Click here to switch to the map view.

The map label for this gene is glgC [H]

Identifier: 218884142

GI number: 218884142

Start: 801253

End: 801990

Strand: Reverse

Name: glgC [H]

Synonym: DKAM_0831

Alternate gene names: 218884142

Gene position: 801990-801253 (Counterclockwise)

Preceding gene: 218884143

Following gene: 218884139

Centisome position: 58.74

GC content: 44.72

Gene sequence:

>738_bases
TTGTCTGCAACTATTACCTCACTTATACTGGCAGGGGGTCAGGGTGAGAGGTTCCGCCCCTATACCGATATAATTCCTAA
GCCAATGATACCTGTTGGGAGCAATGAGAAACCGGTACTAGAGTTGATCGTGAAATGGCTTAGGAAACACGGCGTAGAGG
ATATAGTGTTCTTAGTTAACTATAAGTGGAGATATATCTATAACTATTTCGAAGACGGCTCCCGCTTCAGAGTCAGGATA
AGGTACTCCATTGACGAGGCAAACGGCTACACAAATACAGGGGGCTCAATACTGAAGGCTCATAGAGAGGGCTTGGTAAA
TGGGAGGACGCTTATATGGTATGGGGATATACTGGCTCCACTGGACATTCACGACCTACTTAAATACCATGCCGAATCAA
AGAGCGATGTAACACTAGTTGTAACCAGTAGATATCGTGTCCCTGTTGGAGTGGTGAGGATGGATAGCGATAATAATATT
GTAGAGATGAGGGAGAAGCCTGAACTCGATATAAATGCCACAATAGGCATCGCCGTTATAGAGCCATATATCTTGGAGCT
GAAGCTAGAGGATGAGCTGGGCAAGGACTTTGACTTCATGGGGGATCTCGTGCCATGGCTTATTAACAATGGATACCGGG
TCAAGGCATACATATATAATGGAGAATGGTTTGACGTGGGAAGCCTTGAGAGATATAAAAAACTGGATATGGAGTGGATT
ACACGGGTATTTGGCTAA

Upstream 100 bases:

>100_bases
ATTCAAACGCTATTTCAACCAGCTGGCCAGAAGACTTATTAGCTAACCTGGAGATAACCGAATAATAGTTAATATAATAG
TTAATTAGTGGCGGATCCCT

Downstream 100 bases:

>100_bases
GAGCCGAATGCCCTATCTCCAGCGTCCCCGAGACCGGGGACTATGTATCCTTTTTCATTCACCTCTGGGTCAACCGCGAT
AGTGTATAGTTTTAAGTCCA

Product: putative sugar-phosphate nucleotidyl transferase

Products: NA

Alternate protein names: ADP-glucose pyrophosphorylase; ADPGlc PPase; ADP-glucose synthase [H]

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MSATITSLILAGGQGERFRPYTDIIPKPMIPVGSNEKPVLELIVKWLRKHGVEDIVFLVNYKWRYIYNYFEDGSRFRVRI
RYSIDEANGYTNTGGSILKAHREGLVNGRTLIWYGDILAPLDIHDLLKYHAESKSDVTLVVTSRYRVPVGVVRMDSDNNI
VEMREKPELDINATIGIAVIEPYILELKLEDELGKDFDFMGDLVPWLINNGYRVKAYIYNGEWFDVGSLERYKKLDMEWI
TRVFG

Sequences:

>Translated_245_residues
MSATITSLILAGGQGERFRPYTDIIPKPMIPVGSNEKPVLELIVKWLRKHGVEDIVFLVNYKWRYIYNYFEDGSRFRVRI
RYSIDEANGYTNTGGSILKAHREGLVNGRTLIWYGDILAPLDIHDLLKYHAESKSDVTLVVTSRYRVPVGVVRMDSDNNI
VEMREKPELDINATIGIAVIEPYILELKLEDELGKDFDFMGDLVPWLINNGYRVKAYIYNGEWFDVGSLERYKKLDMEWI
TRVFG
>Mature_244_residues
SATITSLILAGGQGERFRPYTDIIPKPMIPVGSNEKPVLELIVKWLRKHGVEDIVFLVNYKWRYIYNYFEDGSRFRVRIR
YSIDEANGYTNTGGSILKAHREGLVNGRTLIWYGDILAPLDIHDLLKYHAESKSDVTLVVTSRYRVPVGVVRMDSDNNIV
EMREKPELDINATIGIAVIEPYILELKLEDELGKDFDFMGDLVPWLINNGYRVKAYIYNGEWFDVGSLERYKKLDMEWIT
RVFG

Specific function: Catalyzes The Formation Of Dtdp-Glucose, From Dttp And Glucose 1-Phosphate, As Well As Its Pyrophosphorolysis. [C]

COG id: COG1208

COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family [H]

Homologues:

Organism=Caenorhabditis elegans, GI133931050, Length=238, Percent_Identity=25.2100840336134, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005836
- InterPro:   IPR011831
- InterPro:   IPR023049
- InterPro:   IPR005835
- InterPro:   IPR011004 [H]

Pfam domain/function: PF00483 NTP_transferase [H]

EC number: =2.7.7.27 [H]

Molecular weight: Translated: 28332; Mature: 28201

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATITSLILAGGQGERFRPYTDIIPKPMIPVGSNEKPVLELIVKWLRKHGVEDIVFLVN
CCCCEEEHEEECCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEE
YKWRYIYNYFEDGSRFRVRIRYSIDEANGYTNTGGSILKAHREGLVNGRTLIWYGDILAP
CEEEEEEEECCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEECCEECC
LDIHDLLKYHAESKSDVTLVVTSRYRVPVGVVRMDSDNNIVEMREKPELDINATIGIAVI
CCHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEECCCCCEEEECCCCCCEEEEEEEEEEE
EPYILELKLEDELGKDFDFMGDLVPWLINNGYRVKAYIYNGEWFDVGSLERYKKLDMEWI
CCEEEEEEECHHCCCCHHHHHHHHHHHHCCCEEEEEEEECCCEEECCCHHHHHHCCHHHH
TRVFG
HHHCC
>Mature Secondary Structure 
SATITSLILAGGQGERFRPYTDIIPKPMIPVGSNEKPVLELIVKWLRKHGVEDIVFLVN
CCCEEEHEEECCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEE
YKWRYIYNYFEDGSRFRVRIRYSIDEANGYTNTGGSILKAHREGLVNGRTLIWYGDILAP
CEEEEEEEECCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEECCEECC
LDIHDLLKYHAESKSDVTLVVTSRYRVPVGVVRMDSDNNIVEMREKPELDINATIGIAVI
CCHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEECCCCCEEEECCCCCCEEEEEEEEEEE
EPYILELKLEDELGKDFDFMGDLVPWLINNGYRVKAYIYNGEWFDVGSLERYKKLDMEWI
CCEEEEEEECHHCCCCHHHHHHHHHHHHCCCEEEEEEEECCCEEECCCHHHHHHCCHHHH
TRVFG
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA