| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
Click here to switch to the map view.
The map label for this gene is vorA [H]
Identifier: 218884498
GI number: 218884498
Start: 1106739
End: 1107920
Strand: Direct
Name: vorA [H]
Synonym: DKAM_1187
Alternate gene names: 218884498
Gene position: 1106739-1107920 (Clockwise)
Preceding gene: 218884497
Following gene: 218884499
Centisome position: 81.07
GC content: 47.8
Gene sequence:
>1182_bases GTGGGCATGAAGAAGGCTTTAACAGGTAACTACGCCGTATCATACGCGGTGAAACTGGCAAGACCGGACGTAATAGCTGC CTATCCGATAACACCTCAGACAAGCATAGTTGAGAAACTCTCGGAAATGATAGAGAACGGTGAATTGGATTCGGTGATGA TCAGGGTTGAATCAGAGCATTCAGCACTAGCTGCATGCTTCGGTGCAGCCGTGGCCGGCGCCAGAGTATTCACCGCAACA AGCAGCCAGGGGCTCCTCTACATGCATGAGGTAGTACACTGGGCCTCCAGGGCCAGGATACCTATGGTTATGGCTATAGT ATCCAGGACAATTAATGCCCCATGGAATATATGGCCCGACCACAGCGACTTCATGGATCAACGCGACGCAGGCTGGGTAA TGAGTTACGCCATGGATAACCAGGAGGCATTAGACCTAGTGCTACAGGCCTTCAAGATCAGTGAGGACCCCTCGGTATAC CTCCCAGTCATGGTTGGGCTTGAAGGCTTCATACTAGGACACACTACAATGCCTGTCGACATACCTGATGAATCAATGGT TAGAGAGTGGCTTGGTCCCCGTAGACAGGGGTACATTATCGATGGAAGCACCCCACTTGCAGTAGGCGGGCTGACAATGC CTGAGGACACGGAGTATATTTTCTATGGAATACAGGAGGCAATGAATGAGGCGAAGAAAGTGATCAAGGAGGTTACTAAT GAGTACAATAAGCTATTTGGAAGAAAATATAGTGGACTTATAGAATGTTTCCACTGCAGTGATGCAAAATACATTACTAT ATCAATAGGTGCCTGGAGTGGTGATCTCATGGAGGCAGTGGAAAAGCTACGTAATGAAGGATACCCCATCGGATCAATAC GTATAAGATACTACCGTCCATTCCCAATGGAAGACATATGGGAGGTAATTAGAAGCAGTAAAGGAGTGCTTGTATACGAT AGATCAATAAGCTTCGGCTCATATGGCCCAATATTCACGGATCTAGCAGGTGGATTACTAACCTACACAAGGAATCCCCC CTATGTATCCAACATCGTGGCAGGAATCGCCGGCGTCAATGTTACAGCCGAGGACTTCTACAAGCTTACAAAGGAGTTCA TAGACGAGGTTGAAAAGAATGGCCAACCACCCGGCTTTAAATGGGTGATGATCAGGAGGTGA
Upstream 100 bases:
>100_bases ACCGGTGTAAAAATAGACTATGACTACTGCAAGGGATGTGGGGTATGCGCCGACGTATGCCCCGTTAACGCGATAAGCAT GGTTGAGGAGGTGAAGTAGT
Downstream 100 bases:
>100_bases TATATGTGTCTACAGGTAGACCCAAGCCCCCTATACCATATAATATGAGGGACATGGTATTACCGGGAGACGCCGCCTGC CCTGGATGCCCTATACCGAT
Product: Pyruvate:ferredoxin oxidoreductase subunit alpha-like protein
Products: NA
Alternate protein names: VOR; 2-oxoisovalerate ferredoxin reductase subunit alpha; 2-oxoisovalerate oxidoreductase alpha chain [H]
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MGMKKALTGNYAVSYAVKLARPDVIAAYPITPQTSIVEKLSEMIENGELDSVMIRVESEHSALAACFGAAVAGARVFTAT SSQGLLYMHEVVHWASRARIPMVMAIVSRTINAPWNIWPDHSDFMDQRDAGWVMSYAMDNQEALDLVLQAFKISEDPSVY LPVMVGLEGFILGHTTMPVDIPDESMVREWLGPRRQGYIIDGSTPLAVGGLTMPEDTEYIFYGIQEAMNEAKKVIKEVTN EYNKLFGRKYSGLIECFHCSDAKYITISIGAWSGDLMEAVEKLRNEGYPIGSIRIRYYRPFPMEDIWEVIRSSKGVLVYD RSISFGSYGPIFTDLAGGLLTYTRNPPYVSNIVAGIAGVNVTAEDFYKLTKEFIDEVEKNGQPPGFKWVMIRR
Sequences:
>Translated_393_residues MGMKKALTGNYAVSYAVKLARPDVIAAYPITPQTSIVEKLSEMIENGELDSVMIRVESEHSALAACFGAAVAGARVFTAT SSQGLLYMHEVVHWASRARIPMVMAIVSRTINAPWNIWPDHSDFMDQRDAGWVMSYAMDNQEALDLVLQAFKISEDPSVY LPVMVGLEGFILGHTTMPVDIPDESMVREWLGPRRQGYIIDGSTPLAVGGLTMPEDTEYIFYGIQEAMNEAKKVIKEVTN EYNKLFGRKYSGLIECFHCSDAKYITISIGAWSGDLMEAVEKLRNEGYPIGSIRIRYYRPFPMEDIWEVIRSSKGVLVYD RSISFGSYGPIFTDLAGGLLTYTRNPPYVSNIVAGIAGVNVTAEDFYKLTKEFIDEVEKNGQPPGFKWVMIRR >Mature_392_residues GMKKALTGNYAVSYAVKLARPDVIAAYPITPQTSIVEKLSEMIENGELDSVMIRVESEHSALAACFGAAVAGARVFTATS SQGLLYMHEVVHWASRARIPMVMAIVSRTINAPWNIWPDHSDFMDQRDAGWVMSYAMDNQEALDLVLQAFKISEDPSVYL PVMVGLEGFILGHTTMPVDIPDESMVREWLGPRRQGYIIDGSTPLAVGGLTMPEDTEYIFYGIQEAMNEAKKVIKEVTNE YNKLFGRKYSGLIECFHCSDAKYITISIGAWSGDLMEAVEKLRNEGYPIGSIRIRYYRPFPMEDIWEVIRSSKGVLVYDR SISFGSYGPIFTDLAGGLLTYTRNPPYVSNIVAGIAGVNVTAEDFYKLTKEFIDEVEKNGQPPGFKWVMIRR
Specific function: Oxidoreductase Required For The Transfer Of Electrons From Pyruvate To Flavodoxin (Potential). [C]
COG id: COG0674
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787642, Length=354, Percent_Identity=27.4011299435028, Blast_Score=103, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002880 - InterPro: IPR009014 - InterPro: IPR015941 [H]
Pfam domain/function: PF01855 POR_N [H]
EC number: =1.2.7.7 [H]
Molecular weight: Translated: 43930; Mature: 43799
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMKKALTGNYAVSYAVKLARPDVIAAYPITPQTSIVEKLSEMIENGELDSVMIRVESEH CCCCCCCCCCEEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECCH SALAACFGAAVAGARVFTATSSQGLLYMHEVVHWASRARIPMVMAIVSRTINAPWNIWPD HHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCC HSDFMDQRDAGWVMSYAMDNQEALDLVLQAFKISEDPSVYLPVMVGLEGFILGHTTMPVD CHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEHEECCCEEEEECEECCCC IPDESMVREWLGPRRQGYIIDGSTPLAVGGLTMPEDTEYIFYGIQEAMNEAKKVIKEVTN CCCHHHHHHHCCCCCCEEEEECCCCEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH EYNKLFGRKYSGLIECFHCSDAKYITISIGAWSGDLMEAVEKLRNEGYPIGSIRIRYYRP HHHHHHCCHHHHHEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECC FPMEDIWEVIRSSKGVLVYDRSISFGSYGPIFTDLAGGLLTYTRNPPYVSNIVAGIAGVN CCHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHCCCEEEECCCCCHHHHHHHHHHCCC VTAEDFYKLTKEFIDEVEKNGQPPGFKWVMIRR CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC >Mature Secondary Structure GMKKALTGNYAVSYAVKLARPDVIAAYPITPQTSIVEKLSEMIENGELDSVMIRVESEH CCCCCCCCCEEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECCH SALAACFGAAVAGARVFTATSSQGLLYMHEVVHWASRARIPMVMAIVSRTINAPWNIWPD HHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCC HSDFMDQRDAGWVMSYAMDNQEALDLVLQAFKISEDPSVYLPVMVGLEGFILGHTTMPVD CHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEHEECCCEEEEECEECCCC IPDESMVREWLGPRRQGYIIDGSTPLAVGGLTMPEDTEYIFYGIQEAMNEAKKVIKEVTN CCCHHHHHHHCCCCCCEEEEECCCCEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH EYNKLFGRKYSGLIECFHCSDAKYITISIGAWSGDLMEAVEKLRNEGYPIGSIRIRYYRP HHHHHHCCHHHHHEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECC FPMEDIWEVIRSSKGVLVYDRSISFGSYGPIFTDLAGGLLTYTRNPPYVSNIVAGIAGVN CCHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHCCCEEEECCCCCHHHHHHHHHHCCC VTAEDFYKLTKEFIDEVEKNGQPPGFKWVMIRR CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12622808 [H]