Click here to switch to the map view.

The map label for this gene is licC [H]

Identifier: 218902005

GI number: 218902005

Start: 848886

End: 849719

Strand: Direct

Name: licC [H]

Synonym: BCAH820_0887

Alternate gene names: 218902005

Gene position: 848886-849719 (Clockwise)

Preceding gene: 218902004

Following gene: 218902006

Centisome position: 16.01

GC content: 35.37

Gene sequence:

>834_bases
ATGATTAAGCATAATATCTCAATTAAATTACCAGATAGTGTACCACCAGCAGTTTCAAATTCGTTTGCAGCATTAATTCC
AACGTTAGCAGTTATTCTTTTATTCTGGGGCATTCGCTACGGTTTGAAATTTGATGTAAATACAACAATCACATATTTAA
TCGCACCACTAAAATCAGTATTAGTAGGAAATAATTTATTCGGCGGTTTATTAACAGTATTCTTAATCGTATTCTTCTGG
TCATTCGGTATACATGGCCCTGCGATTTTAGGACCGATCATTCGTCCGATGTGGGATTCAGCAATTCTTGAAAATATGGA
AGTATTCACAGCTACAGGAAATGCACATCAATTACCAAACTTATTTACAGAGCAATTTATTCAATGGTTCGTATGGATTG
GCGGATCAGGCTCAACGTTAGCTTTAGTAATTATGTTTATGTTCTCTAAATCTAAGTTCCTAAAAGAATTAGGTAGATTA
TCATTTGTGCCAGGTTTATTCAATATTAACGAACCGATTATTTTCGGGGCACCAATTGTAATGAATCCAATCTTAATTAT
TCCGTTCGTTATTACACCGTTAGTGACAACGACAGTATCATATTTCGCAGTTGTTTCAGGTATGATTCCATTGATGATGG
CGAAACTGCCATTTACGATGTTAGCACCAATTGCAGCGGTTATTAGTACGGACTGGACAATTATGGCTGGTGTACTTGTA
CTTGTTAACTTTGTTATCTCATTCGTTATTTACTATCCGTTCTTCAAAATGTATGAGAAACAACAATTAGCAGGAGAGGA
GAAAGAAAAATGCTCGGAGCAATTATCATCTTAA

Upstream 100 bases:

>100_bases
TATTGATGCAGGTAGATATATTTCAGTAGGAACATTAAGTGCGACATCTTTATTTGGCGCAATCGTTACAGCTTTAATTG
CAGTAGAAATTTATCACTTT

Downstream 100 bases:

>100_bases
TTACATTTGTAGCAGGGCAGTGTATTGCACATTATTCAAAATGGGTACAAAGTAAATCGTTATTAGTTTTACTATTAGTA
TCAATTGTATTTATCGGTTG

Product: PTS system, lactose/cellobiose family IIC component

Products: protein histidine; sugar phosphate

Alternate protein names: EIIC-Lic; PTS system lichenan-specific EIIC component [H]

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MIKHNISIKLPDSVPPAVSNSFAALIPTLAVILLFWGIRYGLKFDVNTTITYLIAPLKSVLVGNNLFGGLLTVFLIVFFW
SFGIHGPAILGPIIRPMWDSAILENMEVFTATGNAHQLPNLFTEQFIQWFVWIGGSGSTLALVIMFMFSKSKFLKELGRL
SFVPGLFNINEPIIFGAPIVMNPILIIPFVITPLVTTTVSYFAVVSGMIPLMMAKLPFTMLAPIAAVISTDWTIMAGVLV
LVNFVISFVIYYPFFKMYEKQQLAGEEKEKCSEQLSS

Sequences:

>Translated_277_residues
MIKHNISIKLPDSVPPAVSNSFAALIPTLAVILLFWGIRYGLKFDVNTTITYLIAPLKSVLVGNNLFGGLLTVFLIVFFW
SFGIHGPAILGPIIRPMWDSAILENMEVFTATGNAHQLPNLFTEQFIQWFVWIGGSGSTLALVIMFMFSKSKFLKELGRL
SFVPGLFNINEPIIFGAPIVMNPILIIPFVITPLVTTTVSYFAVVSGMIPLMMAKLPFTMLAPIAAVISTDWTIMAGVLV
LVNFVISFVIYYPFFKMYEKQQLAGEEKEKCSEQLSS
>Mature_277_residues
MIKHNISIKLPDSVPPAVSNSFAALIPTLAVILLFWGIRYGLKFDVNTTITYLIAPLKSVLVGNNLFGGLLTVFLIVFFW
SFGIHGPAILGPIIRPMWDSAILENMEVFTATGNAHQLPNLFTEQFIQWFVWIGGSGSTLALVIMFMFSKSKFLKELGRL
SFVPGLFNINEPIIFGAPIVMNPILIIPFVITPLVTTTVSYFAVVSGMIPLMMAKLPFTMLAPIAAVISTDWTIMAGVLV
LVNFVISFVIYYPFFKMYEKQQLAGEEKEKCSEQLSS

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i

COG id: COG1455

COG function: function code G; Phosphotransferase system cellobiose-specific component IIC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIC type-3 domain [H]

Homologues:

Organism=Escherichia coli, GI1788032, Length=291, Percent_Identity=31.6151202749141, Blast_Score=134, Evalue=7e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003352
- InterPro:   IPR004796
- InterPro:   IPR004501 [H]

Pfam domain/function: PF02378 PTS_EIIC [H]

EC number: 2.7.1.69

Molecular weight: Translated: 30711; Mature: 30711

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: PS51105 PTS_EIIC_TYPE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKHNISIKLPDSVPPAVSNSFAALIPTLAVILLFWGIRYGLKFDVNTTITYLIAPLKSV
CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCHHHHHHHHHHHHHH
LVGNNLFGGLLTVFLIVFFWSFGIHGPAILGPIIRPMWDSAILENMEVFTATGNAHQLPN
HHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHEEECCCCHHCHH
LFTEQFIQWFVWIGGSGSTLALVIMFMFSKSKFLKELGRLSFVPGLFNINEPIIFGAPIV
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHH
MNPILIIPFVITPLVTTTVSYFAVVSGMIPLMMAKLPFTMLAPIAAVISTDWTIMAGVLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHH
LVNFVISFVIYYPFFKMYEKQQLAGEEKEKCSEQLSS
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
MIKHNISIKLPDSVPPAVSNSFAALIPTLAVILLFWGIRYGLKFDVNTTITYLIAPLKSV
CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCHHHHHHHHHHHHHH
LVGNNLFGGLLTVFLIVFFWSFGIHGPAILGPIIRPMWDSAILENMEVFTATGNAHQLPN
HHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHEEECCCCHHCHH
LFTEQFIQWFVWIGGSGSTLALVIMFMFSKSKFLKELGRLSFVPGLFNINEPIIFGAPIV
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHH
MNPILIIPFVITPLVTTTVSYFAVVSGMIPLMMAKLPFTMLAPIAAVISTDWTIMAGVLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHH
LVNFVISFVIYYPFFKMYEKQQLAGEEKEKCSEQLSS
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: protein N(pi)-phosphohistidine; sugar

Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8990303; 8969509; 9384377 [H]