDARRKMSHYETTRYFGKPEQRKQNAYCRIYDKRLE
LEQNQGIYITHDLSRIEIVYKVSEKVLLNDIVKYPPKQNESYFAAVVTDWEALKRKQVERIINLRDGKEAYTQYVRRGIK
KNLANQYRVDFDELARRSWEKLIKGPCSTILGIA
>Mature_274_residues
MLGVEVTIDKFVTEYKDISHSVFLHLYMIVAQKYKVRKKTYTSSYGHEIYIRKCNGAYMYLYYKNLRETDGYLHTLRIET
KPDYYAQFQEILGMLVEKASRIEFVSCDVAYDIPIGMEEVVVIPTDARRKMSHYETTRYFGKPEQRKQNAYCRIYDKRLE
LEQNQGIYITHDLSRIEIVYKVSEKVLLNDIVKYPPKQNESYFAAVVTDWEALKRKQVERIINLRDGKEAYTQYVRRGIK
KNLANQYRVDFDELARRSWEKLIKGPCSTILGIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32507; Mature: 32507

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGVEVTIDKFVTEYKDISHSVFLHLYMIVAQKYKVRKKTYTSSYGHEIYIRKCNGAYMY
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEE
LYYKNLRETDGYLHTLRIETKPDYYAQFQEILGMLVEKASRIEFVSCDVAYDIPIGMEEV
EEEECCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEEECEEEECCCCCCCE
VVIPTDARRKMSHYETTRYFGKPEQRKQNAYCRIYDKRLELEQNQGIYITHDLSRIEIVY
EEECCCHHHHHHHHHHHHHCCCCHHHCCCCCEEEEHHHHCCCCCCCEEEEECCCCEEEEH
KVSEKVLLNDIVKYPPKQNESYFAAVVTDWEALKRKQVERIINLRDGKEAYTQYVRRGIK
HHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
KNLANQYRVDFDELARRSWEKLIKGPCSTILGIA
HHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHCCC
>Mature Secondary Structure
MLGVEVTIDKFVTEYKDISHSVFLHLYMIVAQKYKVRKKTYTSSYGHEIYIRKCNGAYMY
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEE
LYYKNLRETDGYLHTLRIETKPDYYAQFQEILGMLVEKASRIEFVSCDVAYDIPIGMEEV
EEEECCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEEECEEEECCCCCCCE
VVIPTDARRKMSHYETTRYFGKPEQRKQNAYCRIYDKRLELEQNQGIYITHDLSRIEIVY
EEECCCHHHHHHHHHHHHHCCCCHHHCCCCCEEEEHHHHCCCCCCCEEEEECCCCEEEEH
KVSEKVLLNDIVKYPPKQNESYFAAVVTDWEALKRKQVERIINLRDGKEAYTQYVRRGIK
HHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
KNLANQYRVDFDELARRSWEKLIKGPCSTILGIA
HHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA