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The map label for this gene is 218884151

Identifier: 218884151

GI number: 218884151

Start: 809057

End: 809635

Strand: Reverse

Name: 218884151

Synonym: DKAM_0840

Alternate gene names: NA

Gene position: 809635-809057 (Counterclockwise)

Preceding gene: 218884154

Following gene: 218884150

Centisome position: 59.3

GC content: 45.42

Gene sequence:

>579_bases
GTGGAGGATGACTGGTGGTATCGTAGAAGGAGGAGGCCCTTCTGGAGCGAGGACCTCTTCGACGAAATAGACAAGATGTT
TGAAGACATGGAGAGAATGGTATTGGATTTAATGCGTAGATTCAGTAGAGGACTCACCCCTGAAGAATTCAGGGAGATAG
AGCGCCAGCTTGAAAGACAAGGTATAAGGCCGTATGTATACGGCTTCAGTATAACAATAGGCCCTGATGGAAAACCGGTG
GTCAGGGAATTCGGCAATATGAGGAGGGAGCGCGGTAAGCCTGTGATCACAGAGGAAAGGGAGCCATTAATAGATGTATT
TGAATCAGGCGATGAAGTCACGGTTATAGCTGAGATCCCCGGTGTAGAGAAAGATAAGATCGATGTAAAGGTATCCGATG
ACGGTAGAACACTTATCATCAACGCCAGTGATACGAACAGGAGGTATTATAAGGAGGTCGAACTACCGAGTAAAGTAGAT
CCATCCTCAGCTAAAGCCTCGTATAAGAATGGTGTTTTAGAAGTAAAACTCAAGAAAGCTGGTAAAGGGAAAGAGGGATT
CAAGATTAGTGTCGAGTAG

Upstream 100 bases:

>100_bases
GTGATCACCTAGGAAATAATATTATCCACTAGCGTGTTTAAAATATTATTAAAACTTAATATAGGCCGAATACACTATAT
TTTAGTAGTGGTGATACCCT

Downstream 100 bases:

>100_bases
TTTCACTTGTGGAACCATGAATAGTTTTTCACAGCGCTTTTAAACCGTGGTGTCCTCGATGATCATTGGTGTATTAAGCG
ATACACATGACAATATTCAT

Product: Small heat shock protein Hsp20

Products: NA

Alternate protein names: Small Heat Shock Protein; Heat Shock Protein; Hsp20/Alpha Crystallin Family Protein; Heat Shock Protein HSP; Hsp20-Type Molecular Chaperone; Molecular Chaperone; Small Heat Shock Protein Related Protein; Chaperonin Hsp; Hsp20-Type Chaperone; HSP20 Family Protein; Small Heat Shock Protein Hsp

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MEDDWWYRRRRRPFWSEDLFDEIDKMFEDMERMVLDLMRRFSRGLTPEEFREIERQLERQGIRPYVYGFSITIGPDGKPV
VREFGNMRRERGKPVITEEREPLIDVFESGDEVTVIAEIPGVEKDKIDVKVSDDGRTLIINASDTNRRYYKEVELPSKVD
PSSAKASYKNGVLEVKLKKAGKGKEGFKISVE

Sequences:

>Translated_192_residues
MEDDWWYRRRRRPFWSEDLFDEIDKMFEDMERMVLDLMRRFSRGLTPEEFREIERQLERQGIRPYVYGFSITIGPDGKPV
VREFGNMRRERGKPVITEEREPLIDVFESGDEVTVIAEIPGVEKDKIDVKVSDDGRTLIINASDTNRRYYKEVELPSKVD
PSSAKASYKNGVLEVKLKKAGKGKEGFKISVE
>Mature_192_residues
MEDDWWYRRRRRPFWSEDLFDEIDKMFEDMERMVLDLMRRFSRGLTPEEFREIERQLERQGIRPYVYGFSITIGPDGKPV
VREFGNMRRERGKPVITEEREPLIDVFESGDEVTVIAEIPGVEKDKIDVKVSDDGRTLIINASDTNRRYYKEVELPSKVD
PSSAKASYKNGVLEVKLKKAGKGKEGFKISVE

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22530; Mature: 22530

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDDWWYRRRRRPFWSEDLFDEIDKMFEDMERMVLDLMRRFSRGLTPEEFREIERQLERQ
CCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
GIRPYVYGFSITIGPDGKPVVREFGNMRRERGKPVITEEREPLIDVFESGDEVTVIAEIP
CCCEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCEEEEEECC
GVEKDKIDVKVSDDGRTLIINASDTNRRYYKEVELPSKVDPSSAKASYKNGVLEVKLKKA
CCCCCEEEEEECCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHCCEEEEEEECC
GKGKEGFKISVE
CCCCCCEEEEEC
>Mature Secondary Structure
MEDDWWYRRRRRPFWSEDLFDEIDKMFEDMERMVLDLMRRFSRGLTPEEFREIERQLERQ
CCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
GIRPYVYGFSITIGPDGKPVVREFGNMRRERGKPVITEEREPLIDVFESGDEVTVIAEIP
CCCEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCEEEEEECC
GVEKDKIDVKVSDDGRTLIINASDTNRRYYKEVELPSKVDPSSAKASYKNGVLEVKLKKA
CCCCCEEEEEECCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHCCEEEEEEECC
GKGKEGFKISVE
CCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA