Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884732

Identifier: 218884732

GI number: 218884732

Start: 1318793

End: 1319296

Strand: Direct

Name: 218884732

Synonym: DKAM_1421

Alternate gene names: NA

Gene position: 1318793-1319296 (Clockwise)

Preceding gene: 218884731

Following gene: 218884737

Centisome position: 96.6

GC content: 40.28

Gene sequence:

>504_bases
ATGAGTAACACATATATCCGCTTAATTAAAGAGGAATTACAGGCATCAAAGTGTACCCCTGTCCAGAAGATTAGACTAGA
TGAAGTAAACGAGTTAATCAGGAGATCTCTGTTCAAACTGCCTCTATTAAACCCTGAGAGTAGGGAATTATTTATCGAGA
TGATTAATAAAATGGCCTTGGATACTGAATACTTAAGCAGATTGAGGATAACTAAAGTAGCACTTGGCTCACCGCTCCCA
GCCGACACCATAGATGAAGGCGTCTTGAAAGCCGTTGAAAACATTATCAAGTTGGAGAAAGAACTCTTATACCCCCTTCC
GGTGAGGTACCGTGATAAAACGCTGGTTTTATTTATAAAGGATTGTGAAGTAAGTGGCGAGAAGTATAGGAGGAATGATG
TAGCGCTTCTATCATTTAACGAGCTACTCGTAGCAATGATACAGGAATGCGTGAAGCCGCTGAGACATATATTAATGGTT
AGTGAGGAAGAAAAGTCTTCCTGA

Upstream 100 bases:

>100_bases
GAAAGGGAGAAATAATTAGATTAGAGGCACCCTATGCCCTATATCTAGCTGTCAATGGGCTAGTAGAGGTAAGGGATTCA
TCGGGGATTGAGGTAAAACT

Downstream 100 bases:

>100_bases
GGAGGTTCAAGGTGATAGTTCATCTTTCTACATGGCTGCTTTCATATAGTAATATCCTAACAGTATGTATGCCACTATGA
TCATTATTAACAATATGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MSNTYIRLIKEELQASKCTPVQKIRLDEVNELIRRSLFKLPLLNPESRELFIEMINKMALDTEYLSRLRITKVALGSPLP
ADTIDEGVLKAVENIIKLEKELLYPLPVRYRDKTLVLFIKDCEVSGEKYRRNDVALLSFNELLVAMIQECVKPLRHILMV
SEEEKSS

Sequences:

>Translated_167_residues
MSNTYIRLIKEELQASKCTPVQKIRLDEVNELIRRSLFKLPLLNPESRELFIEMINKMALDTEYLSRLRITKVALGSPLP
ADTIDEGVLKAVENIIKLEKELLYPLPVRYRDKTLVLFIKDCEVSGEKYRRNDVALLSFNELLVAMIQECVKPLRHILMV
SEEEKSS
>Mature_166_residues
SNTYIRLIKEELQASKCTPVQKIRLDEVNELIRRSLFKLPLLNPESRELFIEMINKMALDTEYLSRLRITKVALGSPLPA
DTIDEGVLKAVENIIKLEKELLYPLPVRYRDKTLVLFIKDCEVSGEKYRRNDVALLSFNELLVAMIQECVKPLRHILMVS
EEEKSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19362; Mature: 19231

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNTYIRLIKEELQASKCTPVQKIRLDEVNELIRRSLFKLPLLNPESRELFIEMINKMAL
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC
DTEYLSRLRITKVALGSPLPADTIDEGVLKAVENIIKLEKELLYPLPVRYRDKTLVLFIK
CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE
DCEVSGEKYRRNDVALLSFNELLVAMIQECVKPLRHILMVSEEEKSS
CCCCCCCHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SNTYIRLIKEELQASKCTPVQKIRLDEVNELIRRSLFKLPLLNPESRELFIEMINKMAL
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC
DTEYLSRLRITKVALGSPLPADTIDEGVLKAVENIIKLEKELLYPLPVRYRDKTLVLFIK
CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE
DCEVSGEKYRRNDVALLSFNELLVAMIQECVKPLRHILMVSEEEKSS
CCCCCCCHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA