Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884190

Identifier: 218884190

GI number: 218884190

Start: 841892

End: 842266

Strand: Reverse

Name: 218884190

Synonym: DKAM_0879

Alternate gene names: NA

Gene position: 842266-841892 (Counterclockwise)

Preceding gene: 218884191

Following gene: 218884188

Centisome position: 61.69

GC content: 44.0

Gene sequence:

>375_bases
TTGACTACAAGGGAGTTAACCTGTATAGTATGCCCCATTGGATGCACGCTAAGAGTAACAATCCTCGGAGATGGCAACAT
AAAGGTTGAGGGAGCTATGTGCAACAGGGGAGTAGAGTATGGTAAGCAGGAAGCAATCCAGCCTAAGAGGATAGTCATAA
CGGTTGTAAAAGTGAGAAACGGCGAGTTTCCAACAGTATCCGTTAAAACAAGTAAACCGGTGCCAAAAGAGTGCATATGG
AAAGTTATGAAGGCAACAGCTGACATCGAGGTGGAGGCTCCGGTGGAAATAGGTGATGTAATAATGAAGGATATATGCGG
AGCCGATCTAGTTGCCACAAGGAGAGTTAGGAGAATTATTTCACAAAAGGATTAA

Upstream 100 bases:

>100_bases
TTACTAGTGTAAAGCCAGCTGAGATGCTTAGACTATGGATACCTGGGAGAATCCTCTCCAGGGTCGATACTAGAAGGATA
ACACTGGAGGTGAAGCCGGC

Downstream 100 bases:

>100_bases
CCGGGATCCTGGATTAAGGTTTTATCTCTAGGTAGTTTCTGATTCTAACAGGGTCATTCACTATGGCCTCATCAATTAAC
GAAGCTATTTCCCCATATAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MTTRELTCIVCPIGCTLRVTILGDGNIKVEGAMCNRGVEYGKQEAIQPKRIVITVVKVRNGEFPTVSVKTSKPVPKECIW
KVMKATADIEVEAPVEIGDVIMKDICGADLVATRRVRRIISQKD

Sequences:

>Translated_124_residues
MTTRELTCIVCPIGCTLRVTILGDGNIKVEGAMCNRGVEYGKQEAIQPKRIVITVVKVRNGEFPTVSVKTSKPVPKECIW
KVMKATADIEVEAPVEIGDVIMKDICGADLVATRRVRRIISQKD
>Mature_123_residues
TTRELTCIVCPIGCTLRVTILGDGNIKVEGAMCNRGVEYGKQEAIQPKRIVITVVKVRNGEFPTVSVKTSKPVPKECIWK
VMKATADIEVEAPVEIGDVIMKDICGADLVATRRVRRIISQKD

Specific function: Unknown

COG id: COG3862

COG function: function code S; Uncharacterized protein with conserved CXXC pairs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13641; Mature: 13510

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRELTCIVCPIGCTLRVTILGDGNIKVEGAMCNRGVEYGKQEAIQPKRIVITVVKVRN
CCCCCEEEEEECCCCEEEEEEEECCCEEEEEECCCCCCCCCHHHCCCCCEEEEEEEEECC
GEFPTVSVKTSKPVPKECIWKVMKATADIEVEAPVEIGDVIMKDICGADLVATRRVRRII
CCCCEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHH
SQKD
CCCC
>Mature Secondary Structure 
TTRELTCIVCPIGCTLRVTILGDGNIKVEGAMCNRGVEYGKQEAIQPKRIVITVVKVRN
CCCCEEEEEECCCCEEEEEEEECCCEEEEEECCCCCCCCCHHHCCCCCEEEEEEEEECC
GEFPTVSVKTSKPVPKECIWKVMKATADIEVEAPVEIGDVIMKDICGADLVATRRVRRII
CCCCEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHH
SQKD
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA