Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884301

Identifier: 218884301

GI number: 218884301

Start: 937454

End: 937876

Strand: Direct

Name: 218884301

Synonym: DKAM_0990

Alternate gene names: NA

Gene position: 937454-937876 (Clockwise)

Preceding gene: 218884300

Following gene: 218884302

Centisome position: 68.67

GC content: 41.13

Gene sequence:

>423_bases
ATGAGCAATAACTATATTGAGAGATTTCTGAGTGAAGAGTTGAGGCTGGTTAATAAGCATGCCCCATATGAGAGAAAGAA
TTTATGCGAGCTCCTCAAGATGGAGATACCATACATAGTTCTTAGGGATGGAAGCCAACATGTATTGGATCCCCGTGAAT
TAAGAAGGCTACGCGATATCCTAGCTGATGACGCATGCAGTCTTCAACTACCTATAGTAATAGAGTATATACCCGGAGAA
AGGGAAGGTATATATGTCGTAAGGGATGAAATAGGGGCTAAAGCAATTGCTTCAGTAATGAATATAGGGAATCCTACTAC
TCCACTATTCCTCAGCCGCGCGCATATTTTAGAGCTAAGACGGATATTAAGAACCACCACAACAATACTCTTAAACCCCG
GCACATCAATTAACCTTGTTTAG

Upstream 100 bases:

>100_bases
AGTCCACTATAAAGATACTCCAGTTAAAGTTCGATGAAAGGGAGAGGGAAGAAAAGGCAAGATTGAAGAGGGTTAAAGCT
AGCCTTGAGAGGAGGGAGAA

Downstream 100 bases:

>100_bases
GGTGTTCAAGGATGTCATCTATTAAGGATGTTGATGAGTCAATAGATGCGATCATTAAGGAGGCTGAGAAAAAGAAGTTA
ATGATACTGAAGGAGGCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MSNNYIERFLSEELRLVNKHAPYERKNLCELLKMEIPYIVLRDGSQHVLDPRELRRLRDILADDACSLQLPIVIEYIPGE
REGIYVVRDEIGAKAIASVMNIGNPTTPLFLSRAHILELRRILRTTTTILLNPGTSINLV

Sequences:

>Translated_140_residues
MSNNYIERFLSEELRLVNKHAPYERKNLCELLKMEIPYIVLRDGSQHVLDPRELRRLRDILADDACSLQLPIVIEYIPGE
REGIYVVRDEIGAKAIASVMNIGNPTTPLFLSRAHILELRRILRTTTTILLNPGTSINLV
>Mature_139_residues
SNNYIERFLSEELRLVNKHAPYERKNLCELLKMEIPYIVLRDGSQHVLDPRELRRLRDILADDACSLQLPIVIEYIPGER
EGIYVVRDEIGAKAIASVMNIGNPTTPLFLSRAHILELRRILRTTTTILLNPGTSINLV

Specific function: Unknown

COG id: COG2083

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0216 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002746
- ProDom:   PD016056 [H]

Pfam domain/function: PF01886 DUF61 [H]

EC number: NA

Molecular weight: Translated: 16049; Mature: 15918

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNNYIERFLSEELRLVNKHAPYERKNLCELLKMEIPYIVLRDGSQHVLDPRELRRLRDI
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHH
LADDACSLQLPIVIEYIPGEREGIYVVRDEIGAKAIASVMNIGNPTTPLFLSRAHILELR
HCCCCCCEECCEEEEECCCCCCCEEEEHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHH
RILRTTTTILLNPGTSINLV
HHHHHHHEEEECCCCEEECC
>Mature Secondary Structure 
SNNYIERFLSEELRLVNKHAPYERKNLCELLKMEIPYIVLRDGSQHVLDPRELRRLRDI
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHH
LADDACSLQLPIVIEYIPGEREGIYVVRDEIGAKAIASVMNIGNPTTPLFLSRAHILELR
HCCCCCCEECCEEEEECCCCCCCEEEEHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHH
RILRTTTTILLNPGTSINLV
HHHHHHHEEEECCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA