Click here to switch to the map view.

The map label for this gene is yhfE [H]

Identifier: 218902103

GI number: 218902103

Start: 951901

End: 952950

Strand: Direct

Name: yhfE [H]

Synonym: BCAH820_0985

Alternate gene names: 218902103

Gene position: 951901-952950 (Clockwise)

Preceding gene: 218902101

Following gene: 218902104

Centisome position: 17.95

GC content: 37.05

Gene sequence:

>1050_bases
ATGGCACATTATGCGAAAGAAACGATGGAATTGATTAAGGAGCTTGTCTCTATTCCAAGTCCATCTGGAAATACAGAGAA
AATTATTCGTTTTATTGAAAACTATGTAAGTGAGTGGAATGTAGAAACGAAGCGTAACAATAAAGGTGCTCTTATTTTAA
CGGTAAAAGGGAAAAATGATGCACAGCACCGTTTATTAACAGCACATGTTGATACGTTAGGTGCGATGGTAAAAGAAATT
AAGCCAGATGGTCGTCTGAGTCTTTCTATGATTGGCGGATTTCGCTGGAACTCTGTAGAAGGGGAATATTGCGAAATTGA
AACATCAAGTGGCAAGACGTATACAGGAACGATTTTAATGCATCAAACATCTGTACATGTATATAAAGATGCAGGTGAAG
CGAAACGCGATGAGAAAAATATTGAGGTTCGCATTGATGAGCGCGTATTTTCAGCTGATGAAGTACGTGAATTAGGAATT
GAAGTAGGAGACTTCGTTTCATTTGATCCACGCGTTCAAATTACAGAGAATGGATACATAAAATCACGTCATTTAGATGA
CAAAGTAAGTGTTGCGATTCTATTAAAATTAATTAAGAGATTACAAGATGAAAATGTAACATTACCATATACAACTCATT
TCTTAATCTCTAACAATGAAGAGATTGGGTACGGCGGAAACTCTAATATTCCAGAAGAAACGGTTGAATATTTAGCAGTA
GATATGGGAGCGTTAGGTGATGGACAAGCATCTGACGAGTATACAGTATCTATTTGTGCAAAAGACTCTAGCGGTCCGTA
TCATTATGCACTGCGTAAACATTTAGTAGAGCTTGCGAAAACGAACAATATTGAATATAAAGTAGATATTTATCCGTACT
ATGGATCGGATGCATCAGCTGCAATTCGCGCTGGATTTGATGTGAAACACGCATTAATTGGAGCAGGTATTGATTCTTCT
CATGCATTTGAGCGTACGCATGAAAGTTCGATTGCTCATACAGAAGCACTTGTTTATGCATATGTATTATCAGAGATGAT
TGCAGAATAA

Upstream 100 bases:

>100_bases
AATGAATTTTACTACAATTTAGAAAATTAAGCTATATGAGTAGAGGATTTATAGTAAATTCGGTATACTAAATAATAGGA
AAAATGAGGAGGAAATGACA

Downstream 100 bases:

>100_bases
GAAAAGAAATAGGCTACTTCTAGTAGCCTATTTTTTGTTTGCAGAGAAATCGATTTTATTTAACAAAAAGTAAATTTATT
GTGATTTATTTTACAATATT

Product: Peptidase, family M20/M25/M40 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MAHYAKETMELIKELVSIPSPSGNTEKIIRFIENYVSEWNVETKRNNKGALILTVKGKNDAQHRLLTAHVDTLGAMVKEI
KPDGRLSLSMIGGFRWNSVEGEYCEIETSSGKTYTGTILMHQTSVHVYKDAGEAKRDEKNIEVRIDERVFSADEVRELGI
EVGDFVSFDPRVQITENGYIKSRHLDDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNEEIGYGGNSNIPEETVEYLAV
DMGALGDGQASDEYTVSICAKDSSGPYHYALRKHLVELAKTNNIEYKVDIYPYYGSDASAAIRAGFDVKHALIGAGIDSS
HAFERTHESSIAHTEALVYAYVLSEMIAE

Sequences:

>Translated_349_residues
MAHYAKETMELIKELVSIPSPSGNTEKIIRFIENYVSEWNVETKRNNKGALILTVKGKNDAQHRLLTAHVDTLGAMVKEI
KPDGRLSLSMIGGFRWNSVEGEYCEIETSSGKTYTGTILMHQTSVHVYKDAGEAKRDEKNIEVRIDERVFSADEVRELGI
EVGDFVSFDPRVQITENGYIKSRHLDDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNEEIGYGGNSNIPEETVEYLAV
DMGALGDGQASDEYTVSICAKDSSGPYHYALRKHLVELAKTNNIEYKVDIYPYYGSDASAAIRAGFDVKHALIGAGIDSS
HAFERTHESSIAHTEALVYAYVLSEMIAE
>Mature_348_residues
AHYAKETMELIKELVSIPSPSGNTEKIIRFIENYVSEWNVETKRNNKGALILTVKGKNDAQHRLLTAHVDTLGAMVKEIK
PDGRLSLSMIGGFRWNSVEGEYCEIETSSGKTYTGTILMHQTSVHVYKDAGEAKRDEKNIEVRIDERVFSADEVRELGIE
VGDFVSFDPRVQITENGYIKSRHLDDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNEEIGYGGNSNIPEETVEYLAVD
MGALGDGQASDEYTVSICAKDSSGPYHYALRKHLVELAKTNNIEYKVDIYPYYGSDASAAIRAGFDVKHALIGAGIDSSH
AFERTHESSIAHTEALVYAYVLSEMIAE

Specific function: Unknown

COG id: COG1363

COG function: function code G; Cellulase M and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M42 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008007 [H]

Pfam domain/function: PF05343 Peptidase_M42 [H]

EC number: NA

Molecular weight: Translated: 38917; Mature: 38786

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHYAKETMELIKELVSIPSPSGNTEKIIRFIENYVSEWNVETKRNNKGALILTVKGKND
CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCEEEEEEECCCC
AQHRLLTAHVDTLGAMVKEIKPDGRLSLSMIGGFRWNSVEGEYCEIETSSGKTYTGTILM
CHHHEEHHHHHHHHHHHHHCCCCCCEEEEEECCEEECCCCCCEEEEECCCCCEEEEEEEE
HQTSVHVYKDAGEAKRDEKNIEVRIDERVFSADEVRELGIEVGDFVSFDPRVQITENGYI
EECEEEEEECCCCCCCCCCCEEEEECCHHCCHHHHHHHCCCCCCCCCCCCCEEEECCCEE
KSRHLDDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNEEIGYGGNSNIPEETVEYLAV
EECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCEECCCCCCCCHHHHHHHHHH
DMGALGDGQASDEYTVSICAKDSSGPYHYALRKHLVELAKTNNIEYKVDIYPYYGSDASA
HHCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCH
AIRAGFDVKHALIGAGIDSSHAFERTHESSIAHTEALVYAYVLSEMIAE
HHHCCCCHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AHYAKETMELIKELVSIPSPSGNTEKIIRFIENYVSEWNVETKRNNKGALILTVKGKND
CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCEEEEEEECCCC
AQHRLLTAHVDTLGAMVKEIKPDGRLSLSMIGGFRWNSVEGEYCEIETSSGKTYTGTILM
CHHHEEHHHHHHHHHHHHHCCCCCCEEEEEECCEEECCCCCCEEEEECCCCCEEEEEEEE
HQTSVHVYKDAGEAKRDEKNIEVRIDERVFSADEVRELGIEVGDFVSFDPRVQITENGYI
EECEEEEEECCCCCCCCCCCEEEEECCHHCCHHHHHHHCCCCCCCCCCCCCEEEECCCEE
KSRHLDDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNEEIGYGGNSNIPEETVEYLAV
EECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCEECCCCCCCCHHHHHHHHHH
DMGALGDGQASDEYTVSICAKDSSGPYHYALRKHLVELAKTNNIEYKVDIYPYYGSDASA
HHCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCH
AIRAGFDVKHALIGAGIDSSHAFERTHESSIAHTEALVYAYVLSEMIAE
HHHCCCCHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]