| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884107
Identifier: 218884107
GI number: 218884107
Start: 769875
End: 770294
Strand: Reverse
Name: 218884107
Synonym: DKAM_0796
Alternate gene names: NA
Gene position: 770294-769875 (Counterclockwise)
Preceding gene: 218884109
Following gene: 218884105
Centisome position: 56.42
GC content: 43.1
Gene sequence:
>420_bases ATGTATAGTATAAGGTATAGGGATGGATGCCTAGAAGTCAAACGGGCAGGCGAGTACCTCTTGTTAAGTGGCTGGAACTA CTCAATAGAGATACGTCCTCGAATCATAAGCGTCAAGGGGTTCAAGAGAGCCGAGGTCAAGGAAGTCTATGGCTCAAGAA GGAAAATAGTGTTCATCTACCATGATGCAGTGAAAGAACTCAGGGAATGCTATAATACAGTAGAGGAGATAGATCTAGGG GACCACCTGGTAAAAGCCACAAGCTTATTCACCGGGCACTACATAACCATAGTCACACCAGGCTACACACTCATAGACTA CATAGTTATCACCGGAGATCAAACACTCATAATCCTACAAGGAAAGAGAAACATATTCCTCGAAGAACACAGAGATACCC TCACCCTATATTTAAACTAA
Upstream 100 bases:
>100_bases ATGGTTCAACACCTGTTCACAATATATAAAGATCCTGGAAGCCATATTATATCTTAAACACTAGTGGTTCACTATAGATT ATACAAGGGGTTGCCTGGTG
Downstream 100 bases:
>100_bases GACAACACCATACAAACATCCAGCCACCCCCTCAGCACGGCTTAGCAGGTCCTGGACTCCCCCGTGCGAGGGGCGTGAGA ATAAATAGAGTAGGGGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MYSIRYRDGCLEVKRAGEYLLLSGWNYSIEIRPRIISVKGFKRAEVKEVYGSRRKIVFIYHDAVKELRECYNTVEEIDLG DHLVKATSLFTGHYITIVTPGYTLIDYIVITGDQTLIILQGKRNIFLEEHRDTLTLYLN
Sequences:
>Translated_139_residues MYSIRYRDGCLEVKRAGEYLLLSGWNYSIEIRPRIISVKGFKRAEVKEVYGSRRKIVFIYHDAVKELRECYNTVEEIDLG DHLVKATSLFTGHYITIVTPGYTLIDYIVITGDQTLIILQGKRNIFLEEHRDTLTLYLN >Mature_139_residues MYSIRYRDGCLEVKRAGEYLLLSGWNYSIEIRPRIISVKGFKRAEVKEVYGSRRKIVFIYHDAVKELRECYNTVEEIDLG DHLVKATSLFTGHYITIVTPGYTLIDYIVITGDQTLIILQGKRNIFLEEHRDTLTLYLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16238; Mature: 16238
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSIRYRDGCLEVKRAGEYLLLSGWNYSIEIRPRIISVKGFKRAEVKEVYGSRRKIVFIY CEEEEECCCCEEHCCCCCEEEEECCCEEEEEEEEEEEECCCCCHHHHHHHCCCEEEEEEE HDAVKELRECYNTVEEIDLGDHLVKATSLFTGHYITIVTPGYTLIDYIVITGDQTLIILQ HHHHHHHHHHHHHHHHCCCCCHHHHHEEEECCCEEEEEECCCCEEEEEEEECCCEEEEEE GKRNIFLEEHRDTLTLYLN CCCCEEEEECCCEEEEEEC >Mature Secondary Structure MYSIRYRDGCLEVKRAGEYLLLSGWNYSIEIRPRIISVKGFKRAEVKEVYGSRRKIVFIY CEEEEECCCCEEHCCCCCEEEEECCCEEEEEEEEEEEECCCCCHHHHHHHCCCEEEEEEE HDAVKELRECYNTVEEIDLGDHLVKATSLFTGHYITIVTPGYTLIDYIVITGDQTLIILQ HHHHHHHHHHHHHHHHCCCCCHHHHHEEEECCCEEEEEECCCCEEEEEEEECCCEEEEEE GKRNIFLEEHRDTLTLYLN CCCCEEEEECCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA