| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884097
Identifier: 218884097
GI number: 218884097
Start: 758207
End: 759076
Strand: Reverse
Name: 218884097
Synonym: DKAM_0786
Alternate gene names: NA
Gene position: 759076-758207 (Counterclockwise)
Preceding gene: 218884098
Following gene: 218884095
Centisome position: 55.6
GC content: 57.36
Gene sequence:
>870_bases ATGGGGCTGGAGGATCTGAACGAGCTTTACAGCGAGCTTAAGGAGAAATTGAAGTGTGGAGACCCATGTATTAAAGGACC GTTGACGTACTTCGAGAACTGGCCCTACTTAAACGTCGGAGAGCTATTTGTGCCGGTTGCGGAGAGCGTCCTCGAGAGTC TGCGCGACCTGCACTCGCTTCCCGAGGAGAAAAGGAGCGAGTACGTTAGACACATAACGCTGAGGAGAGTAGGCGTAGCC CTCGAGAGGAGGGACGCAGCTACACCCAAGGTAGTCAAGACGGGCTACTTCTACACGGCACCAGCCTCGCTTTACGTCCG TGAAGCAGGTGGAACGCCTGTTCAACCCGTCTTCAAGTACGTTCTAGAAGGATCAATTGACAGGTGCGGGGAAGTGGTGA GGTTCGGCGGCGAGGGCACGCTAGCCGAGGTCTACTGCGAGAACGGCGCGGATGATGTCTTCAAGTACGTTACGAGCCCG CTCGAGCAGCTGGATAGAGGCACTTACGTAGCTCTAACGCCGATACCCGCCATCCCCACCCCGTGCGGGCAGAGCGGTGG AGGTCTTGGGGGCGCTTTCAACGTTGAGAAAGTGGCCGGTGTCTGTTTCGAGACTCCTTTCAGGCTCGGCGAGATCGTCG GTCTACCCGGTAGTCTAAAGGACGGCGTAGTAGCAAAGCCGCCGAAGATCAGGGTTGAGAGGCTTGGGCTAGGCTACTCG GAATCTCTGAACATGAGGAGGCCGCAGATACTCGTCTTCCCGCAGGGCACCATAGTGCAAATCAAAGACGCCGCTCCGAG GAGCTTCAGCGACTTGGTGAGGGTGCTGCTGGAGATAGGGTTTGCGAGCCTGCTCAAGCTGCCTGGCTAG
Upstream 100 bases:
>100_bases CACGCCGATCCCGCTACCGACCACTGTTGCGGGAGCCTTGGGCGCCCTACTGGGTGTACGGCTCAAGGCCGGTTCCGCTA TAGACCCGTGCAGCAAGCTG
Downstream 100 bases:
>100_bases TATCAGACCTAGTACCGGGCGCACCTAGGCGGCTCCTCCATTTTTCCCCGGCCTGGGCCCGCGTTCTCCAGGCTTTTAAG GCCTGTGGAGAGCGCCTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MGLEDLNELYSELKEKLKCGDPCIKGPLTYFENWPYLNVGELFVPVAESVLESLRDLHSLPEEKRSEYVRHITLRRVGVA LERRDAATPKVVKTGYFYTAPASLYVREAGGTPVQPVFKYVLEGSIDRCGEVVRFGGEGTLAEVYCENGADDVFKYVTSP LEQLDRGTYVALTPIPAIPTPCGQSGGGLGGAFNVEKVAGVCFETPFRLGEIVGLPGSLKDGVVAKPPKIRVERLGLGYS ESLNMRRPQILVFPQGTIVQIKDAAPRSFSDLVRVLLEIGFASLLKLPG
Sequences:
>Translated_289_residues MGLEDLNELYSELKEKLKCGDPCIKGPLTYFENWPYLNVGELFVPVAESVLESLRDLHSLPEEKRSEYVRHITLRRVGVA LERRDAATPKVVKTGYFYTAPASLYVREAGGTPVQPVFKYVLEGSIDRCGEVVRFGGEGTLAEVYCENGADDVFKYVTSP LEQLDRGTYVALTPIPAIPTPCGQSGGGLGGAFNVEKVAGVCFETPFRLGEIVGLPGSLKDGVVAKPPKIRVERLGLGYS ESLNMRRPQILVFPQGTIVQIKDAAPRSFSDLVRVLLEIGFASLLKLPG >Mature_288_residues GLEDLNELYSELKEKLKCGDPCIKGPLTYFENWPYLNVGELFVPVAESVLESLRDLHSLPEEKRSEYVRHITLRRVGVAL ERRDAATPKVVKTGYFYTAPASLYVREAGGTPVQPVFKYVLEGSIDRCGEVVRFGGEGTLAEVYCENGADDVFKYVTSPL EQLDRGTYVALTPIPAIPTPCGQSGGGLGGAFNVEKVAGVCFETPFRLGEIVGLPGSLKDGVVAKPPKIRVERLGLGYSE SLNMRRPQILVFPQGTIVQIKDAAPRSFSDLVRVLLEIGFASLLKLPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31566; Mature: 31435
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLEDLNELYSELKEKLKCGDPCIKGPLTYFENWPYLNVGELFVPVAESVLESLRDLHSL CCHHHHHHHHHHHHHHHHCCCCHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHC PEEKRSEYVRHITLRRVGVALERRDAATPKVVKTGYFYTAPASLYVREAGGTPVQPVFKY CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCEEEECCCEEEEECCCCCCHHHHHHH VLEGSIDRCGEVVRFGGEGTLAEVYCENGADDVFKYVTSPLEQLDRGTYVALTPIPAIPT HHHCCHHHHHHHHEECCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC PCGQSGGGLGGAFNVEKVAGVCFETPFRLGEIVGLPGSLKDGVVAKPPKIRVERLGLGYS CCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCC ESLNMRRPQILVFPQGTIVQIKDAAPRSFSDLVRVLLEIGFASLLKLPG CCCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GLEDLNELYSELKEKLKCGDPCIKGPLTYFENWPYLNVGELFVPVAESVLESLRDLHSL CHHHHHHHHHHHHHHHHCCCCHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHC PEEKRSEYVRHITLRRVGVALERRDAATPKVVKTGYFYTAPASLYVREAGGTPVQPVFKY CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCEEEECCCEEEEECCCCCCHHHHHHH VLEGSIDRCGEVVRFGGEGTLAEVYCENGADDVFKYVTSPLEQLDRGTYVALTPIPAIPT HHHCCHHHHHHHHEECCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC PCGQSGGGLGGAFNVEKVAGVCFETPFRLGEIVGLPGSLKDGVVAKPPKIRVERLGLGYS CCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCC ESLNMRRPQILVFPQGTIVQIKDAAPRSFSDLVRVLLEIGFASLLKLPG CCCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA