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The map label for this gene is yokA [H]

Identifier: 218905532

GI number: 218905532

Start: 4178574

End: 4180127

Strand: Direct

Name: yokA [H]

Synonym: BCAH820_4417

Alternate gene names: 218905532

Gene position: 4178574-4180127 (Clockwise)

Preceding gene: 218905531

Following gene: 218905534

Centisome position: 78.8

GC content: 35.01

Gene sequence:

>1554_bases
ATGAAAACAGCAATCTATTTACGTAAATCGCGCGCTGATATGGAAGCTGAGCAACGTGGCGAAGGCGAAACTTTAGCAAA
ACATAGAACAGCGCTCTTAAAAGTTGCTAAAGAAAAAAGCTTAAATATTATCGCTGTACACGAAGAAATTGTTTCAGGTG
AAAGTCTTGTACATCGACCTGAAATGTTAAAACTTCTCCAAGACGTAGAAGACAAGAAATACGATGCTGTTCTGTGCATG
GATATGGACCGTCTAGGACGCGGAGGAATGAAAGAGCAAGGAATTATACTTGAAACGTTTAAACGTTCTAATACAAAGAT
TGTGACGCCTAGAAAGATATACGACTTAAATGATGAGTGGGACGAGGAATACTCTGAATTTGAAGCATTTATGGCCCGAA
AAGAATTAAAAATTATTACACGGCGTATGCAACGTGGACGCATTGCATCAGTAGAGTCTGGTAATTATCTTGGCACAACA
CCTCCATACGGATATCTTATTAAAGAATTAAAAGACGGTCGTACTTTAGAACCACATCCAGATCAATCAAAAATCGTAAA
ATTAATATTTGAATGGTATACACATGATGACCCAGAAATAAGAATTGGTGCTTCTATGATCGCTAACAAAATTAATGCAT
TGGGACACAAAACAGCAACAGGAAAAACGTGGGGGAACTGGACTGTATTAGGGATTATTAAAAATCCTGTTTATTCCGGA
AAAGTAACCTGGAAAAAGAAAGAAATAAAAAAATCTATTACTCCTGGAAAAGTTAAAGACACAAGAACCAGAGATGAAAG
TGAATGGATTATTGTTGATGGAAAACACGATGCAATTATTTCGGAAGAATTATTTGAAAAAGCTCAATCCATTTTGAAAG
GGCGGTATCATGTACCATATCAATTAACCAACGGTGTTAGAAGTGCATTAGCTGGTATTATAAAGTGTGCTAAGTGTGGC
GCTTCTATGGTGTATCGTCCATATACAACTCAAAAACCTGCTTTAAAGTGCTACAACCAAACACGATGTCATAATAAATC
TAGTAACTATGAATTAGTCGAGAGAAGGATTTTAGAAGGAATTGCTGAATGGTTAGAAGTATACAAAGCAAATTTTGAAA
TGAATTCACCTCAAGAAGAAACGAGTGAGATGAACCAAATAAATGTCTATCGACAAATGTTAAAAAATCTTGAAAAAGAA
TTAGCTGAAACAGAAAAACAAAAAGAGAATTTATTTGATTTCCTTGAGCGTAAAATATACACTGAGGATGTATTTTTAAG
CCGCTCCAAAACACTTGCTGTTAAGACTGAGAAGCTACAACAAGATATTGATACTATAAAAGAAAGTATTGATAATGAAT
TACAACGGGAACAAGCACAAGATAATATTATCCCACAAGTCGAACGGGTATTAGATCTCTATGACAAAACAGATGACCCT
AAAAAGAAAAACAGCCTTCTCAAGTCTGTGCTTGAAAAAGCTGTTTATAATAAAGAGAAACATCAATACAAGGATGATTT
TTCTCTAACTCTATATCCTAAGTTACCAAAGTAA

Upstream 100 bases:

>100_bases
TAAGGTCCCTTTTTGGGGCTTTTCTTTTGTCATTTATTACATTTACTTCTTTATCCTATTCCCTTTTTGTATAATGGATA
TTAATTAAGGAGGAATTGCT

Downstream 100 bases:

>100_bases
GCCTGTAGACCCCTATTCTACGGGCTTTTTCTAAACAGGATAAAGTCTAGTCGGCATCTCATTCCCCTCTTTATCTTGCC
CGATTGGATCATGAAGTGAA

Product: recombinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 517; Mature: 517

Protein sequence:

>517_residues
MKTAIYLRKSRADMEAEQRGEGETLAKHRTALLKVAKEKSLNIIAVHEEIVSGESLVHRPEMLKLLQDVEDKKYDAVLCM
DMDRLGRGGMKEQGIILETFKRSNTKIVTPRKIYDLNDEWDEEYSEFEAFMARKELKIITRRMQRGRIASVESGNYLGTT
PPYGYLIKELKDGRTLEPHPDQSKIVKLIFEWYTHDDPEIRIGASMIANKINALGHKTATGKTWGNWTVLGIIKNPVYSG
KVTWKKKEIKKSITPGKVKDTRTRDESEWIIVDGKHDAIISEELFEKAQSILKGRYHVPYQLTNGVRSALAGIIKCAKCG
ASMVYRPYTTQKPALKCYNQTRCHNKSSNYELVERRILEGIAEWLEVYKANFEMNSPQEETSEMNQINVYRQMLKNLEKE
LAETEKQKENLFDFLERKIYTEDVFLSRSKTLAVKTEKLQQDIDTIKESIDNELQREQAQDNIIPQVERVLDLYDKTDDP
KKKNSLLKSVLEKAVYNKEKHQYKDDFSLTLYPKLPK

Sequences:

>Translated_517_residues
MKTAIYLRKSRADMEAEQRGEGETLAKHRTALLKVAKEKSLNIIAVHEEIVSGESLVHRPEMLKLLQDVEDKKYDAVLCM
DMDRLGRGGMKEQGIILETFKRSNTKIVTPRKIYDLNDEWDEEYSEFEAFMARKELKIITRRMQRGRIASVESGNYLGTT
PPYGYLIKELKDGRTLEPHPDQSKIVKLIFEWYTHDDPEIRIGASMIANKINALGHKTATGKTWGNWTVLGIIKNPVYSG
KVTWKKKEIKKSITPGKVKDTRTRDESEWIIVDGKHDAIISEELFEKAQSILKGRYHVPYQLTNGVRSALAGIIKCAKCG
ASMVYRPYTTQKPALKCYNQTRCHNKSSNYELVERRILEGIAEWLEVYKANFEMNSPQEETSEMNQINVYRQMLKNLEKE
LAETEKQKENLFDFLERKIYTEDVFLSRSKTLAVKTEKLQQDIDTIKESIDNELQREQAQDNIIPQVERVLDLYDKTDDP
KKKNSLLKSVLEKAVYNKEKHQYKDDFSLTLYPKLPK
>Mature_517_residues
MKTAIYLRKSRADMEAEQRGEGETLAKHRTALLKVAKEKSLNIIAVHEEIVSGESLVHRPEMLKLLQDVEDKKYDAVLCM
DMDRLGRGGMKEQGIILETFKRSNTKIVTPRKIYDLNDEWDEEYSEFEAFMARKELKIITRRMQRGRIASVESGNYLGTT
PPYGYLIKELKDGRTLEPHPDQSKIVKLIFEWYTHDDPEIRIGASMIANKINALGHKTATGKTWGNWTVLGIIKNPVYSG
KVTWKKKEIKKSITPGKVKDTRTRDESEWIIVDGKHDAIISEELFEKAQSILKGRYHVPYQLTNGVRSALAGIIKCAKCG
ASMVYRPYTTQKPALKCYNQTRCHNKSSNYELVERRILEGIAEWLEVYKANFEMNSPQEETSEMNQINVYRQMLKNLEKE
LAETEKQKENLFDFLERKIYTEDVFLSRSKTLAVKTEKLQQDIDTIKESIDNELQREQAQDNIIPQVERVLDLYDKTDDP
KKKNSLLKSVLEKAVYNKEKHQYKDDFSLTLYPKLPK

Specific function: Unknown

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 recombinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011109
- InterPro:   IPR006119 [H]

Pfam domain/function: PF07508 Recombinase; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 59957; Mature: 59957

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTAIYLRKSRADMEAEQRGEGETLAKHRTALLKVAKEKSLNIIAVHEEIVSGESLVHRP
CCCEEEEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHCCHHHHCCH
EMLKLLQDVEDKKYDAVLCMDMDRLGRGGMKEQGIILETFKRSNTKIVTPRKIYDLNDEW
HHHHHHHHHCCCCCCEEEEECHHHHCCCCCCCCCEEHEECCCCCCEEECCHHEECCCCHH
DEEYSEFEAFMARKELKIITRRMQRGRIASVESGNYLGTTPPYGYLIKELKDGRTLEPHP
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCC
DQSKIVKLIFEWYTHDDPEIRIGASMIANKINALGHKTATGKTWGNWTVLGIIKNPVYSG
CHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCC
KVTWKKKEIKKSITPGKVKDTRTRDESEWIIVDGKHDAIISEELFEKAQSILKGRYHVPY
EEEEEHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCH
QLTNGVRSALAGIIKCAKCGASMVYRPYTTQKPALKCYNQTRCHNKSSNYELVERRILEG
HHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH
IAEWLEVYKANFEMNSPQEETSEMNQINVYRQMLKNLEKELAETEKQKENLFDFLERKIY
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TEDVFLSRSKTLAVKTEKLQQDIDTIKESIDNELQREQAQDNIIPQVERVLDLYDKTDDP
HHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC
KKKNSLLKSVLEKAVYNKEKHQYKDDFSLTLYPKLPK
HHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEECCCCC
>Mature Secondary Structure
MKTAIYLRKSRADMEAEQRGEGETLAKHRTALLKVAKEKSLNIIAVHEEIVSGESLVHRP
CCCEEEEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHCCHHHHCCH
EMLKLLQDVEDKKYDAVLCMDMDRLGRGGMKEQGIILETFKRSNTKIVTPRKIYDLNDEW
HHHHHHHHHCCCCCCEEEEECHHHHCCCCCCCCCEEHEECCCCCCEEECCHHEECCCCHH
DEEYSEFEAFMARKELKIITRRMQRGRIASVESGNYLGTTPPYGYLIKELKDGRTLEPHP
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCC
DQSKIVKLIFEWYTHDDPEIRIGASMIANKINALGHKTATGKTWGNWTVLGIIKNPVYSG
CHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCC
KVTWKKKEIKKSITPGKVKDTRTRDESEWIIVDGKHDAIISEELFEKAQSILKGRYHVPY
EEEEEHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCH
QLTNGVRSALAGIIKCAKCGASMVYRPYTTQKPALKCYNQTRCHNKSSNYELVERRILEG
HHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH
IAEWLEVYKANFEMNSPQEETSEMNQINVYRQMLKNLEKELAETEKQKENLFDFLERKIY
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TEDVFLSRSKTLAVKTEKLQQDIDTIKESIDNELQREQAQDNIIPQVERVLDLYDKTDDP
HHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC
KKKNSLLKSVLEKAVYNKEKHQYKDDFSLTLYPKLPK
HHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]