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The map label for this gene is immA [H]

Identifier: 218905530

GI number: 218905530

Start: 4177290

End: 4177724

Strand: Direct

Name: immA [H]

Synonym: BCAH820_4415

Alternate gene names: 218905530

Gene position: 4177290-4177724 (Clockwise)

Preceding gene: 218905529

Following gene: 218905531

Centisome position: 78.78

GC content: 34.94

Gene sequence:

>435_bases
ATGGACATCAAAGAATTCGTACTAAACATTACAGAAAAACACGGCACAACAAATCCATTTAAAATTGCTAAAAACAAAGA
CATTATTGTGTTGTATGAAGACCTAGGGAATACTCTCGGCTTTTACAACACTTATAAACGTTTTAAATTTATTCATATTA
ATAATCAAATTGACGAAATCACTCAACGCTTTGTTTGTGCGCATGAATTAGGTCATGCTGTACTTCATCCTAAAGCAAAC
ACTCCTTTCTTACGTAACCAAACATTCTTTTCGGTAGATCGCTTAGAAATTGAAGCAAATACATTTGCTGTGGAGCTTCT
ACTTACCGACGAAATGATTTCTGCTTATGAAGATACTCGTCTATCTATACAAGAAGTTGCGGAGATTCATGGGATCCCTG
GAGGGTTCGCACGTTTAAAAAATTATACCTGTTAA

Upstream 100 bases:

>100_bases
ATTCGTATTTCTCTTGAAAACTCAATGCGTATGGCAAAACAATTAGCAAAACAAAAATTCACTCCTAACAAATATAAAAA
AGACTGAGTGGAGTGAATTT

Downstream 100 bases:

>100_bases
ATAGAGAAAACATACCAATATACGGAGGATATGTAATGAAGAAATATCTAATGCCATTCACAGTTCTCTTCTTAACTGTC
GGACTAATTGGTTGCAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MDIKEFVLNITEKHGTTNPFKIAKNKDIIVLYEDLGNTLGFYNTYKRFKFIHINNQIDEITQRFVCAHELGHAVLHPKAN
TPFLRNQTFFSVDRLEIEANTFAVELLLTDEMISAYEDTRLSIQEVAEIHGIPGGFARLKNYTC

Sequences:

>Translated_144_residues
MDIKEFVLNITEKHGTTNPFKIAKNKDIIVLYEDLGNTLGFYNTYKRFKFIHINNQIDEITQRFVCAHELGHAVLHPKAN
TPFLRNQTFFSVDRLEIEANTFAVELLLTDEMISAYEDTRLSIQEVAEIHGIPGGFARLKNYTC
>Mature_144_residues
MDIKEFVLNITEKHGTTNPFKIAKNKDIIVLYEDLGNTLGFYNTYKRFKFIHINNQIDEITQRFVCAHELGHAVLHPKAN
TPFLRNQTFFSVDRLEIEANTFAVELLLTDEMISAYEDTRLSIQEVAEIHGIPGGFARLKNYTC

Specific function: Involved in the regulation of horizontal gene transfer through the integrative and conjugative element ICEBs1. Required for degradation of the ICEBs1 repressor protein immR/ydcN [H]

COG id: COG2856

COG function: function code E; Predicted Zn peptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010359 [H]

Pfam domain/function: PF06114 DUF955 [H]

EC number: NA

Molecular weight: Translated: 16609; Mature: 16609

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKEFVLNITEKHGTTNPFKIAKNKDIIVLYEDLGNTLGFYNTYKRFKFIHINNQIDEI
CCHHHHHHHHHHCCCCCCCEEEECCCCEEEEEHHCCCCCCCCHHHHEEEEEEECCHHHHH
TQRFVCAHELGHAVLHPKANTPFLRNQTFFSVDRLEIEANTFAVELLLTDEMISAYEDTR
HHHHHHHHHHCCEEECCCCCCCEECCCCEEEEEEEEEECCEEEEEEEEEHHHHHHHHCCC
LSIQEVAEIHGIPGGFARLKNYTC
CCHHHHHHHCCCCCHHHHHCCCCC
>Mature Secondary Structure
MDIKEFVLNITEKHGTTNPFKIAKNKDIIVLYEDLGNTLGFYNTYKRFKFIHINNQIDEI
CCHHHHHHHHHHCCCCCCCEEEECCCCEEEEEHHCCCCCCCCHHHHEEEEEEECCHHHHH
TQRFVCAHELGHAVLHPKANTPFLRNQTFFSVDRLEIEANTFAVELLLTDEMISAYEDTR
HHHHHHHHHHCCEEECCCCCCCEECCCCEEEEEEEEEECCEEEEEEEEEHHHHHHHHCCC
LSIQEVAEIHGIPGGFARLKNYTC
CCHHHHHHHCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]