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The map label for this gene is spoVR [H]

Identifier: 218901956

GI number: 218901956

Start: 795895

End: 796704

Strand: Direct

Name: spoVR [H]

Synonym: BCAH820_0838

Alternate gene names: 218901956

Gene position: 795895-796704 (Clockwise)

Preceding gene: 218901955

Following gene: 218901957

Centisome position: 15.01

GC content: 37.41

Gene sequence:

>810_bases
ATGAGAGCAAGTGACGATAAAGCACTGCAATATGCGATTGCGGAAATTACGGAAATTGCGACTGGATTTGGGCTTGATTT
TTATCCGATGCGTTATGAAATATGTCCAGCGGAAATTATTTATACATTTGGTGCATATGGGATGCCGACGCGTTTTTCAC
ATTGGAGTTTTGGAAAACAGTTTTTCAGAATGAAATTACAATACGATTTAGGTCTTAGCAAAATATACGAACTCGTTATT
AACTCTGATCCATGTTATGCCTTTTTATTAGATACGAACTCGTTAATTCAAAATAAATTAATCGTAGCACACGTGTTAGC
GCACTGTGATTTCTTTAAAAATAATATTCGTTTTTCAAATACGAAGCGAGATATGGTAGAAAGTATGTCAGCAACAGCTG
AACGGGTGAAAGCATATGAGCATAAATACGGAAAAGAAGAGGTAGAAACATTTTTAGATGCCGTACTTGCTATTCAAGAG
CATATTGATCCGTCGCTTATGCGTCCGAAACTGGCGTGGAGTATTGATGATTTAGAAGAGGAAGAAGTAGAGAAGAAAAA
GGCATCGCAATATGATGACCTATGGAATTTAGATAATCGAAATAAAAAGCAGGAACGCTCCAATGTACGTAAAAAGAAGA
AAATCCCACCGCAACCAGAAAAAGATTTACTCCTCTTTATTGAAGAATATAGCCGTGAGTTAGAAGATTGGCAGCGAGAC
ATATTAACGATGATGCGTGAAGAAATGTTATATTTCTGGCCGCAGCTTGAAACAAAGATCATGAACGAAGGCTGGGCTTC
GTATTGCTAA

Upstream 100 bases:

>100_bases
CGTTTTTTATGAGGGTGTCTTTTTATTATGCAATCAATCCTCATGAAAGCTTGTTCTCAATCATACACTTTCTTAAGGGA
AAGTGTAAGGAGGGAAAATA

Downstream 100 bases:

>100_bases
GGTGCTTTTAATATAAATTTGTGCATCTATTGTTAAAAAATAGCCATGTATCGTATTATGAGGTACTATAATTGTTTTAT
ATTTATATAAAGATATCACG

Product: stage V sporulation protein R

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MRASDDKALQYAIAEITEIATGFGLDFYPMRYEICPAEIIYTFGAYGMPTRFSHWSFGKQFFRMKLQYDLGLSKIYELVI
NSDPCYAFLLDTNSLIQNKLIVAHVLAHCDFFKNNIRFSNTKRDMVESMSATAERVKAYEHKYGKEEVETFLDAVLAIQE
HIDPSLMRPKLAWSIDDLEEEEVEKKKASQYDDLWNLDNRNKKQERSNVRKKKKIPPQPEKDLLLFIEEYSRELEDWQRD
ILTMMREEMLYFWPQLETKIMNEGWASYC

Sequences:

>Translated_269_residues
MRASDDKALQYAIAEITEIATGFGLDFYPMRYEICPAEIIYTFGAYGMPTRFSHWSFGKQFFRMKLQYDLGLSKIYELVI
NSDPCYAFLLDTNSLIQNKLIVAHVLAHCDFFKNNIRFSNTKRDMVESMSATAERVKAYEHKYGKEEVETFLDAVLAIQE
HIDPSLMRPKLAWSIDDLEEEEVEKKKASQYDDLWNLDNRNKKQERSNVRKKKKIPPQPEKDLLLFIEEYSRELEDWQRD
ILTMMREEMLYFWPQLETKIMNEGWASYC
>Mature_269_residues
MRASDDKALQYAIAEITEIATGFGLDFYPMRYEICPAEIIYTFGAYGMPTRFSHWSFGKQFFRMKLQYDLGLSKIYELVI
NSDPCYAFLLDTNSLIQNKLIVAHVLAHCDFFKNNIRFSNTKRDMVESMSATAERVKAYEHKYGKEEVETFLDAVLAIQE
HIDPSLMRPKLAWSIDDLEEEEVEKKKASQYDDLWNLDNRNKKQERSNVRKKKKIPPQPEKDLLLFIEEYSRELEDWQRD
ILTMMREEMLYFWPQLETKIMNEGWASYC

Specific function: Appears to be involved in spore cortex formation [H]

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ycgB [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=266, Percent_Identity=33.8345864661654, Blast_Score=157, Evalue=5e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 31905; Mature: 31905

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRASDDKALQYAIAEITEIATGFGLDFYPMRYEICPAEIIYTFGAYGMPTRFSHWSFGKQ
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHCCCCCCCCCCCHHHHHH
FFRMKLQYDLGLSKIYELVINSDPCYAFLLDTNSLIQNKLIVAHVLAHCDFFKNNIRFSN
HHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TKRDMVESMSATAERVKAYEHKYGKEEVETFLDAVLAIQEHIDPSLMRPKLAWSIDDLEE
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHCCHHHCCCCCCCH
EEVEKKKASQYDDLWNLDNRNKKQERSNVRKKKKIPPQPEKDLLLFIEEYSRELEDWQRD
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
ILTMMREEMLYFWPQLETKIMNEGWASYC
HHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRASDDKALQYAIAEITEIATGFGLDFYPMRYEICPAEIIYTFGAYGMPTRFSHWSFGKQ
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHCCCCCCCCCCCHHHHHH
FFRMKLQYDLGLSKIYELVINSDPCYAFLLDTNSLIQNKLIVAHVLAHCDFFKNNIRFSN
HHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TKRDMVESMSATAERVKAYEHKYGKEEVETFLDAVLAIQEHIDPSLMRPKLAWSIDDLEE
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHCCHHHCCCCCCCH
EEVEKKKASQYDDLWNLDNRNKKQERSNVRKKKKIPPQPEKDLLLFIEEYSRELEDWQRD
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
ILTMMREEMLYFWPQLETKIMNEGWASYC
HHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8144469; 9579061; 9384377 [H]