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The map label for this gene is cisA [H]

Identifier: 218901971

GI number: 218901971

Start: 813536

End: 815020

Strand: Direct

Name: cisA [H]

Synonym: BCAH820_0853

Alternate gene names: 218901971

Gene position: 813536-815020 (Clockwise)

Preceding gene: 218901970

Following gene: 218901972

Centisome position: 15.34

GC content: 31.52

Gene sequence:

>1485_bases
TTGAAACGAACAGTTGCTTATTATAGAAGTTCAACAACGCTCCAAGAGAATTCGATTGTAATGCAACGCTCAAAAGTGGT
TCATTACAGTGTCCAAAAGAAATTACCAATTCATGAAGAATATACAGATGAATATGTATCATCTCGAAAGGTTACATTGT
TAGATCGTCCTAATATGGCGCGGTTAATACAAGATATTAAAGAGGGAACGATTGAACGAATTCTTGTATATAAGAGAGAT
CGATTAGCTAGAAATTTAAATGAACACTTGGAACTATATAAGTTGTTCAAAGAGTATAATATTGAAGTTTGTTTTGCATC
TGAAAATGAAATTGCTATGACGTATACTGCAATCGGTGAATATCTTGAGTGTATTTTAGGTGCCATGAATGAGCATGAAG
GAAAACAAATTGCTGAACGGATTATGGAAACTAGAATTGCGAATTTTATATCAGGTAAATCATCAGGTAATGTGCCTTTT
GGTTATGAAACGAAAAAACGTGAGGACAATAGTACATTTATTGAACGTATAGAACCAGAGCTAAAGATTGTAAGAGAAAT
ATATGATGCAATTTTGAGTGATAAATATAAAACATTACAGGAACTGTATCGTGATTTTAATTCACAAGGAAAGCTGAAGA
GGAAAACAAGTTGGCATCAACAACTTATCCTTGAAACAGTGTCTAATCCGTTGTACATGGGAACGCAAAAAATGAATTCA
AATAATCAGTCGATACCTAGGTATTTAACTGAATTGTCGATTGTTAATGAAGAAGAGTGGAACGAAGCCAACGATAAAAT
TTTAGGTATGCTAGTTAAACGAAAGCCTAATGTAGCTAAATTTCGGTTTCCGTTAAAAGAAATCCTGCAATGTTATGAAT
GCCGAAAAGATTTGACTACGAATGAAAGAATGCGAAATAGGAAAAAGTATAAAGTTTATGAATGTAAAGAGCATAATGTA
TTTGTAGTAGCTGATAGCATCGAAAAAGATATTATAAGACATGGAAAAGAGTTTTTTACAAAGATGCTTCGAAGCGATTT
TGAAAAATTATATAAACGTAGTCAACAGAAAAGTGTTGAACAGCTACAAAAATGGATAAAAGAACAGGAAAGAATAGTAA
GTAATCAAGAAATAAAGCTTGCGAAAAAAATTGATCGATGGTTAAAAAACGAAAGCGTCCATCATAAAAAAGAAATGGAT
TTGACTTACGATGAGTTGAAAGAAGAGAAAAATCGATTAGTGAAGTTACAAAAAAGATTATATGAAATCAAGCATATTAA
AGAACAAGCGCAGCAATGGTGTAATGATTTGAAATATGAAAATATCATTTTGGAATTAAGCGAAGAAAAACGAAAAGAAT
TTTATCGTGACATAATTGAAGTGATTTATATCAGTGATTATGAGTATCATATTATTTTTAAACATCCTTTTATGATGGTA
CAGGAGGTTTATTGTGAGCCAGAAAATAGCTTATCAACGTCTTGA

Upstream 100 bases:

>100_bases
ATTTATATATCGAGTGCGTAAAAGAAAAGGTACTAAAAGAAACTTCTAAAAATGATGGACAAGCGTATATTGAAAATAAA
GAAGGAGGTGAGTTTCAGTA

Downstream 100 bases:

>100_bases
AGACATATTGAAAAAGGGAAGTAGAATAGCGCTTTACGCACGATATTCCACGGGTAAACAAGATGAGAATGCGCAAATCC
ACTCTGTAAGAAATTTTTTA

Product: DNA recombinase, putative

Products: NA

Alternate protein names: Stage IV sporulation protein CA [H]

Number of amino acids: Translated: 494; Mature: 494

Protein sequence:

>494_residues
MKRTVAYYRSSTTLQENSIVMQRSKVVHYSVQKKLPIHEEYTDEYVSSRKVTLLDRPNMARLIQDIKEGTIERILVYKRD
RLARNLNEHLELYKLFKEYNIEVCFASENEIAMTYTAIGEYLECILGAMNEHEGKQIAERIMETRIANFISGKSSGNVPF
GYETKKREDNSTFIERIEPELKIVREIYDAILSDKYKTLQELYRDFNSQGKLKRKTSWHQQLILETVSNPLYMGTQKMNS
NNQSIPRYLTELSIVNEEEWNEANDKILGMLVKRKPNVAKFRFPLKEILQCYECRKDLTTNERMRNRKKYKVYECKEHNV
FVVADSIEKDIIRHGKEFFTKMLRSDFEKLYKRSQQKSVEQLQKWIKEQERIVSNQEIKLAKKIDRWLKNESVHHKKEMD
LTYDELKEEKNRLVKLQKRLYEIKHIKEQAQQWCNDLKYENIILELSEEKRKEFYRDIIEVIYISDYEYHIIFKHPFMMV
QEVYCEPENSLSTS

Sequences:

>Translated_494_residues
MKRTVAYYRSSTTLQENSIVMQRSKVVHYSVQKKLPIHEEYTDEYVSSRKVTLLDRPNMARLIQDIKEGTIERILVYKRD
RLARNLNEHLELYKLFKEYNIEVCFASENEIAMTYTAIGEYLECILGAMNEHEGKQIAERIMETRIANFISGKSSGNVPF
GYETKKREDNSTFIERIEPELKIVREIYDAILSDKYKTLQELYRDFNSQGKLKRKTSWHQQLILETVSNPLYMGTQKMNS
NNQSIPRYLTELSIVNEEEWNEANDKILGMLVKRKPNVAKFRFPLKEILQCYECRKDLTTNERMRNRKKYKVYECKEHNV
FVVADSIEKDIIRHGKEFFTKMLRSDFEKLYKRSQQKSVEQLQKWIKEQERIVSNQEIKLAKKIDRWLKNESVHHKKEMD
LTYDELKEEKNRLVKLQKRLYEIKHIKEQAQQWCNDLKYENIILELSEEKRKEFYRDIIEVIYISDYEYHIIFKHPFMMV
QEVYCEPENSLSTS
>Mature_494_residues
MKRTVAYYRSSTTLQENSIVMQRSKVVHYSVQKKLPIHEEYTDEYVSSRKVTLLDRPNMARLIQDIKEGTIERILVYKRD
RLARNLNEHLELYKLFKEYNIEVCFASENEIAMTYTAIGEYLECILGAMNEHEGKQIAERIMETRIANFISGKSSGNVPF
GYETKKREDNSTFIERIEPELKIVREIYDAILSDKYKTLQELYRDFNSQGKLKRKTSWHQQLILETVSNPLYMGTQKMNS
NNQSIPRYLTELSIVNEEEWNEANDKILGMLVKRKPNVAKFRFPLKEILQCYECRKDLTTNERMRNRKKYKVYECKEHNV
FVVADSIEKDIIRHGKEFFTKMLRSDFEKLYKRSQQKSVEQLQKWIKEQERIVSNQEIKLAKKIDRWLKNESVHHKKEMD
LTYDELKEEKNRLVKLQKRLYEIKHIKEQAQQWCNDLKYENIILELSEEKRKEFYRDIIEVIYISDYEYHIIFKHPFMMV
QEVYCEPENSLSTS

Specific function: Putative site-specific recombinase having a very important role in sporulation. It probably plays a role in the recombination of spoIIIC and spoIVCB to form sigma K factor [H]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 recombinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011109
- InterPro:   IPR006118
- InterPro:   IPR006119 [H]

Pfam domain/function: PF07508 Recombinase; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 59452; Mature: 59452

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTVAYYRSSTTLQENSIVMQRSKVVHYSVQKKLPIHEEYTDEYVSSRKVTLLDRPNMA
CCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEECCCCHH
RLIQDIKEGTIERILVYKRDRLARNLNEHLELYKLFKEYNIEVCFASENEIAMTYTAIGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEHHHHHHH
YLECILGAMNEHEGKQIAERIMETRIANFISGKSSGNVPFGYETKKREDNSTFIERIEPE
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCHH
LKIVREIYDAILSDKYKTLQELYRDFNSQGKLKRKTSWHQQLILETVSNPLYMGTQKMNS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEECCHHCCC
NNQSIPRYLTELSIVNEEEWNEANDKILGMLVKRKPNVAKFRFPLKEILQCYECRKDLTT
CCCHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHCCCC
NERMRNRKKYKVYECKEHNVFVVADSIEKDIIRHGKEFFTKMLRSDFEKLYKRSQQKSVE
HHHHHCCCCCEEEEECCCCEEEEECHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
QLQKWIKEQERIVSNQEIKLAKKIDRWLKNESVHHKKEMDLTYDELKEEKNRLVKLQKRL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHH
YEIKHIKEQAQQWCNDLKYENIILELSEEKRKEFYRDIIEVIYISDYEYHIIFKHPFMMV
HHHHHHHHHHHHHHHHCCHHHHHEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHH
QEVYCEPENSLSTS
HHHHCCCCCCCCCC
>Mature Secondary Structure
MKRTVAYYRSSTTLQENSIVMQRSKVVHYSVQKKLPIHEEYTDEYVSSRKVTLLDRPNMA
CCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEECCCCHH
RLIQDIKEGTIERILVYKRDRLARNLNEHLELYKLFKEYNIEVCFASENEIAMTYTAIGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEHHHHHHH
YLECILGAMNEHEGKQIAERIMETRIANFISGKSSGNVPFGYETKKREDNSTFIERIEPE
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCHH
LKIVREIYDAILSDKYKTLQELYRDFNSQGKLKRKTSWHQQLILETVSNPLYMGTQKMNS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEECCHHCCC
NNQSIPRYLTELSIVNEEEWNEANDKILGMLVKRKPNVAKFRFPLKEILQCYECRKDLTT
CCCHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHCCCC
NERMRNRKKYKVYECKEHNVFVVADSIEKDIIRHGKEFFTKMLRSDFEKLYKRSQQKSVE
HHHHHCCCCCEEEEECCCCEEEEECHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
QLQKWIKEQERIVSNQEIKLAKKIDRWLKNESVHHKKEMDLTYDELKEEKNRLVKLQKRL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHH
YEIKHIKEQAQQWCNDLKYENIILELSEEKRKEFYRDIIEVIYISDYEYHIIFKHPFMMV
HHHHHHHHHHHHHHHHCCHHHHHEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHH
QEVYCEPENSLSTS
HHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2105293; 7704261; 8969508; 9384377 [H]