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The map label for this gene is tnpA1 [H]

Identifier: 218883992

GI number: 218883992

Start: 650283

End: 650639

Strand: Direct

Name: tnpA1 [H]

Synonym: DKAM_0681

Alternate gene names: 218883992

Gene position: 650283-650639 (Clockwise)

Preceding gene: 218883990

Following gene: 218883993

Centisome position: 47.63

GC content: 51.54

Gene sequence:

>357_bases
GTGTGGATACCTAAGTATAGGAGGGACATTCTCATTGGCGACGTCGCTGAATACACTAAAGAAGTCTTGAGAGGGATCAT
TACGGGTATTGGTTGCGAGCCTCTTGCCATCGAGGTCATGCCCGATCACGTCCACGTCCTCCTCCTATGCCCTCCGCGCC
TAGCCCCCTCCTACGTAGCGAACTACTTGAAGGGTAAGAGTGCTAGGCTGATACTGAAGAGGTTTCCGCAACTGAGAGCC
AGAGTTAAGTACGGGAAGCTGTGGTCTAGAAGTTACTTTGTCGCCACCGTGGGTAACGTGACGGCTGATATTGTGAAGAG
GTATGTTGAGGAGCAATGGTCTAAGGTGAGAGAGTGA

Upstream 100 bases:

>100_bases
CTTTAAAGTATTCTAGGGGCTAGGCGCGGTGGGTAACTCTCAGACATGGTTGAGACTTAGGAGTACTAGGCATGTTAAGT
ACTGGTGTGCCTACCACTTC

Downstream 100 bases:

>100_bases
AACGGTGTAGCGTGGTTGAGCTGGATCCAGACAGGGAGGCGTGGAATAAGCTTAAACTACTATGTAGCATATCCTCCAAG
CTTTGGAACGAGGTCAACTA

Product: IS element ISDka2 orfA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MWIPKYRRDILIGDVAEYTKEVLRGIITGIGCEPLAIEVMPDHVHVLLLCPPRLAPSYVANYLKGKSARLILKRFPQLRA
RVKYGKLWSRSYFVATVGNVTADIVKRYVEEQWSKVRE

Sequences:

>Translated_118_residues
MWIPKYRRDILIGDVAEYTKEVLRGIITGIGCEPLAIEVMPDHVHVLLLCPPRLAPSYVANYLKGKSARLILKRFPQLRA
RVKYGKLWSRSYFVATVGNVTADIVKRYVEEQWSKVRE
>Mature_118_residues
MWIPKYRRDILIGDVAEYTKEVLRGIITGIGCEPLAIEVMPDHVHVLLLCPPRLAPSYVANYLKGKSARLILKRFPQLRA
RVKYGKLWSRSYFVATVGNVTADIVKRYVEEQWSKVRE

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 17 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002686 [H]

Pfam domain/function: PF01797 Transposase_17 [H]

EC number: NA

Molecular weight: Translated: 13629; Mature: 13629

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWIPKYRRDILIGDVAEYTKEVLRGIITGIGCEPLAIEVMPDHVHVLLLCPPRLAPSYVA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEECCCCCHHHHH
NYLKGKSARLILKRFPQLRARVKYGKLWSRSYFVATVGNVTADIVKRYVEEQWSKVRE
HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MWIPKYRRDILIGDVAEYTKEVLRGIITGIGCEPLAIEVMPDHVHVLLLCPPRLAPSYVA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEECCCCCHHHHH
NYLKGKSARLILKRFPQLRARVKYGKLWSRSYFVATVGNVTADIVKRYVEEQWSKVRE
HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]