Click here to switch to the map view.

The map label for this gene is ohrR [H]

Identifier: 218905669

GI number: 218905669

Start: 4313029

End: 4313481

Strand: Direct

Name: ohrR [H]

Synonym: BCAH820_4554

Alternate gene names: 218905669

Gene position: 4313029-4313481 (Clockwise)

Preceding gene: 218905628

Following gene: 218905670

Centisome position: 81.34

GC content: 32.67

Gene sequence:

>453_bases
ATGATAGAAGATTCTTTGCATCTAGATAATCAACTTTGTTTTTCTATTTATGCTTGTTCTAGAGAGGTTACACGCTTTTA
CCGACCGTATTTAGAAGAAATGGGCATTACGTATCCACAGTACATTACTTTACTCGTACTATGGGAGCAAGATGGTCTAA
CAGTAAAAGAAATTGGAGAACGTCTATTTTTAGATTCCGGTACGTTAACACCTATGTTAAAACGAATGGAATCATTAAAC
CTTGTAAAACGCGTTCGTTCCAAAGAAGATGAGCGAAAAGTGTGTATTGAATTAACAGAACAAGGAAAAGATTTACAAGA
TAAGGCTTGTTCATTGCCGACAACGATGGCAACAAATTTAGGAATTACAGAACAAGAATATCGTTCTTTATTAATTCAAT
TAAATAAACTAATTGAAACAATGAAAACAATTAATGATAGAAAAGGGGAATAA

Upstream 100 bases:

>100_bases
AAACTTTCTCAATACAATGTATTTGACATTGTATTTATTTTTCGTTATATTGATTTTACAAAATTAAATTGTGCACAACT
TAATTAGAAAGGAGCCATTC

Downstream 100 bases:

>100_bases
ACATGGATAAATTATATACTGCTTCAGTAACTGCTACAGGTGGAAGAAATGGAAAAGTAGTATCAGATGATGGCATATTA
AATCTTGATGTAAAAATGCC

Product: transcriptional regulator, MarR family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MIEDSLHLDNQLCFSIYACSREVTRFYRPYLEEMGITYPQYITLLVLWEQDGLTVKEIGERLFLDSGTLTPMLKRMESLN
LVKRVRSKEDERKVCIELTEQGKDLQDKACSLPTTMATNLGITEQEYRSLLIQLNKLIETMKTINDRKGE

Sequences:

>Translated_150_residues
MIEDSLHLDNQLCFSIYACSREVTRFYRPYLEEMGITYPQYITLLVLWEQDGLTVKEIGERLFLDSGTLTPMLKRMESLN
LVKRVRSKEDERKVCIELTEQGKDLQDKACSLPTTMATNLGITEQEYRSLLIQLNKLIETMKTINDRKGE
>Mature_150_residues
MIEDSLHLDNQLCFSIYACSREVTRFYRPYLEEMGITYPQYITLLVLWEQDGLTVKEIGERLFLDSGTLTPMLKRMESLN
LVKRVRSKEDERKVCIELTEQGKDLQDKACSLPTTMATNLGITEQEYRSLLIQLNKLIETMKTINDRKGE

Specific function: Organic peroxide sensor. Represses the expression of the peroxide-inducible gene ohrA by cooperative binding to two inverted repeat elements [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 17488; Mature: 17488

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEDSLHLDNQLCFSIYACSREVTRFYRPYLEEMGITYPQYITLLVLWEQDGLTVKEIGE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEECCCCCCHHHHHH
RLFLDSGTLTPMLKRMESLNLVKRVRSKEDERKVCIELTEQGKDLQDKACSLPTTMATNL
HHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHCCCHHHHHCC
GITEQEYRSLLIQLNKLIETMKTINDRKGE
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIEDSLHLDNQLCFSIYACSREVTRFYRPYLEEMGITYPQYITLLVLWEQDGLTVKEIGE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEECCCCCCHHHHHH
RLFLDSGTLTPMLKRMESLNLVKRVRSKEDERKVCIELTEQGKDLQDKACSLPTTMATNL
HHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHCCCHHHHHCC
GITEQEYRSLLIQLNKLIETMKTINDRKGE
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 11418552; 11983871 [H]