| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884082
Identifier: 218884082
GI number: 218884082
Start: 739383
End: 740039
Strand: Direct
Name: 218884082
Synonym: DKAM_0771
Alternate gene names: NA
Gene position: 739383-740039 (Clockwise)
Preceding gene: 218884081
Following gene: 218884096
Centisome position: 54.16
GC content: 48.4
Gene sequence:
>657_bases GTGAGGCATGTTTTAGTCTTGGCTGGGTTATTTCTCGTGTTTTCAATAGTCCTAGCCTCAGCTGCTATTCTAGCAGAGCT GGGCTATGGCCCGGGCGACTGGCTGAGGTACAGATATAGCATCTCAGCTGGAGGAGCTAAATGCGTATACATTATCAAAG TAACTGTTAGGGACGTCCAGGGCACTGTTGTCAAATATGATGCTGGGATCGAGAAGTTTGAGAGCGGTGATAGCACGCTG TGTTCTTCTCTTAGTGGTCTACTGGTTCTCGGATTAGCTTTCTCAAGCGCTACGTCTAAAGACGTTTCAAGCATGGGGCC TGAGAGTGGAGAGTTATTTATAAGCCCGCGGTACTCGGGTGACTACACTACTAGCAGCGGGTCCAGGGTCTCCTACAAGA ACGGTGTCTTGGTTAAGATGGAGACTGAGTCTACAACCGGCGTAGTCGCCACCATCAGCTTGGAATTAATTGATACTAGT ATAGGATGGCTTAAGCAGGAGATGGGACAAACCCCGTTCACACAGCAACTTCTAATAATTATAGCCATAGTAGCAATAGC CGCAATAGGGATAGCCGTATACTTTATTGCTAGAAGGAGAGCTGTAGAAACCCCGCCTTCACAGCCCCAGCAGCAGCCCA GTGTTCCAGGCAATTAA
Upstream 100 bases:
>100_bases GCAGAGGGGGAGGGCTAGGATGATAGCACTTGGTATAAAAGCCTTTCGTAAATTTTATATTTACACCTCAAAAAAACTCA TTATTTTGAGGTGTAATATT
Downstream 100 bases:
>100_bases AGAGACAGTCCTAATCCTGTCTTTCAGCTTTCCCCAACTCTTAGACAAAATTGTTTTCCGCACTTAAACAGACGCCGGAA ACATCATGGCATGCATTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MRHVLVLAGLFLVFSIVLASAAILAELGYGPGDWLRYRYSISAGGAKCVYIIKVTVRDVQGTVVKYDAGIEKFESGDSTL CSSLSGLLVLGLAFSSATSKDVSSMGPESGELFISPRYSGDYTTSSGSRVSYKNGVLVKMETESTTGVVATISLELIDTS IGWLKQEMGQTPFTQQLLIIIAIVAIAAIGIAVYFIARRRAVETPPSQPQQQPSVPGN
Sequences:
>Translated_218_residues MRHVLVLAGLFLVFSIVLASAAILAELGYGPGDWLRYRYSISAGGAKCVYIIKVTVRDVQGTVVKYDAGIEKFESGDSTL CSSLSGLLVLGLAFSSATSKDVSSMGPESGELFISPRYSGDYTTSSGSRVSYKNGVLVKMETESTTGVVATISLELIDTS IGWLKQEMGQTPFTQQLLIIIAIVAIAAIGIAVYFIARRRAVETPPSQPQQQPSVPGN >Mature_218_residues MRHVLVLAGLFLVFSIVLASAAILAELGYGPGDWLRYRYSISAGGAKCVYIIKVTVRDVQGTVVKYDAGIEKFESGDSTL CSSLSGLLVLGLAFSSATSKDVSSMGPESGELFISPRYSGDYTTSSGSRVSYKNGVLVKMETESTTGVVATISLELIDTS IGWLKQEMGQTPFTQQLLIIIAIVAIAAIGIAVYFIARRRAVETPPSQPQQQPSVPGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23193; Mature: 23193
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHVLVLAGLFLVFSIVLASAAILAELGYGPGDWLRYRYSISAGGAKCVYIIKVTVRDVQ CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEEEEEEECCC GTVVKYDAGIEKFESGDSTLCSSLSGLLVLGLAFSSATSKDVSSMGPESGELFISPRYSG CEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEEECCCCC DYTTSSGSRVSYKNGVLVKMETESTTGVVATISLELIDTSIGWLKQEMGQTPFTQQLLII CEECCCCCEEEECCCEEEEEECCCCCCEEEEEEEEEHHHHHHHHHHHHCCCCHHHHHHHH IAIVAIAAIGIAVYFIARRRAVETPPSQPQQQPSVPGN HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRHVLVLAGLFLVFSIVLASAAILAELGYGPGDWLRYRYSISAGGAKCVYIIKVTVRDVQ CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEEEEEEECCC GTVVKYDAGIEKFESGDSTLCSSLSGLLVLGLAFSSATSKDVSSMGPESGELFISPRYSG CEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEEECCCCC DYTTSSGSRVSYKNGVLVKMETESTTGVVATISLELIDTSIGWLKQEMGQTPFTQQLLII CEECCCCCEEEECCCEEEEEECCCCCCEEEEEEEEEHHHHHHHHHHHHCCCCHHHHHHHH IAIVAIAAIGIAVYFIARRRAVETPPSQPQQQPSVPGN HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA