Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

Click here to switch to the map view.

The map label for this gene is vorA [H]

Identifier: 218884498

GI number: 218884498

Start: 1106739

End: 1107920

Strand: Direct

Name: vorA [H]

Synonym: DKAM_1187

Alternate gene names: 218884498

Gene position: 1106739-1107920 (Clockwise)

Preceding gene: 218884497

Following gene: 218884499

Centisome position: 81.07

GC content: 47.8

Gene sequence:

>1182_bases
GTGGGCATGAAGAAGGCTTTAACAGGTAACTACGCCGTATCATACGCGGTGAAACTGGCAAGACCGGACGTAATAGCTGC
CTATCCGATAACACCTCAGACAAGCATAGTTGAGAAACTCTCGGAAATGATAGAGAACGGTGAATTGGATTCGGTGATGA
TCAGGGTTGAATCAGAGCATTCAGCACTAGCTGCATGCTTCGGTGCAGCCGTGGCCGGCGCCAGAGTATTCACCGCAACA
AGCAGCCAGGGGCTCCTCTACATGCATGAGGTAGTACACTGGGCCTCCAGGGCCAGGATACCTATGGTTATGGCTATAGT
ATCCAGGACAATTAATGCCCCATGGAATATATGGCCCGACCACAGCGACTTCATGGATCAACGCGACGCAGGCTGGGTAA
TGAGTTACGCCATGGATAACCAGGAGGCATTAGACCTAGTGCTACAGGCCTTCAAGATCAGTGAGGACCCCTCGGTATAC
CTCCCAGTCATGGTTGGGCTTGAAGGCTTCATACTAGGACACACTACAATGCCTGTCGACATACCTGATGAATCAATGGT
TAGAGAGTGGCTTGGTCCCCGTAGACAGGGGTACATTATCGATGGAAGCACCCCACTTGCAGTAGGCGGGCTGACAATGC
CTGAGGACACGGAGTATATTTTCTATGGAATACAGGAGGCAATGAATGAGGCGAAGAAAGTGATCAAGGAGGTTACTAAT
GAGTACAATAAGCTATTTGGAAGAAAATATAGTGGACTTATAGAATGTTTCCACTGCAGTGATGCAAAATACATTACTAT
ATCAATAGGTGCCTGGAGTGGTGATCTCATGGAGGCAGTGGAAAAGCTACGTAATGAAGGATACCCCATCGGATCAATAC
GTATAAGATACTACCGTCCATTCCCAATGGAAGACATATGGGAGGTAATTAGAAGCAGTAAAGGAGTGCTTGTATACGAT
AGATCAATAAGCTTCGGCTCATATGGCCCAATATTCACGGATCTAGCAGGTGGATTACTAACCTACACAAGGAATCCCCC
CTATGTATCCAACATCGTGGCAGGAATCGCCGGCGTCAATGTTACAGCCGAGGACTTCTACAAGCTTACAAAGGAGTTCA
TAGACGAGGTTGAAAAGAATGGCCAACCACCCGGCTTTAAATGGGTGATGATCAGGAGGTGA

Upstream 100 bases:

>100_bases
ACCGGTGTAAAAATAGACTATGACTACTGCAAGGGATGTGGGGTATGCGCCGACGTATGCCCCGTTAACGCGATAAGCAT
GGTTGAGGAGGTGAAGTAGT

Downstream 100 bases:

>100_bases
TATATGTGTCTACAGGTAGACCCAAGCCCCCTATACCATATAATATGAGGGACATGGTATTACCGGGAGACGCCGCCTGC
CCTGGATGCCCTATACCGAT

Product: Pyruvate:ferredoxin oxidoreductase subunit alpha-like protein

Products: NA

Alternate protein names: VOR; 2-oxoisovalerate ferredoxin reductase subunit alpha; 2-oxoisovalerate oxidoreductase alpha chain [H]

Number of amino acids: Translated: 393; Mature: 392

Protein sequence:

>393_residues
MGMKKALTGNYAVSYAVKLARPDVIAAYPITPQTSIVEKLSEMIENGELDSVMIRVESEHSALAACFGAAVAGARVFTAT
SSQGLLYMHEVVHWASRARIPMVMAIVSRTINAPWNIWPDHSDFMDQRDAGWVMSYAMDNQEALDLVLQAFKISEDPSVY
LPVMVGLEGFILGHTTMPVDIPDESMVREWLGPRRQGYIIDGSTPLAVGGLTMPEDTEYIFYGIQEAMNEAKKVIKEVTN
EYNKLFGRKYSGLIECFHCSDAKYITISIGAWSGDLMEAVEKLRNEGYPIGSIRIRYYRPFPMEDIWEVIRSSKGVLVYD
RSISFGSYGPIFTDLAGGLLTYTRNPPYVSNIVAGIAGVNVTAEDFYKLTKEFIDEVEKNGQPPGFKWVMIRR

Sequences:

>Translated_393_residues
MGMKKALTGNYAVSYAVKLARPDVIAAYPITPQTSIVEKLSEMIENGELDSVMIRVESEHSALAACFGAAVAGARVFTAT
SSQGLLYMHEVVHWASRARIPMVMAIVSRTINAPWNIWPDHSDFMDQRDAGWVMSYAMDNQEALDLVLQAFKISEDPSVY
LPVMVGLEGFILGHTTMPVDIPDESMVREWLGPRRQGYIIDGSTPLAVGGLTMPEDTEYIFYGIQEAMNEAKKVIKEVTN
EYNKLFGRKYSGLIECFHCSDAKYITISIGAWSGDLMEAVEKLRNEGYPIGSIRIRYYRPFPMEDIWEVIRSSKGVLVYD
RSISFGSYGPIFTDLAGGLLTYTRNPPYVSNIVAGIAGVNVTAEDFYKLTKEFIDEVEKNGQPPGFKWVMIRR
>Mature_392_residues
GMKKALTGNYAVSYAVKLARPDVIAAYPITPQTSIVEKLSEMIENGELDSVMIRVESEHSALAACFGAAVAGARVFTATS
SQGLLYMHEVVHWASRARIPMVMAIVSRTINAPWNIWPDHSDFMDQRDAGWVMSYAMDNQEALDLVLQAFKISEDPSVYL
PVMVGLEGFILGHTTMPVDIPDESMVREWLGPRRQGYIIDGSTPLAVGGLTMPEDTEYIFYGIQEAMNEAKKVIKEVTNE
YNKLFGRKYSGLIECFHCSDAKYITISIGAWSGDLMEAVEKLRNEGYPIGSIRIRYYRPFPMEDIWEVIRSSKGVLVYDR
SISFGSYGPIFTDLAGGLLTYTRNPPYVSNIVAGIAGVNVTAEDFYKLTKEFIDEVEKNGQPPGFKWVMIRR

Specific function: Oxidoreductase Required For The Transfer Of Electrons From Pyruvate To Flavodoxin (Potential). [C]

COG id: COG0674

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787642, Length=354, Percent_Identity=27.4011299435028, Blast_Score=103, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002880
- InterPro:   IPR009014
- InterPro:   IPR015941 [H]

Pfam domain/function: PF01855 POR_N [H]

EC number: =1.2.7.7 [H]

Molecular weight: Translated: 43930; Mature: 43799

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMKKALTGNYAVSYAVKLARPDVIAAYPITPQTSIVEKLSEMIENGELDSVMIRVESEH
CCCCCCCCCCEEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECCH
SALAACFGAAVAGARVFTATSSQGLLYMHEVVHWASRARIPMVMAIVSRTINAPWNIWPD
HHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCC
HSDFMDQRDAGWVMSYAMDNQEALDLVLQAFKISEDPSVYLPVMVGLEGFILGHTTMPVD
CHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEHEECCCEEEEECEECCCC
IPDESMVREWLGPRRQGYIIDGSTPLAVGGLTMPEDTEYIFYGIQEAMNEAKKVIKEVTN
CCCHHHHHHHCCCCCCEEEEECCCCEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH
EYNKLFGRKYSGLIECFHCSDAKYITISIGAWSGDLMEAVEKLRNEGYPIGSIRIRYYRP
HHHHHHCCHHHHHEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECC
FPMEDIWEVIRSSKGVLVYDRSISFGSYGPIFTDLAGGLLTYTRNPPYVSNIVAGIAGVN
CCHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHCCCEEEECCCCCHHHHHHHHHHCCC
VTAEDFYKLTKEFIDEVEKNGQPPGFKWVMIRR
CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC
>Mature Secondary Structure 
GMKKALTGNYAVSYAVKLARPDVIAAYPITPQTSIVEKLSEMIENGELDSVMIRVESEH
CCCCCCCCCEEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECCH
SALAACFGAAVAGARVFTATSSQGLLYMHEVVHWASRARIPMVMAIVSRTINAPWNIWPD
HHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCC
HSDFMDQRDAGWVMSYAMDNQEALDLVLQAFKISEDPSVYLPVMVGLEGFILGHTTMPVD
CHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEHEECCCEEEEECEECCCC
IPDESMVREWLGPRRQGYIIDGSTPLAVGGLTMPEDTEYIFYGIQEAMNEAKKVIKEVTN
CCCHHHHHHHCCCCCCEEEEECCCCEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH
EYNKLFGRKYSGLIECFHCSDAKYITISIGAWSGDLMEAVEKLRNEGYPIGSIRIRYYRP
HHHHHHCCHHHHHEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECC
FPMEDIWEVIRSSKGVLVYDRSISFGSYGPIFTDLAGGLLTYTRNPPYVSNIVAGIAGVN
CCHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHCCCEEEECCCCCHHHHHHHHHHCCC
VTAEDFYKLTKEFIDEVEKNGQPPGFKWVMIRR
CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]