| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884091
Identifier: 218884091
GI number: 218884091
Start: 748510
End: 749031
Strand: Reverse
Name: 218884091
Synonym: DKAM_0780
Alternate gene names: NA
Gene position: 749031-748510 (Counterclockwise)
Preceding gene: 218884092
Following gene: 218884090
Centisome position: 54.87
GC content: 48.47
Gene sequence:
>522_bases TTGATTCACATAAAGCCGTTCGACAGGGTTAGCCCATCCCTTGTCAAAGAATACTATTACTGCCCAGTTATACCCTGGAT ACAAGCCAATCTAATGGTGGCAGAGCCCATGACGGACAGCATGGCACTGGGTTCCGAAGCCATGAAACCACCCACCGGGA GAGGGCAGGTGAGAATCTCGACGAGTAGAGGAGTAACAATCATAGACGAGGTCATCGAAGAGAAAAACGGAAAGATTATT ATAGAGAAGAAGGCTTTCAAGAGCCACAACTTCTCGAGATACGTATCACAAGCGATAACCTCATACGTCATCGCGAGAGA GAAGCTGCCCGGCGTCAGGAAAGTTAGGATTGCCGCCGGGAGTAAAATAGTTGAGTTAGAAGTCAACGATCAATTGGTCC GCGATGTTGAAGCTTCTATTAGGAGTGTCGAGAGGATGATCAGCGAGAGTAGTCTACCTAAGCCCGGTGAACAGGGTAAA TGCTCTAGTTGCTGGTATAGGAGATTCTGCCCCTACGCCTAG
Upstream 100 bases:
>100_bases TACACGTTTTCCAACTATATGATACAGCTATCCAGCGCTTGAAGGTGTTCGGGAAGCCGCTAGCAGAGATCACGGTTGAG CATGGAGTGATGGTGATAAC
Downstream 100 bases:
>100_bases TATGGTCTGCAACGATCGGAGAACCTATGGTCAATGGATTTATTTAGGTCTTCCGACAAACATTCTCACGGGAGAGAAAA GTGAAGACGCTGGTTGCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MIHIKPFDRVSPSLVKEYYYCPVIPWIQANLMVAEPMTDSMALGSEAMKPPTGRGQVRISTSRGVTIIDEVIEEKNGKII IEKKAFKSHNFSRYVSQAITSYVIAREKLPGVRKVRIAAGSKIVELEVNDQLVRDVEASIRSVERMISESSLPKPGEQGK CSSCWYRRFCPYA
Sequences:
>Translated_173_residues MIHIKPFDRVSPSLVKEYYYCPVIPWIQANLMVAEPMTDSMALGSEAMKPPTGRGQVRISTSRGVTIIDEVIEEKNGKII IEKKAFKSHNFSRYVSQAITSYVIAREKLPGVRKVRIAAGSKIVELEVNDQLVRDVEASIRSVERMISESSLPKPGEQGK CSSCWYRRFCPYA >Mature_173_residues MIHIKPFDRVSPSLVKEYYYCPVIPWIQANLMVAEPMTDSMALGSEAMKPPTGRGQVRISTSRGVTIIDEVIEEKNGKII IEKKAFKSHNFSRYVSQAITSYVIAREKLPGVRKVRIAAGSKIVELEVNDQLVRDVEASIRSVERMISESSLPKPGEQGK CSSCWYRRFCPYA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19511; Mature: 19511
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHIKPFDRVSPSLVKEYYYCPVIPWIQANLMVAEPMTDSMALGSEAMKPPTGRGQVRIS CEECCCCHHCCHHHHHHHHCCCCCHHHCCCEEEECCCCCHHHHCCHHCCCCCCCCEEEEE TSRGVTIIDEVIEEKNGKIIIEKKAFKSHNFSRYVSQAITSYVIAREKLPGVRKVRIAAG CCCCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECC SKIVELEVNDQLVRDVEASIRSVERMISESSLPKPGEQGKCSSCWYRRFCPYA CEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure MIHIKPFDRVSPSLVKEYYYCPVIPWIQANLMVAEPMTDSMALGSEAMKPPTGRGQVRIS CEECCCCHHCCHHHHHHHHCCCCCHHHCCCEEEECCCCCHHHHCCHHCCCCCCCCEEEEE TSRGVTIIDEVIEEKNGKIIIEKKAFKSHNFSRYVSQAITSYVIAREKLPGVRKVRIAAG CCCCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECC SKIVELEVNDQLVRDVEASIRSVERMISESSLPKPGEQGKCSSCWYRRFCPYA CEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA