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The map label for this gene is yrkF [H]

Identifier: 218901991

GI number: 218901991

Start: 835803

End: 836162

Strand: Direct

Name: yrkF [H]

Synonym: BCAH820_0873

Alternate gene names: 218901991

Gene position: 835803-836162 (Clockwise)

Preceding gene: 218901990

Following gene: 218901992

Centisome position: 15.76

GC content: 33.33

Gene sequence:

>360_bases
ATGAACACAATATTAAGTACGCTTTTCATTGTACTTGCTGCATGGTTTGTTATTTCACGCTTTTTACCTGTGAAAGGTGT
TCAAAATATAAACGGAAAAGAATTAAAAAGTATAGTAGGAAAACAGGGAAAGTACTTTATCGATGTTCGTACAGTAGGTG
AATATAGAGGAAATCATATGAAAGGATTTCAAAACATCCCGCTAAATGACTTAGCTAGTAAGACAAATCAATTAGATAAG
AATAGGGAAGTAATCGTTATTTGTCAGAGCGGAATGAGAAGTAAACAAGCAGCGAAAATGTTAAAAAAATTAGGATTTCA
GCATGTTATCAATGTTTCAGGCGGGATGAATGGTTTGTGA

Upstream 100 bases:

>100_bases
AAGTGGCCATGACATCGTAAAGCATGAAGAGGAAGGCGATGTGCTGAAGTTTTGGATTAAGAAGGCGTAGTATTTTTATA
AATGTAGAGAGGTTGGTTAT

Downstream 100 bases:

>100_bases
GGAGGAAATGTAAAATGAAAGAAATGACAGCAAAAGAATTAGAAGAAAAATTGTTATGTAAAGAAGCAGTGAATATCGTA
GACGTACGTGAAGTAGAAGA

Product: rhodanese-like domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MNTILSTLFIVLAAWFVISRFLPVKGVQNINGKELKSIVGKQGKYFIDVRTVGEYRGNHMKGFQNIPLNDLASKTNQLDK
NREVIVICQSGMRSKQAAKMLKKLGFQHVINVSGGMNGL

Sequences:

>Translated_119_residues
MNTILSTLFIVLAAWFVISRFLPVKGVQNINGKELKSIVGKQGKYFIDVRTVGEYRGNHMKGFQNIPLNDLASKTNQLDK
NREVIVICQSGMRSKQAAKMLKKLGFQHVINVSGGMNGL
>Mature_119_residues
MNTILSTLFIVLAAWFVISRFLPVKGVQNINGKELKSIVGKQGKYFIDVRTVGEYRGNHMKGFQNIPLNDLASKTNQLDK
NREVIVICQSGMRSKQAAKMLKKLGFQHVINVSGGMNGL

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763
- InterPro:   IPR001455 [H]

Pfam domain/function: PF00581 Rhodanese; PF01206 SirA [H]

EC number: NA

Molecular weight: Translated: 13252; Mature: 13252

Theoretical pI: Translated: 10.96; Mature: 10.96

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTILSTLFIVLAAWFVISRFLPVKGVQNINGKELKSIVGKQGKYFIDVRTVGEYRGNHM
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCHHCCCCC
KGFQNIPLNDLASKTNQLDKNREVIVICQSGMRSKQAAKMLKKLGFQHVINVSGGMNGL
CCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCHHHEEECCCCCCCC
>Mature Secondary Structure
MNTILSTLFIVLAAWFVISRFLPVKGVQNINGKELKSIVGKQGKYFIDVRTVGEYRGNHM
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCHHCCCCC
KGFQNIPLNDLASKTNQLDKNREVIVICQSGMRSKQAAKMLKKLGFQHVINVSGGMNGL
CCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCHHHEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]