Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883955

Identifier: 218883955

GI number: 218883955

Start: 621261

End: 621554

Strand: Reverse

Name: 218883955

Synonym: DKAM_0644

Alternate gene names: NA

Gene position: 621554-621261 (Counterclockwise)

Preceding gene: 218883957

Following gene: 218883954

Centisome position: 45.53

GC content: 37.76

Gene sequence:

>294_bases
GTGAAGAAGGTGTTGAAGAGAATAGTGCTGGACGTATTATACCCGGTTAGAGGTGTGTCAATAATCGACTTGGCTAAATC
TATCATAGAGATAAGTGGTATTAACTCGGTTAGTATTACCGTTAAAGAAGTAGATGTGGATACGCAGAACATATTAGTTA
TAATAGAAGGCATCAACATAGACTATGATGATGTGAGGAAAATCATAGAGAAAGAGGGCGGTGTAATACATAGCATCGAT
CAGGTAGTTGCAGGGGAAAAAATAATAGAGCCTCCTGAATACCTATTAAAGTGA

Upstream 100 bases:

>100_bases
CATCGGGGCAGGGATGAACAGGGAGGACTCCCCTGGGCTTTTCACATGTTTAAAAATCTAGTAAGCTACTTAATTATCTA
GGTTGTAGGGTTCAAGCCTG

Downstream 100 bases:

>100_bases
GCAGTCTTGAATATAAACATCCTTGAAGTACTGGATAGCCTCTCGAGGCAGACATCAGTTATAATGGTTGGCTCGAAAAA
ATTAGTTGTCAAAGAATATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MKKVLKRIVLDVLYPVRGVSIIDLAKSIIEISGINSVSITVKEVDVDTQNILVIIEGINIDYDDVRKIIEKEGGVIHSID
QVVAGEKIIEPPEYLLK

Sequences:

>Translated_97_residues
MKKVLKRIVLDVLYPVRGVSIIDLAKSIIEISGINSVSITVKEVDVDTQNILVIIEGINIDYDDVRKIIEKEGGVIHSID
QVVAGEKIIEPPEYLLK
>Mature_97_residues
MKKVLKRIVLDVLYPVRGVSIIDLAKSIIEISGINSVSITVKEVDVDTQNILVIIEGINIDYDDVRKIIEKEGGVIHSID
QVVAGEKIIEPPEYLLK

Specific function: Unknown

COG id: COG1888

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003831
- InterPro:   IPR023129
- ProDom:   PD012512 [H]

Pfam domain/function: PF02680 DUF211 [H]

EC number: NA

Molecular weight: Translated: 10781; Mature: 10781

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVLKRIVLDVLYPVRGVSIIDLAKSIIEISGINSVSITVKEVDVDTQNILVIIEGINI
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEEECCCC
DYDDVRKIIEKEGGVIHSIDQVVAGEKIIEPPEYLLK
CHHHHHHHHHHCCCEEEHHHHHHCCCCCCCCHHHHCC
>Mature Secondary Structure
MKKVLKRIVLDVLYPVRGVSIIDLAKSIIEISGINSVSITVKEVDVDTQNILVIIEGINI
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEEECCCC
DYDDVRKIIEKEGGVIHSIDQVVAGEKIIEPPEYLLK
CHHHHHHHHHHCCCEEEHHHHHHCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]