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The map label for this gene is yhcW [H]

Identifier: 218905339

GI number: 218905339

Start: 4027486

End: 4028148

Strand: Reverse

Name: yhcW [H]

Synonym: BCAH820_4222

Alternate gene names: 218905339

Gene position: 4028148-4027486 (Counterclockwise)

Preceding gene: 218905340

Following gene: 218905336

Centisome position: 75.96

GC content: 34.54

Gene sequence:

>663_bases
ATGAAAGCAATTATTTTTGATTTTGATGGATTAATTGTGGATACAGAAACAATATGGTTTCACTCTTTCAGAGACGCCGT
TCGTGAGTACGGTGGAGATTTACCTTTAGAGGAATTTGCAAAATGTATTGGAACGACAGACGATGTACTGTATGAATATT
TAAATGAGCAGTTAAAAGAGAAGTTTGATAAGTATGCATTAAAAGAAAAAGTGAAAAATTTACATAAAGAGAAAATGAAA
ATACCAGAAGCTCGTGACGGGGTAAAAGAATACTTAGAAGAAGCGAAAGAAATGGGATTAAAAATCGCATTAGCTTCCAG
TTCCTCTAGAGAATGGGTTATTCCTTTTTTGGAAGAACTACAAATTCGAGATTATTTTGAAGTCATTAAAACGAGAGAAG
ATGTTGAGAAGGTAAAACCAGATCCAGCACTTTACCGAGTAGCAATAGAAGATTTAGGAATAGATTCGTCTGAAGCCGTG
GTATTTGAAGACTCGTTAAATGGATTGAAAGCAGCGATTGCAGCGGGATTAACGTGCGTTGTTGTACCGAATGATGTGAC
ACGTAATTTACCATTTGAAAATCATCACCTTCGAATTGAAAGTATGAAAGATAAAAGTTTGAAAGAAGTAATGCAAAATA
TAAAGAAAGACCGTATCTCCTAA

Upstream 100 bases:

>100_bases
AAACACTTCGTGGCGTTCAAAAAGCAAATGAAGAGAAAAGTAATTAAGGGGAACGTACGTCGTTTCCTTTTTTATTTCAA
TCGAAAAGGATGGGAGAATG

Downstream 100 bases:

>100_bases
AAGGAAGCACGGTCTTTCTTTTTGTTTTTTTTACCTTCAATGACAGTTAAATGAGATTGTTTTCTTTTTCGCTTCAAAGA
AGAAGGATTCCCTTTTTTTC

Product: hydrolase, haloacid dehalogenase-like family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MKAIIFDFDGLIVDTETIWFHSFRDAVREYGGDLPLEEFAKCIGTTDDVLYEYLNEQLKEKFDKYALKEKVKNLHKEKMK
IPEARDGVKEYLEEAKEMGLKIALASSSSREWVIPFLEELQIRDYFEVIKTREDVEKVKPDPALYRVAIEDLGIDSSEAV
VFEDSLNGLKAAIAAGLTCVVVPNDVTRNLPFENHHLRIESMKDKSLKEVMQNIKKDRIS

Sequences:

>Translated_220_residues
MKAIIFDFDGLIVDTETIWFHSFRDAVREYGGDLPLEEFAKCIGTTDDVLYEYLNEQLKEKFDKYALKEKVKNLHKEKMK
IPEARDGVKEYLEEAKEMGLKIALASSSSREWVIPFLEELQIRDYFEVIKTREDVEKVKPDPALYRVAIEDLGIDSSEAV
VFEDSLNGLKAAIAAGLTCVVVPNDVTRNLPFENHHLRIESMKDKSLKEVMQNIKKDRIS
>Mature_220_residues
MKAIIFDFDGLIVDTETIWFHSFRDAVREYGGDLPLEEFAKCIGTTDDVLYEYLNEQLKEKFDKYALKEKVKNLHKEKMK
IPEARDGVKEYLEEAKEMGLKIALASSSSREWVIPFLEELQIRDYFEVIKTREDVEKVKPDPALYRVAIEDLGIDSSEAV
VFEDSLNGLKAAIAAGLTCVVVPNDVTRNLPFENHHLRIESMKDKSLKEVMQNIKKDRIS

Specific function: Unknown

COG id: COG0637

COG function: function code R; Predicted phosphatase/phosphohexomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Escherichia coli, GI1788021, Length=215, Percent_Identity=27.4418604651163, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1789046, Length=182, Percent_Identity=25.2747252747253, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1787576, Length=196, Percent_Identity=25, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17554716, Length=191, Percent_Identity=26.7015706806283, Blast_Score=64, Evalue=6e-11,
Organism=Drosophila melanogaster, GI116008157, Length=191, Percent_Identity=30.8900523560209, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI17137324, Length=191, Percent_Identity=27.2251308900524, Blast_Score=68, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR006402
- InterPro:   IPR005833 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 25334; Mature: 25334

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAIIFDFDGLIVDTETIWFHSFRDAVREYGGDLPLEEFAKCIGTTDDVLYEYLNEQLKE
CCEEEEECCCEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHH
KFDKYALKEKVKNLHKEKMKIPEARDGVKEYLEEAKEMGLKIALASSSSREWVIPFLEEL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCEEHHHHHHH
QIRDYFEVIKTREDVEKVKPDPALYRVAIEDLGIDSSEAVVFEDSLNGLKAAIAAGLTCV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCEEE
VVPNDVTRNLPFENHHLRIESMKDKSLKEVMQNIKKDRIS
EECCHHHHCCCCCCCEEEEHHHCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKAIIFDFDGLIVDTETIWFHSFRDAVREYGGDLPLEEFAKCIGTTDDVLYEYLNEQLKE
CCEEEEECCCEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHH
KFDKYALKEKVKNLHKEKMKIPEARDGVKEYLEEAKEMGLKIALASSSSREWVIPFLEEL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCEEHHHHHHH
QIRDYFEVIKTREDVEKVKPDPALYRVAIEDLGIDSSEAVVFEDSLNGLKAAIAAGLTCV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCEEE
VVPNDVTRNLPFENHHLRIESMKDKSLKEVMQNIKKDRIS
EECCHHHHCCCCCCCEEEEHHHCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]