| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884062
Identifier: 218884062
GI number: 218884062
Start: 722231
End: 722932
Strand: Direct
Name: 218884062
Synonym: DKAM_0751
Alternate gene names: NA
Gene position: 722231-722932 (Clockwise)
Preceding gene: 218884061
Following gene: 218884063
Centisome position: 52.9
GC content: 49.29
Gene sequence:
>702_bases TTGAAGACCAGGCTTATAGTTGAAACAGTGGTCTTCACCGTACTCGTTTACGCTGCAACAATAGTGCTTCAAATATACCA GCCTGCCACAGGCGGGTATTTCAACCTGGGCGAATCCATGATATATGTAGCGGCCCTCACATCGGGACCCATAGTTGCCG GGATAGCTGGGGGAGTAGGTGCCGCATTAGCTGATCTAACCACTGGCTACCAGATTTTCGCGCCGGGCACACTGATGATA AAGCTGTTGGAGGGGCTGGTAGCAGGGTATCTTGCCAGATTACTCAGGTCGAGACACCAGAAAATCATTGGTGGGTTACT GGGCGCAGTGTACGCCTCCGTGTTCACAGGGTTCGCGTTAGTGAAGTACTCGGGCATCGTGCAGGTCGGCCTAACAGGCT TCGAGGTAAATATACCATGGTATATCTGGCTACTCATAGGCATGCTCCTGGGTTTCACGTTAATCTACTCATTATTAATG AAGTATAGTAGTATGGGTGAAGCGCTGGCCCTATTAACTGGAGGCATGATAATGGTCACGGGCTACTTCATATACGAATA CTTTATCTCGAACCCCTACACGGGTAGGCCACCTATAGACGCCGTTATTGAGATACCTGTGAATATAGGGCAGGCTATTA CAGGTATAGTGGTGGCACTGCCGGTTGTCTCATGGCTTAGAAGAGCCGGGTATTTAAAGTAA
Upstream 100 bases:
>100_bases CGGGGATAACATTTATCAGTCCATCTAACCGGGAAGATGTATTGAACGTTCACGAACTCTTAAATAGGTTCAATAAAATA CCCGTGTAACGGTGATGTAA
Downstream 100 bases:
>100_bases GGTATTAATTAACACCTCGCCTAATTAACGCTTCCTAAATATTGAGTGAGCTGGAAATGATTGAGGCACATATAGAGGTA GCCGGCTATATAGATGGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MKTRLIVETVVFTVLVYAATIVLQIYQPATGGYFNLGESMIYVAALTSGPIVAGIAGGVGAALADLTTGYQIFAPGTLMI KLLEGLVAGYLARLLRSRHQKIIGGLLGAVYASVFTGFALVKYSGIVQVGLTGFEVNIPWYIWLLIGMLLGFTLIYSLLM KYSSMGEALALLTGGMIMVTGYFIYEYFISNPYTGRPPIDAVIEIPVNIGQAITGIVVALPVVSWLRRAGYLK
Sequences:
>Translated_233_residues MKTRLIVETVVFTVLVYAATIVLQIYQPATGGYFNLGESMIYVAALTSGPIVAGIAGGVGAALADLTTGYQIFAPGTLMI KLLEGLVAGYLARLLRSRHQKIIGGLLGAVYASVFTGFALVKYSGIVQVGLTGFEVNIPWYIWLLIGMLLGFTLIYSLLM KYSSMGEALALLTGGMIMVTGYFIYEYFISNPYTGRPPIDAVIEIPVNIGQAITGIVVALPVVSWLRRAGYLK >Mature_233_residues MKTRLIVETVVFTVLVYAATIVLQIYQPATGGYFNLGESMIYVAALTSGPIVAGIAGGVGAALADLTTGYQIFAPGTLMI KLLEGLVAGYLARLLRSRHQKIIGGLLGAVYASVFTGFALVKYSGIVQVGLTGFEVNIPWYIWLLIGMLLGFTLIYSLLM KYSSMGEALALLTGGMIMVTGYFIYEYFISNPYTGRPPIDAVIEIPVNIGQAITGIVVALPVVSWLRRAGYLK
Specific function: Unknown
COG id: COG4720
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25005; Mature: 25005
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTRLIVETVVFTVLVYAATIVLQIYQPATGGYFNLGESMIYVAALTSGPIVAGIAGGVG CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEEEEECCCCEEEHHHHHHH AALADLTTGYQIFAPGTLMIKLLEGLVAGYLARLLRSRHQKIIGGLLGAVYASVFTGFAL HHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKYSGIVQVGLTGFEVNIPWYIWLLIGMLLGFTLIYSLLMKYSSMGEALALLTGGMIMVT HHHHCCCEECCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH GYFIYEYFISNPYTGRPPIDAVIEIPVNIGQAITGIVVALPVVSWLRRAGYLK HHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKTRLIVETVVFTVLVYAATIVLQIYQPATGGYFNLGESMIYVAALTSGPIVAGIAGGVG CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEEEEECCCCEEEHHHHHHH AALADLTTGYQIFAPGTLMIKLLEGLVAGYLARLLRSRHQKIIGGLLGAVYASVFTGFAL HHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKYSGIVQVGLTGFEVNIPWYIWLLIGMLLGFTLIYSLLMKYSSMGEALALLTGGMIMVT HHHHCCCEECCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH GYFIYEYFISNPYTGRPPIDAVIEIPVNIGQAITGIVVALPVVSWLRRAGYLK HHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA