| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884144
Identifier: 218884144
GI number: 218884144
Start: 803388
End: 804377
Strand: Reverse
Name: 218884144
Synonym: DKAM_0833
Alternate gene names: NA
Gene position: 804377-803388 (Counterclockwise)
Preceding gene: 218884146
Following gene: 218884143
Centisome position: 58.92
GC content: 47.78
Gene sequence:
>990_bases ATGCCAGTGTCCAGGGTATTGTTAATAGCTGGCTACGGCGGACACAGCGGCTTCGCCTATGCTATTGGGTATTACCTGGT TAAGAAAGGCGTGGAGCTGGATATCCTTGTGCCCAAGGGTTATGACTGGGTTAAAGAGAAGTTAGGGGGGCTTGGGGAGG TATACGAGGTCACATTACCAAGGAGACCAGCCGAGCCTCTTTACAAGGGGATAGCGAGGTGGTTTCAGGCTTTCGGTGAG TCAGTAAAATTATGTAGGAATAATAAATATCCAGTGGTGTTTGCATCAGGCTCGAATTTTTCTATACCTCCATCACTAGT CTGCTGGTTGAAGGATTCAAGGATCTTAACGATTGAGGATGTAGCAAGGTTCACTAGGAGGTCCAGGGCTACAAACATTC TCTATAGGCTGGGTGCAGAGGTATTCCTCCACTGGGATGAACAACTACAGCTGTATAGGAGGGGTATAGTAGCTGGGCCA GTATACGAGCCTGCAATATATGAATCAAGGGATGAAGGCTACATATTAGTCACCACAGGGACCTTCGGACATAAAGCACT CTTCGACATGTTGGATAGGCTGGAACCAGGTAGGAAAATAGTCCTGCAAACAGGTGATGTGGATCCGGAGCCGTATAAGA GGAGGCATCCAGAGTGGATAGTATTCCAGTATACTAGCGATATACATAAGTGGATAGCTGGGGCAAGCCTAGTGATCACT CATTATCCAGGCACAACAGCCTTAACAGCCCGGCTCTCATATAGTAAACCCGTTATAATGGTTTATTCCCCTAGACACAA GCTCGCAGCACCCAGGAGGGACTCCCTCACCCTAGCTAGGAAACTAGGCGTTATATACCTGGATAGCATTGAACCCGTGA GCCTAGAGGAAGCCATCAGGGAAGCACCGTTATTAAAGCTGCCGAAATACCGTAATGGCGGCGAATACATTGCAGAATAT ATTATGAGAATACTCCGGGGTGCAGGGTAA
Upstream 100 bases:
>100_bases ACCTGCCCGGCATCTACCCTAAAATCCAATCAATTTAATTAATGGTTTCAATTATATATTTATCCTGCTCCAACACTACT AGAGCTACAGCTATAAGGGG
Downstream 100 bases:
>100_bases TGAAGAATTATTTCTCAACGCTCCTAAATGATCCAGAGATAAAGTCCTCTCTAAGAATCTCGTTACCACTGGTATTCGTG GAGCTGGTGAATAGTCTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyltransferase Family; Oligosaccharide Biosynthesis Like Protein Protein; Oligosaccharide Biosynthesis Like Protein; Glycosyltransferase
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MPVSRVLLIAGYGGHSGFAYAIGYYLVKKGVELDILVPKGYDWVKEKLGGLGEVYEVTLPRRPAEPLYKGIARWFQAFGE SVKLCRNNKYPVVFASGSNFSIPPSLVCWLKDSRILTIEDVARFTRRSRATNILYRLGAEVFLHWDEQLQLYRRGIVAGP VYEPAIYESRDEGYILVTTGTFGHKALFDMLDRLEPGRKIVLQTGDVDPEPYKRRHPEWIVFQYTSDIHKWIAGASLVIT HYPGTTALTARLSYSKPVIMVYSPRHKLAAPRRDSLTLARKLGVIYLDSIEPVSLEEAIREAPLLKLPKYRNGGEYIAEY IMRILRGAG
Sequences:
>Translated_329_residues MPVSRVLLIAGYGGHSGFAYAIGYYLVKKGVELDILVPKGYDWVKEKLGGLGEVYEVTLPRRPAEPLYKGIARWFQAFGE SVKLCRNNKYPVVFASGSNFSIPPSLVCWLKDSRILTIEDVARFTRRSRATNILYRLGAEVFLHWDEQLQLYRRGIVAGP VYEPAIYESRDEGYILVTTGTFGHKALFDMLDRLEPGRKIVLQTGDVDPEPYKRRHPEWIVFQYTSDIHKWIAGASLVIT HYPGTTALTARLSYSKPVIMVYSPRHKLAAPRRDSLTLARKLGVIYLDSIEPVSLEEAIREAPLLKLPKYRNGGEYIAEY IMRILRGAG >Mature_328_residues PVSRVLLIAGYGGHSGFAYAIGYYLVKKGVELDILVPKGYDWVKEKLGGLGEVYEVTLPRRPAEPLYKGIARWFQAFGES VKLCRNNKYPVVFASGSNFSIPPSLVCWLKDSRILTIEDVARFTRRSRATNILYRLGAEVFLHWDEQLQLYRRGIVAGPV YEPAIYESRDEGYILVTTGTFGHKALFDMLDRLEPGRKIVLQTGDVDPEPYKRRHPEWIVFQYTSDIHKWIAGASLVITH YPGTTALTARLSYSKPVIMVYSPRHKLAAPRRDSLTLARKLGVIYLDSIEPVSLEEAIREAPLLKLPKYRNGGEYIAEYI MRILRGAG
Specific function: Unknown
COG id: COG0707
COG function: function code M; UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37312; Mature: 37181
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVSRVLLIAGYGGHSGFAYAIGYYLVKKGVELDILVPKGYDWVKEKLGGLGEVYEVTLP CCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCCEEEEECC RRPAEPLYKGIARWFQAFGESVKLCRNNKYPVVFASGSNFSIPPSLVCWLKDSRILTIED CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHEEEEECCCEEEEHHH VARFTRRSRATNILYRLGAEVFLHWDEQLQLYRRGIVAGPVYEPAIYESRDEGYILVTTG HHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEC TFGHKALFDMLDRLEPGRKIVLQTGDVDPEPYKRRHPEWIVFQYTSDIHKWIAGASLVIT CCCHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHCCCCEEEEEEHHHHHHHHCCCEEEEE HYPGTTALTARLSYSKPVIMVYSPRHKLAAPRRDSLTLARKLGVIYLDSIEPVSLEEAIR ECCCCEEEEEEEECCCCEEEEECCCHHHCCCCCCHHHHHHHCCEEEECCCCCCCHHHHHH EAPLLKLPKYRNGGEYIAEYIMRILRGAG HCCCEECCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure PVSRVLLIAGYGGHSGFAYAIGYYLVKKGVELDILVPKGYDWVKEKLGGLGEVYEVTLP CCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCCEEEEECC RRPAEPLYKGIARWFQAFGESVKLCRNNKYPVVFASGSNFSIPPSLVCWLKDSRILTIED CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHEEEEECCCEEEEHHH VARFTRRSRATNILYRLGAEVFLHWDEQLQLYRRGIVAGPVYEPAIYESRDEGYILVTTG HHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEC TFGHKALFDMLDRLEPGRKIVLQTGDVDPEPYKRRHPEWIVFQYTSDIHKWIAGASLVIT CCCHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHCCCCEEEEEEHHHHHHHHCCCEEEEE HYPGTTALTARLSYSKPVIMVYSPRHKLAAPRRDSLTLARKLGVIYLDSIEPVSLEEAIR ECCCCEEEEEEEECCCCEEEEECCCHHHCCCCCCHHHHHHHCCEEEECCCCCCCHHHHHH EAPLLKLPKYRNGGEYIAEYIMRILRGAG HCCCEECCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA