Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884187

Identifier: 218884187

GI number: 218884187

Start: 838793

End: 840157

Strand: Reverse

Name: 218884187

Synonym: DKAM_0876

Alternate gene names: NA

Gene position: 840157-838793 (Counterclockwise)

Preceding gene: 218884188

Following gene: 218884185

Centisome position: 61.54

GC content: 44.47

Gene sequence:

>1365_bases
ATGAGTCAGGGGAGAACAGGATTAGTAATTCTAGCCCTAGCAATTCTGGTGCTACTCTACTTCTCGGCGGGCTATCTACT
AGCATTCATTGTCGACGTATTGAAGAACAGCCCCATCATACCCGGGGTTGAAAGCTATGAAAAAGAGGCCTATATAGGGT
ATTTAAAGAGTATTCCACAGATTATTGGAACAGTGCTGTCTATTCTCTGGGGTATTCTGGCAGATACGATTGGTAGAAGA
AAAACAATGTCTCTAATGATAATGTTCATGTTTACAGGACTAGCCATCATACCTTTCGCAGTGAACTATGTGATGCTCCT
AACATCCTTCATCATATTCGGGATCGGGTACACTGGGATAGCTCCAATAGTATATGCTTTCATAGCTGATGTACTGCCAC
CAGAGAAGAGGGGTGCCGGCTATGCTGCATACTATGCATCCAGTGTCCTCGGCTTTATAGGAGCATATGTGTTCTACCTT
GCTGTGAAGCCGTGGCAGACTACTTACGGTGTTCTCGGTGCAATGGTGCTCCTCACAGGGCTCATGCTACTAGCCGTGTC
AAGAGGTGTTAGGATAGGGGGTGCTGAGAAAACCTCCGTGATAGAGTTCAAGCTAAGTGAAGCTGTTTCATCATTTAGAA
AACCTAGCGTTATAGCTATCTTAGTGATGATTGTTTTCTGGACTATCCCGTGGGGGATGCTGACCACGTTTGCGATAGAC
TACATAATGGTGAAATGGGGTGTGTCAAAGACCATTGCGTCACTAATATTAATAGTCTCGGTGGTATCGATAGCCATAGG
ACACATCGTAGGCGGGATCTTAAGTGACAAGGTGGCTAGGAAGAAGGGTCCAGCAGGCAGAGTCTTCATCTCTATACTAG
GCATAGGGATAGGCCTACCAGTGATGCTCTCCATGATAATATACCCGTATCCATGTGGTAATGTCGAATGGTCTATAGTG
ATACAGCCACTGCTCCTAGCAGCTTTTGGAATGATGTTCACGACTATAGCTTATCCTAATATAACAGTTGTCTTAAGCGA
TGTAGTCAGGGCTGAGCACCGCGGTACAGTGTTCTCAGTATACAACATACTCAACACACTTGGCTGGGCTATAGGGCCAC
TGCTATATCCTACACTAGCATACATCTACATGCCACCCGATATCAGAGCAAGCGACCTGCCTAGACTGATAACACTTTAT
GACCCAGAATCTATGAGGTACATCAATTCATGTATGAGTGAAATGGCGCCAGTGAGAAACGCTTACATGTACTCAGCTAC
AACCATAGTGTTATTGTGGATAATATCATTGTTAATATGGATTACGATCAAGATAACCTATGAAAAAGACCGTGTCTACA
ACTAG

Upstream 100 bases:

>100_bases
TAGAGTTATGGATAACTGATTCGATGCATGTGAGGAGCATTTTCACCAATCCTGGTGAATACCGTGAGAAAGTTATAGGC
TTCCTAGAGAGGTGTGGGTT

Downstream 100 bases:

>100_bases
CTAAGTATATCGCTCAGGGGCCAGCATGTAGAACACACGTAGATCACAAGAGAGTGGCCAGAGGATTACTGAAGTGCTTC
AAACACAGTAAAGAGTGTTC

Product: major facilitator superfamily protein

Products: NA

Alternate protein names: 4-Hydroxybenzoate Transporter; Facilitator Superfamily Permease

Number of amino acids: Translated: 454; Mature: 453

Protein sequence:

>454_residues
MSQGRTGLVILALAILVLLYFSAGYLLAFIVDVLKNSPIIPGVESYEKEAYIGYLKSIPQIIGTVLSILWGILADTIGRR
KTMSLMIMFMFTGLAIIPFAVNYVMLLTSFIIFGIGYTGIAPIVYAFIADVLPPEKRGAGYAAYYASSVLGFIGAYVFYL
AVKPWQTTYGVLGAMVLLTGLMLLAVSRGVRIGGAEKTSVIEFKLSEAVSSFRKPSVIAILVMIVFWTIPWGMLTTFAID
YIMVKWGVSKTIASLILIVSVVSIAIGHIVGGILSDKVARKKGPAGRVFISILGIGIGLPVMLSMIIYPYPCGNVEWSIV
IQPLLLAAFGMMFTTIAYPNITVVLSDVVRAEHRGTVFSVYNILNTLGWAIGPLLYPTLAYIYMPPDIRASDLPRLITLY
DPESMRYINSCMSEMAPVRNAYMYSATTIVLLWIISLLIWITIKITYEKDRVYN

Sequences:

>Translated_454_residues
MSQGRTGLVILALAILVLLYFSAGYLLAFIVDVLKNSPIIPGVESYEKEAYIGYLKSIPQIIGTVLSILWGILADTIGRR
KTMSLMIMFMFTGLAIIPFAVNYVMLLTSFIIFGIGYTGIAPIVYAFIADVLPPEKRGAGYAAYYASSVLGFIGAYVFYL
AVKPWQTTYGVLGAMVLLTGLMLLAVSRGVRIGGAEKTSVIEFKLSEAVSSFRKPSVIAILVMIVFWTIPWGMLTTFAID
YIMVKWGVSKTIASLILIVSVVSIAIGHIVGGILSDKVARKKGPAGRVFISILGIGIGLPVMLSMIIYPYPCGNVEWSIV
IQPLLLAAFGMMFTTIAYPNITVVLSDVVRAEHRGTVFSVYNILNTLGWAIGPLLYPTLAYIYMPPDIRASDLPRLITLY
DPESMRYINSCMSEMAPVRNAYMYSATTIVLLWIISLLIWITIKITYEKDRVYN
>Mature_453_residues
SQGRTGLVILALAILVLLYFSAGYLLAFIVDVLKNSPIIPGVESYEKEAYIGYLKSIPQIIGTVLSILWGILADTIGRRK
TMSLMIMFMFTGLAIIPFAVNYVMLLTSFIIFGIGYTGIAPIVYAFIADVLPPEKRGAGYAAYYASSVLGFIGAYVFYLA
VKPWQTTYGVLGAMVLLTGLMLLAVSRGVRIGGAEKTSVIEFKLSEAVSSFRKPSVIAILVMIVFWTIPWGMLTTFAIDY
IMVKWGVSKTIASLILIVSVVSIAIGHIVGGILSDKVARKKGPAGRVFISILGIGIGLPVMLSMIIYPYPCGNVEWSIVI
QPLLLAAFGMMFTTIAYPNITVVLSDVVRAEHRGTVFSVYNILNTLGWAIGPLLYPTLAYIYMPPDIRASDLPRLITLYD
PESMRYINSCMSEMAPVRNAYMYSATTIVLLWIISLLIWITIKITYEKDRVYN

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49921; Mature: 49790

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQGRTGLVILALAILVLLYFSAGYLLAFIVDVLKNSPIIPGVESYEKEAYIGYLKSIPQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
IIGTVLSILWGILADTIGRRKTMSLMIMFMFTGLAIIPFAVNYVMLLTSFIIFGIGYTGI
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
APIVYAFIADVLPPEKRGAGYAAYYASSVLGFIGAYVFYLAVKPWQTTYGVLGAMVLLTG
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LMLLAVSRGVRIGGAEKTSVIEFKLSEAVSSFRKPSVIAILVMIVFWTIPWGMLTTFAID
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHH
YIMVKWGVSKTIASLILIVSVVSIAIGHIVGGILSDKVARKKGPAGRVFISILGIGIGLP
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
VMLSMIIYPYPCGNVEWSIVIQPLLLAAFGMMFTTIAYPNITVVLSDVVRAEHRGTVFSV
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHH
YNILNTLGWAIGPLLYPTLAYIYMPPDIRASDLPRLITLYDPESMRYINSCMSEMAPVRN
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHH
AYMYSATTIVLLWIISLLIWITIKITYEKDRVYN
HHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCC
>Mature Secondary Structure 
SQGRTGLVILALAILVLLYFSAGYLLAFIVDVLKNSPIIPGVESYEKEAYIGYLKSIPQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH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HHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA