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The map label for this gene is yqjB [H]

Identifier: 218901943

GI number: 218901943

Start: 787178

End: 787939

Strand: Direct

Name: yqjB [H]

Synonym: BCAH820_0825

Alternate gene names: 218901943

Gene position: 787178-787939 (Clockwise)

Preceding gene: 218901942

Following gene: 218901944

Centisome position: 14.84

GC content: 34.12

Gene sequence:

>762_bases
ATGAAAAAAATTTGTTTCGTCATACTATTATTTTTCATCCTACCGGTTAGTGCTTTTGCTAATACAGATCATTTAATATT
AGTGAATCTTACGACAAATCAGTTGTCTTTTTTTGAAAATGGAAATTATACAAAAACATTCCCCGTAACAACTGGAAGAG
ATCGTACACCTACACCTGAAGGTAATTTTTGTATTATAAATAAATATAAAAATAAAGAATACCATCGAAAAAAAATAGCT
GGGGGTGCACCGAATAACCCTCTTGGTACGAGATGGCTTGGCCTAGATAAAAATGAATATGCGATTCATGGGACAAATCG
GGAATGGACGATTGGAAGTAGGGAATCAAATGGGTGTATTCGCATGCATGACAGGGATATACAGTGGTTATATGATCGAG
TCCATTTACAAACAAAAGTAATCATTTCTCGTTTTCATACGAGCCCCGAATATGAAGCGAATAAACTTGGTTACCGCGTT
GTGAGTTGGAATGGTCGTAAAATAGAAGAAGAACAAATTGGTATACTTACGTTAGTAGACCGCGTGGATATATATTGGCA
AGAACCAAATGGGCAGTTAACGAAAGTGAAAACGGTATTGCCAAACGAAAGATATGCAGTGTACTCAAAACGAAAAGATG
GAATATATTATATAGGAAACAATTTGTATATTGTGGGTGAAACAGGAGAAAAAATTCGTTATGAGCAAATTCCTTCTTCT
ATTTTAAGTAATATATATAAAAGGAAATATAATGTTCCGTAA

Upstream 100 bases:

>100_bases
ACATGTAAATGGGGGCGTTATTGTAAATGGATAGTTTTCATTTATAAGAGCAAAGTAAAGTTAATTCCACTTATTATAGT
GAGCGCTAGGGGGGATATAG

Downstream 100 bases:

>100_bases
TGGCTACCGTATTATAGACGGTAGCTTATTTCTACTTTGAGTTTAACTGCAACTATTGTATTTTGCTGAATATAATACAG
TACGGATAGGGGGGCGGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MKKICFVILLFFILPVSAFANTDHLILVNLTTNQLSFFENGNYTKTFPVTTGRDRTPTPEGNFCIINKYKNKEYHRKKIA
GGAPNNPLGTRWLGLDKNEYAIHGTNREWTIGSRESNGCIRMHDRDIQWLYDRVHLQTKVIISRFHTSPEYEANKLGYRV
VSWNGRKIEEEQIGILTLVDRVDIYWQEPNGQLTKVKTVLPNERYAVYSKRKDGIYYIGNNLYIVGETGEKIRYEQIPSS
ILSNIYKRKYNVP

Sequences:

>Translated_253_residues
MKKICFVILLFFILPVSAFANTDHLILVNLTTNQLSFFENGNYTKTFPVTTGRDRTPTPEGNFCIINKYKNKEYHRKKIA
GGAPNNPLGTRWLGLDKNEYAIHGTNREWTIGSRESNGCIRMHDRDIQWLYDRVHLQTKVIISRFHTSPEYEANKLGYRV
VSWNGRKIEEEQIGILTLVDRVDIYWQEPNGQLTKVKTVLPNERYAVYSKRKDGIYYIGNNLYIVGETGEKIRYEQIPSS
ILSNIYKRKYNVP
>Mature_253_residues
MKKICFVILLFFILPVSAFANTDHLILVNLTTNQLSFFENGNYTKTFPVTTGRDRTPTPEGNFCIINKYKNKEYHRKKIA
GGAPNNPLGTRWLGLDKNEYAIHGTNREWTIGSRESNGCIRMHDRDIQWLYDRVHLQTKVIISRFHTSPEYEANKLGYRV
VSWNGRKIEEEQIGILTLVDRVDIYWQEPNGQLTKVKTVLPNERYAVYSKRKDGIYYIGNNLYIVGETGEKIRYEQIPSS
ILSNIYKRKYNVP

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 29488; Mature: 29488

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKICFVILLFFILPVSAFANTDHLILVNLTTNQLSFFENGNYTKTFPVTTGRDRTPTPE
CCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEECCCEEEEECCCCCCCCCCCCC
GNFCIINKYKNKEYHRKKIAGGAPNNPLGTRWLGLDKNEYAIHGTNREWTIGSRESNGCI
CCEEEEECCCCCHHHHHHHCCCCCCCCCCCEEECCCCCCEEEECCCCEEEECCCCCCCEE
RMHDRDIQWLYDRVHLQTKVIISRFHTSPEYEANKLGYRVVSWNGRKIEEEQIGILTLVD
EEECCCHHHHHHHHHHHHHEEEHHHCCCCCCCCCCCEEEEEECCCCEECHHHCCEEEEEE
RVDIYWQEPNGQLTKVKTVLPNERYAVYSKRKDGIYYIGNNLYIVGETGEKIRYEQIPSS
EEEEEEECCCCCEEEEEEECCCCEEEEEEECCCCEEEECCEEEEEECCCCEEEHHHHHHH
ILSNIYKRKYNVP
HHHHHHHHCCCCC
>Mature Secondary Structure
MKKICFVILLFFILPVSAFANTDHLILVNLTTNQLSFFENGNYTKTFPVTTGRDRTPTPE
CCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEECCCEEEEECCCCCCCCCCCCC
GNFCIINKYKNKEYHRKKIAGGAPNNPLGTRWLGLDKNEYAIHGTNREWTIGSRESNGCI
CCEEEEECCCCCHHHHHHHCCCCCCCCCCCEEECCCCCCEEEECCCCEEEECCCCCCCEE
RMHDRDIQWLYDRVHLQTKVIISRFHTSPEYEANKLGYRVVSWNGRKIEEEQIGILTLVD
EEECCCHHHHHHHHHHHHHEEEHHHCCCCCCCCCCCEEEEEECCCCEECHHHCCEEEEEE
RVDIYWQEPNGQLTKVKTVLPNERYAVYSKRKDGIYYIGNNLYIVGETGEKIRYEQIPSS
EEEEEEECCCCCEEEEEEECCCCEEEEEEECCCCEEEECCEEEEEECCCCEEEHHHHHHH
ILSNIYKRKYNVP
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]