| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884609
Identifier: 218884609
GI number: 218884609
Start: 1216217
End: 1217281
Strand: Direct
Name: 218884609
Synonym: DKAM_1298
Alternate gene names: NA
Gene position: 1216217-1217281 (Clockwise)
Preceding gene: 218884607
Following gene: 218884610
Centisome position: 89.09
GC content: 42.63
Gene sequence:
>1065_bases TTGAATATATTATACATCTTTATTGCTTCACTGCTAGCGTTTTGGGTTGTCGTGAACTTGTTTTATAGGTACTTCCTTGC GGGTAAGTATAGTAGTATTGAGATACATGGGTATGTAGTGTTAGTGATCAAGAGAAAGACAGAGGGGAGGGCTTCTCCCT CTGGGGAGGCTAGGTTGCTGCATAATATAGTTCTAACAATACTCTACTTCGTCTCCCTGACTCTATTCTTCTATATGGTG GCTATCTCCATACTCAATAGGCTCTATATAGGTAGTACAGGGGTTGTAGTACTCGTACCCGGGGTAAACGTTGTTGGCAT GGATGCATTACTATTCATTATTGCTGCAAGCATTAGTGCATCACTACATGAACTCTTCCATGCGCGGTTGGCTATAAGGA ACGGTATACCAGTTAAATCCTTCGGCATCATGCTCGCCCTCATCATACCACTCGCATACGTGGAGGTTGAGGAAGAGGAG TTCCGGAGAACTAGGATTTTAAAGCGTCTCGGAGTTCTTTCAGCTGGTGTCGCGGTAAACCTTATCCTAGCAACAGTATC CCTTGTACTATTAACACTAGCAACGTCTCCAATAGGTATGTTAGTGACCGATGTGGAACCAGGGAGCCCAGCATACAGAT ATGGTATACATGCATACGATGTGATTACGAGTATAAATGGGAGTCTGGTTAAAAGTATAAACGATATACCTGTTGTCAAG ATGATCGCAAAGCCGACATCGCTTAATTTAACTGTTTGGAGAAGGGATACAGGTTACGTGAATTTAGTCATCCCTATTGG AGTGAATGATGAGAAGATAGGGATATACTTGTCTAGCTCGCCTAGAATAGAGCTCCTCGAGTACTTAGGCGGGTTACCCG CGTTCCTACTCTACAAGTTCTTACTATGGATGTACACGATTAACTTAAGCCTCTCAATACTTAATGCCGCACCATTATTC ATAACCGATGGTGGTAGAATAATCAACGAGCTCGCTGGAAACAAGTATGGAAACATAATAAACATCATCGGCGTAATAAT ACTGCTCTTAATACTGCTCCCATAG
Upstream 100 bases:
>100_bases TATATATTGGCGACTGACTCAATTTATCATATATGAGTGATTCAAGGTATTAAATAGGGTGGAGGGTATTATACTTTGAA GAATATATCTGGTGAAACGC
Downstream 100 bases:
>100_bases AACCATGAAAACATGATTAATAATCTCTGATGCAATAATATCATTATGCCGTGGACGTAGGGAGGGCCCGGCTCTAGCCG GGTCAGATAACCATGGATCA
Product: peptidase M50
Products: NA
Alternate protein names: Membrane-Associated Metalloprotease; S2P Metalloprotease; Peptidase
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MNILYIFIASLLAFWVVVNLFYRYFLAGKYSSIEIHGYVVLVIKRKTEGRASPSGEARLLHNIVLTILYFVSLTLFFYMV AISILNRLYIGSTGVVVLVPGVNVVGMDALLFIIAASISASLHELFHARLAIRNGIPVKSFGIMLALIIPLAYVEVEEEE FRRTRILKRLGVLSAGVAVNLILATVSLVLLTLATSPIGMLVTDVEPGSPAYRYGIHAYDVITSINGSLVKSINDIPVVK MIAKPTSLNLTVWRRDTGYVNLVIPIGVNDEKIGIYLSSSPRIELLEYLGGLPAFLLYKFLLWMYTINLSLSILNAAPLF ITDGGRIINELAGNKYGNIINIIGVIILLLILLP
Sequences:
>Translated_354_residues MNILYIFIASLLAFWVVVNLFYRYFLAGKYSSIEIHGYVVLVIKRKTEGRASPSGEARLLHNIVLTILYFVSLTLFFYMV AISILNRLYIGSTGVVVLVPGVNVVGMDALLFIIAASISASLHELFHARLAIRNGIPVKSFGIMLALIIPLAYVEVEEEE FRRTRILKRLGVLSAGVAVNLILATVSLVLLTLATSPIGMLVTDVEPGSPAYRYGIHAYDVITSINGSLVKSINDIPVVK MIAKPTSLNLTVWRRDTGYVNLVIPIGVNDEKIGIYLSSSPRIELLEYLGGLPAFLLYKFLLWMYTINLSLSILNAAPLF ITDGGRIINELAGNKYGNIINIIGVIILLLILLP >Mature_354_residues MNILYIFIASLLAFWVVVNLFYRYFLAGKYSSIEIHGYVVLVIKRKTEGRASPSGEARLLHNIVLTILYFVSLTLFFYMV AISILNRLYIGSTGVVVLVPGVNVVGMDALLFIIAASISASLHELFHARLAIRNGIPVKSFGIMLALIIPLAYVEVEEEE FRRTRILKRLGVLSAGVAVNLILATVSLVLLTLATSPIGMLVTDVEPGSPAYRYGIHAYDVITSINGSLVKSINDIPVVK MIAKPTSLNLTVWRRDTGYVNLVIPIGVNDEKIGIYLSSSPRIELLEYLGGLPAFLLYKFLLWMYTINLSLSILNAAPLF ITDGGRIINELAGNKYGNIINIIGVIILLLILLP
Specific function: Unknown
COG id: COG0750
COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI19922044, Length=145, Percent_Identity=30.3448275862069, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38967; Mature: 38967
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: PS50106 PDZ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILYIFIASLLAFWVVVNLFYRYFLAGKYSSIEIHGYVVLVIKRKTEGRASPSGEARLL CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECCCCCCCCCCHHHHH HNIVLTILYFVSLTLFFYMVAISILNRLYIGSTGVVVLVPGVNVVGMDALLFIIAASISA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH SLHELFHARLAIRNGIPVKSFGIMLALIIPLAYVEVEEEEFRRTRILKRLGVLSAGVAVN HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHH LILATVSLVLLTLATSPIGMLVTDVEPGSPAYRYGIHAYDVITSINGSLVKSINDIPVVK HHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHCCHHHHHHHHCCCHHHHHCCCCCHHH MIAKPTSLNLTVWRRDTGYVNLVIPIGVNDEKIGIYLSSSPRIELLEYLGGLPAFLLYKF EEECCCCCEEEEEEECCCEEEEEEEECCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHH LLWMYTINLSLSILNAAPLFITDGGRIINELAGNKYGNIINIIGVIILLLILLP HHHHHHHHHEEEEECCCCEEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MNILYIFIASLLAFWVVVNLFYRYFLAGKYSSIEIHGYVVLVIKRKTEGRASPSGEARLL CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECCCCCCCCCCHHHHH HNIVLTILYFVSLTLFFYMVAISILNRLYIGSTGVVVLVPGVNVVGMDALLFIIAASISA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH SLHELFHARLAIRNGIPVKSFGIMLALIIPLAYVEVEEEEFRRTRILKRLGVLSAGVAVN HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHH LILATVSLVLLTLATSPIGMLVTDVEPGSPAYRYGIHAYDVITSINGSLVKSINDIPVVK HHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHCCHHHHHHHHCCCHHHHHCCCCCHHH MIAKPTSLNLTVWRRDTGYVNLVIPIGVNDEKIGIYLSSSPRIELLEYLGGLPAFLLYKF EEECCCCCEEEEEEECCCEEEEEEEECCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHH LLWMYTINLSLSILNAAPLFITDGGRIINELAGNKYGNIINIIGVIILLLILLP HHHHHHHHHEEEEECCCCEEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA