Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
---|---|
Accession | NC_011766 |
Length | 1,365,223 |
Click here to switch to the map view.
The map label for this gene is 218884321
Identifier: 218884321
GI number: 218884321
Start: 954983
End: 956152
Strand: Direct
Name: 218884321
Synonym: DKAM_1010
Alternate gene names: NA
Gene position: 954983-956152 (Clockwise)
Preceding gene: 218884319
Following gene: 218884326
Centisome position: 69.95
GC content: 49.15
Gene sequence:
>1170_bases ATGCACTCCTTGCTTTACCCGTTTAAATTTATAAGCGCCAGATTCTTTAAGTCTATTGGCGACCCCTTAGCTCCCCGAGA CCCATGGCTGGCCACGGGGAGGGAGCCGGGGAGGAACCGTGATAAACCACCCCACGAAGACCTAGAGCGTAGGTGGGAAA CGGTTGAGGGGGTGTCATGCTTGGAGGAGATGTATAGGGGCTGGGTTAACCAGATTAGAGAGGCCCTGCTTGAATGGGGG AGATACAGGGTTTCCGGGGTCTTCGACAAGATCGTGGTACTCGGTATGGGTGGTAGCGGTATAGTAGGGGATTTCCTAGC TACTCTTTCACAAACCAGTAGAGGCCTCCCCGTGTATACTTCTAAATCGCATCACGCGCCTGGCTTCATTGACTCAGAGA CACTGGTTTTATCAGTTAGTTACAGTGGTAATACTGTTGAAACAGTAAATGCAACTATCGAGGCGTTTAAGAAGACGGGG AATATAGTGGTGGTCTCCAGCGGGGGTCATCTAAGAGACTATGCTTTGAAGCATGGATTACCATATATTCCACTACCCAC GGGTCTTGCTCCAAGAGCCTCCCTGCCATCAATGCTCTTCAAGATCCTTGGATTACTTGACTCGAGCGGGTTATCCATGG TGGGTAAGAGGGATGCTGAGGAAACCTTGTCATTCATAAATAGTGTCATGGATAACGCGGTGGAAGAGGCTTACCGGCTA GCCGAGTGGATCCATGGAATCCAGGGTCTACTGGTTATTGCAACCCATACCCCTCTAGAAGCGCTGGCTCTAAGGGGTAA GAACGAGTTTAATGAGAACAGTAAGATACCGGTTAAAATAGATGTTGCACCTGAATGGATGCATAACGATATAGTAGGGT ATGAGGAGCCTAGTGGTATACCCTTAAAGATCATTGAAGTCTTCGACCCGGCTGACGAGGCTGGATGCAGGCTCGTGGAG TTCATGGATGAAATATACAAGGAGGTTAATGCCTGGAGGCATAGGTTGAGTCTTAGAGGGGAGACATTATTAGATAAGCT TATCTACGGTAGCCTAGTTCTCGGAGTGGCCAGCGTCAGGCTCGCGGTCCTCAGGGGTATAGATCCCCTTGAGACAAGGA GTATCAAGAGGTATAAGGAGTCTGTGCATAATATATTCCCCGGGCTTTAA
Upstream 100 bases:
>100_bases CTACCATCACGCTATAGTTATTTTATATCTCAACCCATTTAAAAGAAGAATAACTAGGTTGTATATCTGTTCCCAGTTTG AAGGTTTTACAGGATGCTTA
Downstream 100 bases:
>100_bases AGGTTAAAAAGCTCTAAGCACTATTAAACCTAGTATCTGAGGGGCCGTAGTCTAGCCTGGCTAGGATGCGGGGCTTGGGC CCCCGTGACCCGGGGTTCAA
Product: bifunctional phosphoglucose/phosphomannose isomerase
Products: NA
Alternate protein names: Glucose-6-phosphate isomerase; GPI; Mannose-6-phosphate isomerase; Phosphoglucose isomerase; PGI; Phosphomannose isomerase; PMI [H]
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MHSLLYPFKFISARFFKSIGDPLAPRDPWLATGREPGRNRDKPPHEDLERRWETVEGVSCLEEMYRGWVNQIREALLEWG RYRVSGVFDKIVVLGMGGSGIVGDFLATLSQTSRGLPVYTSKSHHAPGFIDSETLVLSVSYSGNTVETVNATIEAFKKTG NIVVVSSGGHLRDYALKHGLPYIPLPTGLAPRASLPSMLFKILGLLDSSGLSMVGKRDAEETLSFINSVMDNAVEEAYRL AEWIHGIQGLLVIATHTPLEALALRGKNEFNENSKIPVKIDVAPEWMHNDIVGYEEPSGIPLKIIEVFDPADEAGCRLVE FMDEIYKEVNAWRHRLSLRGETLLDKLIYGSLVLGVASVRLAVLRGIDPLETRSIKRYKESVHNIFPGL
Sequences:
>Translated_389_residues MHSLLYPFKFISARFFKSIGDPLAPRDPWLATGREPGRNRDKPPHEDLERRWETVEGVSCLEEMYRGWVNQIREALLEWG RYRVSGVFDKIVVLGMGGSGIVGDFLATLSQTSRGLPVYTSKSHHAPGFIDSETLVLSVSYSGNTVETVNATIEAFKKTG NIVVVSSGGHLRDYALKHGLPYIPLPTGLAPRASLPSMLFKILGLLDSSGLSMVGKRDAEETLSFINSVMDNAVEEAYRL AEWIHGIQGLLVIATHTPLEALALRGKNEFNENSKIPVKIDVAPEWMHNDIVGYEEPSGIPLKIIEVFDPADEAGCRLVE FMDEIYKEVNAWRHRLSLRGETLLDKLIYGSLVLGVASVRLAVLRGIDPLETRSIKRYKESVHNIFPGL >Mature_389_residues MHSLLYPFKFISARFFKSIGDPLAPRDPWLATGREPGRNRDKPPHEDLERRWETVEGVSCLEEMYRGWVNQIREALLEWG RYRVSGVFDKIVVLGMGGSGIVGDFLATLSQTSRGLPVYTSKSHHAPGFIDSETLVLSVSYSGNTVETVNATIEAFKKTG NIVVVSSGGHLRDYALKHGLPYIPLPTGLAPRASLPSMLFKILGLLDSSGLSMVGKRDAEETLSFINSVMDNAVEEAYRL AEWIHGIQGLLVIATHTPLEALALRGKNEFNENSKIPVKIDVAPEWMHNDIVGYEEPSGIPLKIIEVFDPADEAGCRLVE FMDEIYKEVNAWRHRLSLRGETLLDKLIYGSLVLGVASVRLAVLRGIDPLETRSIKRYKESVHNIFPGL
Specific function: Catalyzes the isomerization of both glucose 6-phosphate and epimeric mannose 6-phosphate at a similar catalytic efficiency [H]
COG id: COG0166
COG function: function code G; Glucose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SIS domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011857 - InterPro: IPR019490 - InterPro: IPR001347 [H]
Pfam domain/function: PF10432 bact-PGI_C; PF01380 SIS [H]
EC number: =5.3.1.9; =5.3.1.8 [H]
Molecular weight: Translated: 43265; Mature: 43265
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSLLYPFKFISARFFKSIGDPLAPRDPWLATGREPGRNRDKPPHEDLERRWETVEGVSC CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH LEEMYRGWVNQIREALLEWGRYRVSGVFDKIVVLGMGGSGIVGDFLATLSQTSRGLPVYT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHCCCCCEEE SKSHHAPGFIDSETLVLSVSYSGNTVETVNATIEAFKKTGNIVVVSSGGHLRDYALKHGL CCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHCCC PYIPLPTGLAPRASLPSMLFKILGLLDSSGLSMVGKRDAEETLSFINSVMDNAVEEAYRL CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHH AEWIHGIQGLLVIATHTPLEALALRGKNEFNENSKIPVKIDVAPEWMHNDIVGYEEPSGI HHHHHHHCCEEEEEECCCHHHHHHCCCCCCCCCCCCCEEEECCHHHHHCCCCCCCCCCCC PLKIIEVFDPADEAGCRLVEFMDEIYKEVNAWRHRLSLRGETLLDKLIYGSLVLGVASVR CEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LAVLRGIDPLETRSIKRYKESVHNIFPGL HHHHHCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MHSLLYPFKFISARFFKSIGDPLAPRDPWLATGREPGRNRDKPPHEDLERRWETVEGVSC CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH LEEMYRGWVNQIREALLEWGRYRVSGVFDKIVVLGMGGSGIVGDFLATLSQTSRGLPVYT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHCCCCCEEE SKSHHAPGFIDSETLVLSVSYSGNTVETVNATIEAFKKTGNIVVVSSGGHLRDYALKHGL CCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHCCC PYIPLPTGLAPRASLPSMLFKILGLLDSSGLSMVGKRDAEETLSFINSVMDNAVEEAYRL CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHH AEWIHGIQGLLVIATHTPLEALALRGKNEFNENSKIPVKIDVAPEWMHNDIVGYEEPSGI HHHHHHHCCEEEEEECCCHHHHHHCCCCCCCCCCCCCEEEECCHHHHHCCCCCCCCCCCC PLKIIEVFDPADEAGCRLVEFMDEIYKEVNAWRHRLSLRGETLLDKLIYGSLVLGVASVR CEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LAVLRGIDPLETRSIKRYKESVHNIFPGL HHHHHCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11121031 [H]