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The map label for this gene is yqjB [H]

Identifier: 218905286

GI number: 218905286

Start: 3980362

End: 3980922

Strand: Reverse

Name: yqjB [H]

Synonym: BCAH820_4170

Alternate gene names: 218905286

Gene position: 3980922-3980362 (Counterclockwise)

Preceding gene: 218905287

Following gene: 218905285

Centisome position: 75.07

GC content: 37.43

Gene sequence:

>561_bases
ATGCCGTATCTTCTCTCTTTCATATTATGTCTTTCTTTATCGCCTATTTGGCCTCTTGGTGAGAATCCGCGTGCCGGTGA
TCCTTTCATTATTGTAAATAAAGCGACGAATAAACTAGCTTATATTGACGATGGAAAGATTCAAAAGGTTTTTCCAGTCG
CGACAGGGAAAACAAATGAATTAACCCCAGAGGGAACTTTTGATATTGTAATGAAAGCAAAGGACCCATATTATATTGCG
AAGAATATTCCTGGGGGATCACCGAAAAATCCACTTGGATCTAGGTGGATGGGGTTTAATGCAAGAGGAACGGATGGAAG
TAAATATGGAATACATGGAACGAACCAACCGAGTTCAATTGGAAAGTATATTTCACAAGGATGTATAAGAATGAAGAAAA
ACGATGTGGAGTATTTATTTGATCGCATTCCAATTGGAACGAAAGTATGGATTGTAAAATCGAAAAAATCATTTCAGCAA
TTGGCAAAAGAAAAAGGAGCCGTTGCATATGAAAAAGCCAACGAAAAGGTTGGCTTTTTCATATGGAATAAGTTGTCTTG
A

Upstream 100 bases:

>100_bases
GTTCAACTTGTGTATGAAATGGAGCAATATTTACTCATTAAAAGTCGTTTTAAGGGAAAGGATAATATAAAAGAACTTAT
ATAGAAGGTAGGAATTGTTT

Downstream 100 bases:

>100_bases
CATGTGTACATAACCATGCGTTAATGAGAGTATAGAAAGATAAAATTAGATAAAGGGGTTGCTCATATGTACTTGAATCC
AAAGCTTTCGTATATGCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MPYLLSFILCLSLSPIWPLGENPRAGDPFIIVNKATNKLAYIDDGKIQKVFPVATGKTNELTPEGTFDIVMKAKDPYYIA
KNIPGGSPKNPLGSRWMGFNARGTDGSKYGIHGTNQPSSIGKYISQGCIRMKKNDVEYLFDRIPIGTKVWIVKSKKSFQQ
LAKEKGAVAYEKANEKVGFFIWNKLS

Sequences:

>Translated_186_residues
MPYLLSFILCLSLSPIWPLGENPRAGDPFIIVNKATNKLAYIDDGKIQKVFPVATGKTNELTPEGTFDIVMKAKDPYYIA
KNIPGGSPKNPLGSRWMGFNARGTDGSKYGIHGTNQPSSIGKYISQGCIRMKKNDVEYLFDRIPIGTKVWIVKSKKSFQQ
LAKEKGAVAYEKANEKVGFFIWNKLS
>Mature_185_residues
PYLLSFILCLSLSPIWPLGENPRAGDPFIIVNKATNKLAYIDDGKIQKVFPVATGKTNELTPEGTFDIVMKAKDPYYIAK
NIPGGSPKNPLGSRWMGFNARGTDGSKYGIHGTNQPSSIGKYISQGCIRMKKNDVEYLFDRIPIGTKVWIVKSKKSFQQL
AKEKGAVAYEKANEKVGFFIWNKLS

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1788299, Length=141, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1787968, Length=151, Percent_Identity=33.112582781457, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 20681; Mature: 20550

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYLLSFILCLSLSPIWPLGENPRAGDPFIIVNKATNKLAYIDDGKIQKVFPVATGKTNE
CHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCEEEEEECCCCCCC
LTPEGTFDIVMKAKDPYYIAKNIPGGSPKNPLGSRWMGFNARGTDGSKYGIHGTNQPSSI
CCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHH
GKYISQGCIRMKKNDVEYLFDRIPIGTKVWIVKSKKSFQQLAKEKGAVAYEKANEKVGFF
HHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEEECHHHHHHHHHHCCCEEEECCCCEEEEE
IWNKLS
EEEECC
>Mature Secondary Structure 
PYLLSFILCLSLSPIWPLGENPRAGDPFIIVNKATNKLAYIDDGKIQKVFPVATGKTNE
HHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCEEEEEECCCCCCC
LTPEGTFDIVMKAKDPYYIAKNIPGGSPKNPLGSRWMGFNARGTDGSKYGIHGTNQPSSI
CCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHH
GKYISQGCIRMKKNDVEYLFDRIPIGTKVWIVKSKKSFQQLAKEKGAVAYEKANEKVGFF
HHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEEECHHHHHHHHHHCCCEEEECCCCEEEEE
IWNKLS
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]