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The map label for this gene is racE1 [H]

Identifier: 218902060

GI number: 218902060

Start: 896842

End: 897672

Strand: Direct

Name: racE1 [H]

Synonym: BCAH820_0942

Alternate gene names: 218902060

Gene position: 896842-897672 (Clockwise)

Preceding gene: 218902054

Following gene: 218902061

Centisome position: 16.91

GC content: 39.23

Gene sequence:

>831_bases
ATGTCTGTATGTCATAAACATTCAGTAATAGGTGTGCTAGATTCGGGAGTTGGGGGATTAACAGTTGCGAGCGAAATTAT
AAGACAATTGCCTAAAGAGAGCATTTATTATATTGGTGATAATGAGCGTTGTCCGTATGGGCCAAGAAGTGTAGAAGAGG
TACAATCTTTCGTATTTGAAATGGTTGAGTTTCTCAAACAGTTTCCGTTAAAGGCTCTAGTTGTAGCATGTAATACTGCT
GCAGCTGCTACATTGGCTGCGTTGCAAGAAGCACTTTCTATTCCGGTTATTGGCGTTATACATCCGGGAGCAAGAGCGGC
TATTAAAGTGACAAAGAAAGGGAAAATCGGAGTAATTGGAACTGTAGGTACGATACAGTCTAATATGTACGAAAAAGCAT
TGCATGAGCTTGATACATATTTGAAAGTGCATAGTCATGCGTGCCCGACTTTAGCTACAGTTGTAGAAAATCGATTAGAA
GATACCGCATATGTCACGCAGCAAGTGAAACAAGCTTTACTTCCATTAACGAAAGAAGATATAGATACGTTAATTCTTGG
GTGTACGCATTATCCACTTTTAGAGTCCTATATTAAAAAGGAACTAGGAGAGGATGTAACGATTATTAGTTCTGCAGAAG
AAACAGCGATAGAGTTAAGCACAATTTTACAGCACAAAGGAATTCTGGCTGACAATCTGAATCCGAAGCATCGATTTTTT
ACAACAGGCTCTGTTTCTTCATTTGAACATATCGCTGAGCGTTGGCTAGGGTATCAAATTTCTGTAGATTGTGTGGATTT
ACCTGTAAAGAATGCTCGCATCTGTAACTAG

Upstream 100 bases:

>100_bases
AGTTTGTGATTAAAAGGGAGAGGGATTGTTATGTAATATTGAATTTTCATAATATAATAAATGTTATTGACGCTAGAAGA
TTGAGGAGGGGATGAAGTAT

Downstream 100 bases:

>100_bases
GCTTTATTAAAGTACTTTTTGTTCCATAAATTAGGTTAGTTGCATAAGAAGGAGAAAATGCACTTTTAATTGAAAGGATT
AAGGTCATTTCAATTAAAGG

Product: glutamate racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MSVCHKHSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFVFEMVEFLKQFPLKALVVACNTA
AAATLAALQEALSIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIQSNMYEKALHELDTYLKVHSHACPTLATVVENRLE
DTAYVTQQVKQALLPLTKEDIDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFF
TTGSVSSFEHIAERWLGYQISVDCVDLPVKNARICN

Sequences:

>Translated_276_residues
MSVCHKHSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFVFEMVEFLKQFPLKALVVACNTA
AAATLAALQEALSIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIQSNMYEKALHELDTYLKVHSHACPTLATVVENRLE
DTAYVTQQVKQALLPLTKEDIDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFF
TTGSVSSFEHIAERWLGYQISVDCVDLPVKNARICN
>Mature_275_residues
SVCHKHSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFVFEMVEFLKQFPLKALVVACNTAA
AATLAALQEALSIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIQSNMYEKALHELDTYLKVHSHACPTLATVVENRLED
TAYVTQQVKQALLPLTKEDIDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFT
TGSVSSFEHIAERWLGYQISVDCVDLPVKNARICN

Specific function: Provides the (R)-glutamate required for cell wall biosynthesis [H]

COG id: COG0796

COG function: function code M; Glutamate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI87082355, Length=223, Percent_Identity=31.8385650224215, Blast_Score=107, Evalue=7e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004391 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: =5.1.1.3 [H]

Molecular weight: Translated: 30185; Mature: 30054

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: PS00924 ASP_GLU_RACEMASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVCHKHSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFVFE
CCCCHHCCEEEECCCCCCHHHHHHHHHHHCCHHCEEEECCCCCCCCCCCCHHHHHHHHHH
MVEFLKQFPLKALVVACNTAAAATLAALQEALSIPVIGVIHPGARAAIKVTKKGKIGVIG
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCEEEEE
TVGTIQSNMYEKALHELDTYLKVHSHACPTLATVVENRLEDTAYVTQQVKQALLPLTKED
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFF
HHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCEEE
TTGSVSSFEHIAERWLGYQISVDCVDLPVKNARICN
ECCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCC
>Mature Secondary Structure 
SVCHKHSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFVFE
CCCHHCCEEEECCCCCCHHHHHHHHHHHCCHHCEEEECCCCCCCCCCCCHHHHHHHHHH
MVEFLKQFPLKALVVACNTAAAATLAALQEALSIPVIGVIHPGARAAIKVTKKGKIGVIG
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCEEEEE
TVGTIQSNMYEKALHELDTYLKVHSHACPTLATVVENRLEDTAYVTQQVKQALLPLTKED
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFF
HHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCEEE
TTGSVSSFEHIAERWLGYQISVDCVDLPVKNARICN
ECCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA