| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884190
Identifier: 218884190
GI number: 218884190
Start: 841892
End: 842266
Strand: Reverse
Name: 218884190
Synonym: DKAM_0879
Alternate gene names: NA
Gene position: 842266-841892 (Counterclockwise)
Preceding gene: 218884191
Following gene: 218884188
Centisome position: 61.69
GC content: 44.0
Gene sequence:
>375_bases TTGACTACAAGGGAGTTAACCTGTATAGTATGCCCCATTGGATGCACGCTAAGAGTAACAATCCTCGGAGATGGCAACAT AAAGGTTGAGGGAGCTATGTGCAACAGGGGAGTAGAGTATGGTAAGCAGGAAGCAATCCAGCCTAAGAGGATAGTCATAA CGGTTGTAAAAGTGAGAAACGGCGAGTTTCCAACAGTATCCGTTAAAACAAGTAAACCGGTGCCAAAAGAGTGCATATGG AAAGTTATGAAGGCAACAGCTGACATCGAGGTGGAGGCTCCGGTGGAAATAGGTGATGTAATAATGAAGGATATATGCGG AGCCGATCTAGTTGCCACAAGGAGAGTTAGGAGAATTATTTCACAAAAGGATTAA
Upstream 100 bases:
>100_bases TTACTAGTGTAAAGCCAGCTGAGATGCTTAGACTATGGATACCTGGGAGAATCCTCTCCAGGGTCGATACTAGAAGGATA ACACTGGAGGTGAAGCCGGC
Downstream 100 bases:
>100_bases CCGGGATCCTGGATTAAGGTTTTATCTCTAGGTAGTTTCTGATTCTAACAGGGTCATTCACTATGGCCTCATCAATTAAC GAAGCTATTTCCCCATATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MTTRELTCIVCPIGCTLRVTILGDGNIKVEGAMCNRGVEYGKQEAIQPKRIVITVVKVRNGEFPTVSVKTSKPVPKECIW KVMKATADIEVEAPVEIGDVIMKDICGADLVATRRVRRIISQKD
Sequences:
>Translated_124_residues MTTRELTCIVCPIGCTLRVTILGDGNIKVEGAMCNRGVEYGKQEAIQPKRIVITVVKVRNGEFPTVSVKTSKPVPKECIW KVMKATADIEVEAPVEIGDVIMKDICGADLVATRRVRRIISQKD >Mature_123_residues TTRELTCIVCPIGCTLRVTILGDGNIKVEGAMCNRGVEYGKQEAIQPKRIVITVVKVRNGEFPTVSVKTSKPVPKECIWK VMKATADIEVEAPVEIGDVIMKDICGADLVATRRVRRIISQKD
Specific function: Unknown
COG id: COG3862
COG function: function code S; Uncharacterized protein with conserved CXXC pairs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13641; Mature: 13510
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRELTCIVCPIGCTLRVTILGDGNIKVEGAMCNRGVEYGKQEAIQPKRIVITVVKVRN CCCCCEEEEEECCCCEEEEEEEECCCEEEEEECCCCCCCCCHHHCCCCCEEEEEEEEECC GEFPTVSVKTSKPVPKECIWKVMKATADIEVEAPVEIGDVIMKDICGADLVATRRVRRII CCCCEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHH SQKD CCCC >Mature Secondary Structure TTRELTCIVCPIGCTLRVTILGDGNIKVEGAMCNRGVEYGKQEAIQPKRIVITVVKVRN CCCCEEEEEECCCCEEEEEEEECCCEEEEEECCCCCCCCCHHHCCCCCEEEEEEEEECC GEFPTVSVKTSKPVPKECIWKVMKATADIEVEAPVEIGDVIMKDICGADLVATRRVRRII CCCCEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHH SQKD CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA