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The map label for this gene is yrkD [H]

Identifier: 218901987

GI number: 218901987

Start: 833421

End: 833684

Strand: Direct

Name: yrkD [H]

Synonym: BCAH820_0869

Alternate gene names: 218901987

Gene position: 833421-833684 (Clockwise)

Preceding gene: 218901986

Following gene: 218901988

Centisome position: 15.72

GC content: 35.98

Gene sequence:

>264_bases
ATGGAATATAATCAAGATATGAAAAATAGATTGAAACGTATTGAAGGTCAAGTTCGTGGCGTGCTTCGTATGATGGAAGA
AGGAAAAGATTGCCGAGAGGTTATTACACAGTTAACGGCATCTCGTTCTGCACTTGATCGTACAATTGGCCTCGTTGTTG
GAACAAATTTAGAGCAATGTTTACGTGAACAGTTTGAAAGTGGTAATGGTTCAAATGAAGAATTAATTAAAGAAGCTGTT
CAATTACTTGTAAAAAGCCGATAA

Upstream 100 bases:

>100_bases
AATAAAATTTTAAAATAGGGGTTTACAAAATACCCTACAGGGTATAATATATTGTCATAAGTTATAAATAGTGACATAAT
GGTAATGAGGTGATTATACA

Downstream 100 bases:

>100_bases
TCTGTCAAACGTAAGTGTTGACAGATTTTCAAAAACATTTTATTATACCCCTACAGGTATATGTATATAAGTTGTGGAGG
AATCGACTATGAGTATAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MEYNQDMKNRLKRIEGQVRGVLRMMEEGKDCREVITQLTASRSALDRTIGLVVGTNLEQCLREQFESGNGSNEELIKEAV
QLLVKSR

Sequences:

>Translated_87_residues
MEYNQDMKNRLKRIEGQVRGVLRMMEEGKDCREVITQLTASRSALDRTIGLVVGTNLEQCLREQFESGNGSNEELIKEAV
QLLVKSR
>Mature_87_residues
MEYNQDMKNRLKRIEGQVRGVLRMMEEGKDCREVITQLTASRSALDRTIGLVVGTNLEQCLREQFESGNGSNEELIKEAV
QLLVKSR

Specific function: Unknown

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 9942; Mature: 9942

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYNQDMKNRLKRIEGQVRGVLRMMEEGKDCREVITQLTASRSALDRTIGLVVGTNLEQC
CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LREQFESGNGSNEELIKEAVQLLVKSR
HHHHHHCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEYNQDMKNRLKRIEGQVRGVLRMMEEGKDCREVITQLTASRSALDRTIGLVVGTNLEQC
CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LREQFESGNGSNEELIKEAVQLLVKSR
HHHHHHCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]