Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883963

Identifier: 218883963

GI number: 218883963

Start: 628705

End: 628983

Strand: Reverse

Name: 218883963

Synonym: DKAM_0652

Alternate gene names: NA

Gene position: 628983-628705 (Counterclockwise)

Preceding gene: 218883965

Following gene: 218883962

Centisome position: 46.07

GC content: 35.84

Gene sequence:

>279_bases
ATGGATAGGGTAGATAAAAGTATATACATTGATTTAAGAGCTAAAGAACTCGAGGACATGCTATTATATAGGTACCTCAG
GTTGCTCGAGGAATTAAAAATCCTGGAGTCCAGCATTGATTCAAGTGATTTAAGCGATGAAGACAAGAATAAGTTGAAGG
GTTTAATAGAAATACTTGGGGAAAGGATTCTCACGGAGCTCATGAATGCGAAAAATGAAAGAGAAAGAGTAGATGAGATA
CTATCTCAATCACATGTGCCAATTGAAGAAATTGAATAG

Upstream 100 bases:

>100_bases
CGCTCCTCAATTACTAGTTATACATTGAATATAGGTTCAGGTATTACTGTAGAGCTTAATTTAAAACCCTTTTATAGTGG
ATAGTCTTCTCGGGATTTCA

Downstream 100 bases:

>100_bases
TTTAAGCTTAAAAATCCTTAGTATTAATTGAAGACATAGCAAGCCTCTAGGTGTATGAAAAAGAGATGAATAGGGAAGAA
TGGGATATCAACGTAGCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MDRVDKSIYIDLRAKELEDMLLYRYLRLLEELKILESSIDSSDLSDEDKNKLKGLIEILGERILTELMNAKNERERVDEI
LSQSHVPIEEIE

Sequences:

>Translated_92_residues
MDRVDKSIYIDLRAKELEDMLLYRYLRLLEELKILESSIDSSDLSDEDKNKLKGLIEILGERILTELMNAKNERERVDEI
LSQSHVPIEEIE
>Mature_92_residues
MDRVDKSIYIDLRAKELEDMLLYRYLRLLEELKILESSIDSSDLSDEDKNKLKGLIEILGERILTELMNAKNERERVDEI
LSQSHVPIEEIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10863; Mature: 10863

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRVDKSIYIDLRAKELEDMLLYRYLRLLEELKILESSIDSSDLSDEDKNKLKGLIEILG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
ERILTELMNAKNERERVDEILSQSHVPIEEIE
HHHHHHHHCCCHHHHHHHHHHHHCCCCHHHCC
>Mature Secondary Structure
MDRVDKSIYIDLRAKELEDMLLYRYLRLLEELKILESSIDSSDLSDEDKNKLKGLIEILG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
ERILTELMNAKNERERVDEILSQSHVPIEEIE
HHHHHHHHCCCHHHHHHHHHHHHCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA