Click here to switch to the map view.

The map label for this gene is rsgA

Identifier: 218904991

GI number: 218904991

Start: 3711146

End: 3712027

Strand: Reverse

Name: rsgA

Synonym: BCAH820_3875

Alternate gene names: 218904991

Gene position: 3712027-3711146 (Counterclockwise)

Preceding gene: 218904992

Following gene: 218904990

Centisome position: 70.0

GC content: 36.96

Gene sequence:

>882_bases
ATGCCAGAAGGAAAAATTGTAAAAGCTCTAAGTGGATTTTATTATGTGCAGCATGAAGAAGGGATTACACAATGTCGCGG
ACGTGGTGTGTTTAGAAAAAATAAAATTACACCACTGGTAGGAGACCAAGTTGTCTTTCAGGCTGATAATCCAAGTGAAG
GATACGTGCTTGAAGTATTTGATCGAAAAAATGAACTTGTTAGGCCTCCTATTGCTAATGTTGATCAGGCAATTCTCGTT
TTTTCTGCAGTAGAACCAGATTTTAATCCGGGACTGTTAGATCGATTTTTGGTGCTAATTGAATATCATAACATTAAGCC
GATTATTTGCATTAGTAAGATGGATTTAGTGGATGAAAAAATGAGAGAGACTGTTGAAGCTTATGCAAATGACTATCGTG
AGATGGGATATGATGTATTATTTACTTCTATAAATACATCGGAAAGTATTGATATTTTAAAACCATTCTTAGAAGGTTGT
GTTTCCGTCGTTGCGGGACAATCTGGTGTTGGGAAATCTTCTATGCTTAACGTCTTACGTCCAGAATTAGAACTGAAAAC
GAATGATATTTCCTCACATTTAGGACGCGGAAAACATACGACAAGACACGTAGAATTAATTGCGATTGGAAGCGGACTAG
TTGCAGATACACCTGGTTTTAGTTCACTCGATTTCATAGATATAGAGGTAGAAGATCTTACATATTGCTTTCCAGAGTTG
AAAGAAGCGAGCCAATACTGTAAATTTAGAGGGTGTACACATCTTTCTGAACCGAAATGTGCTGTGAAGGCTGCGGTTGA
AGAGGGGAAAATTACAGAATATCGTTATAAGAATTATAAACAATTCGTAGAAGAAATTAGAGAGAGAAAGCCGAGGTATT
AG

Upstream 100 bases:

>100_bases
TTAACTTATATATGACGGGTTTTGAAATCTTTATTTAAAGAATAATAATCCATTCAATATGAATTACAGCTTCACTTTAT
ACAGAATAAAGGAGAATTAT

Downstream 100 bases:

>100_bases
TTATGATTAAAATTGCACCATCGATCTTATCAGCAGATTTTTCAAAATTAGGGGAAGAGATTAAAGATGTAGAAAAGGGC
GGAGCGGATTACATTCATGT

Product: ribosome-associated GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MPEGKIVKALSGFYYVQHEEGITQCRGRGVFRKNKITPLVGDQVVFQADNPSEGYVLEVFDRKNELVRPPIANVDQAILV
FSAVEPDFNPGLLDRFLVLIEYHNIKPIICISKMDLVDEKMRETVEAYANDYREMGYDVLFTSINTSESIDILKPFLEGC
VSVVAGQSGVGKSSMLNVLRPELELKTNDISSHLGRGKHTTRHVELIAIGSGLVADTPGFSSLDFIDIEVEDLTYCFPEL
KEASQYCKFRGCTHLSEPKCAVKAAVEEGKITEYRYKNYKQFVEEIRERKPRY

Sequences:

>Translated_293_residues
MPEGKIVKALSGFYYVQHEEGITQCRGRGVFRKNKITPLVGDQVVFQADNPSEGYVLEVFDRKNELVRPPIANVDQAILV
FSAVEPDFNPGLLDRFLVLIEYHNIKPIICISKMDLVDEKMRETVEAYANDYREMGYDVLFTSINTSESIDILKPFLEGC
VSVVAGQSGVGKSSMLNVLRPELELKTNDISSHLGRGKHTTRHVELIAIGSGLVADTPGFSSLDFIDIEVEDLTYCFPEL
KEASQYCKFRGCTHLSEPKCAVKAAVEEGKITEYRYKNYKQFVEEIRERKPRY
>Mature_292_residues
PEGKIVKALSGFYYVQHEEGITQCRGRGVFRKNKITPLVGDQVVFQADNPSEGYVLEVFDRKNELVRPPIANVDQAILVF
SAVEPDFNPGLLDRFLVLIEYHNIKPIICISKMDLVDEKMRETVEAYANDYREMGYDVLFTSINTSESIDILKPFLEGCV
SVVAGQSGVGKSSMLNVLRPELELKTNDISSHLGRGKHTTRHVELIAIGSGLVADTPGFSSLDFIDIEVEDLTYCFPELK
EASQYCKFRGCTHLSEPKCAVKAAVEEGKITEYRYKNYKQFVEEIRERKPRY

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain

Homologues:

Organism=Escherichia coli, GI87082381, Length=307, Percent_Identity=36.4820846905537, Blast_Score=175, Evalue=3e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSGA_BACAN (Q81WH7)

Other databases:

- EMBL:   AE016879
- EMBL:   AE017334
- EMBL:   AE017225
- RefSeq:   NP_846241.1
- RefSeq:   YP_020639.1
- RefSeq:   YP_029963.1
- ProteinModelPortal:   Q81WH7
- SMR:   Q81WH7
- EnsemblBacteria:   EBBACT00000009592
- EnsemblBacteria:   EBBACT00000018161
- EnsemblBacteria:   EBBACT00000020710
- GeneID:   1086726
- GeneID:   2816551
- GeneID:   2850345
- GenomeReviews:   AE016879_GR
- GenomeReviews:   AE017225_GR
- GenomeReviews:   AE017334_GR
- KEGG:   ban:BA_3999
- KEGG:   bar:GBAA_3999
- KEGG:   bat:BAS3712
- TIGR:   BA_3999
- TIGR:   GBAA_3999
- GeneTree:   EBGT00050000002872
- HOGENOM:   HBG652450
- OMA:   FRDCKHL
- ProtClustDB:   PRK00098
- BioCyc:   BANT260799:BAS3712-MONOMER
- BioCyc:   BANT261594:GBAA3999-MONOMER
- HAMAP:   MF_01820
- InterPro:   IPR010914
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004881
- Gene3D:   G3DSA:2.40.50.140
- TIGRFAMs:   TIGR00157

Pfam domain/function: PF03193 DUF258; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 33132; Mature: 33001

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEGKIVKALSGFYYVQHEEGITQCRGRGVFRKNKITPLVGDQVVFQADNPSEGYVLEVF
CCCCHHHHHHHCEEEEECCCCHHHHHCCCCCCCCCCCCEECCEEEEECCCCCCCCEEEEE
DRKNELVRPPIANVDQAILVFSAVEPDFNPGLLDRFLVLIEYHNIKPIICISKMDLVDEK
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECHHHHHHHH
MRETVEAYANDYREMGYDVLFTSINTSESIDILKPFLEGCVSVVAGQSGVGKSSMLNVLR
HHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC
PELELKTNDISSHLGRGKHTTRHVELIAIGSGLVADTPGFSSLDFIDIEVEDLTYCFPEL
CCCEEECCHHHHHHCCCCCCCEEEEEEEECCCCEECCCCCCCCEEEEEEHHHHHHHHHHH
KEASQYCKFRGCTHLSEPKCAVKAAVEEGKITEYRYKNYKQFVEEIRERKPRY
HHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PEGKIVKALSGFYYVQHEEGITQCRGRGVFRKNKITPLVGDQVVFQADNPSEGYVLEVF
CCCHHHHHHHCEEEEECCCCHHHHHCCCCCCCCCCCCEECCEEEEECCCCCCCCEEEEE
DRKNELVRPPIANVDQAILVFSAVEPDFNPGLLDRFLVLIEYHNIKPIICISKMDLVDEK
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECHHHHHHHH
MRETVEAYANDYREMGYDVLFTSINTSESIDILKPFLEGCVSVVAGQSGVGKSSMLNVLR
HHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC
PELELKTNDISSHLGRGKHTTRHVELIAIGSGLVADTPGFSSLDFIDIEVEDLTYCFPEL
CCCEEECCHHHHHHCCCCCCCEEEEEEEECCCCEECCCCCCCCEEEEEEHHHHHHHHHHH
KEASQYCKFRGCTHLSEPKCAVKAAVEEGKITEYRYKNYKQFVEEIRERKPRY
HHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721629