Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
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Accession | NC_011766 |
Length | 1,365,223 |
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The map label for this gene is 218883955
Identifier: 218883955
GI number: 218883955
Start: 621261
End: 621554
Strand: Reverse
Name: 218883955
Synonym: DKAM_0644
Alternate gene names: NA
Gene position: 621554-621261 (Counterclockwise)
Preceding gene: 218883957
Following gene: 218883954
Centisome position: 45.53
GC content: 37.76
Gene sequence:
>294_bases GTGAAGAAGGTGTTGAAGAGAATAGTGCTGGACGTATTATACCCGGTTAGAGGTGTGTCAATAATCGACTTGGCTAAATC TATCATAGAGATAAGTGGTATTAACTCGGTTAGTATTACCGTTAAAGAAGTAGATGTGGATACGCAGAACATATTAGTTA TAATAGAAGGCATCAACATAGACTATGATGATGTGAGGAAAATCATAGAGAAAGAGGGCGGTGTAATACATAGCATCGAT CAGGTAGTTGCAGGGGAAAAAATAATAGAGCCTCCTGAATACCTATTAAAGTGA
Upstream 100 bases:
>100_bases CATCGGGGCAGGGATGAACAGGGAGGACTCCCCTGGGCTTTTCACATGTTTAAAAATCTAGTAAGCTACTTAATTATCTA GGTTGTAGGGTTCAAGCCTG
Downstream 100 bases:
>100_bases GCAGTCTTGAATATAAACATCCTTGAAGTACTGGATAGCCTCTCGAGGCAGACATCAGTTATAATGGTTGGCTCGAAAAA ATTAGTTGTCAAAGAATATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 97; Mature: 97
Protein sequence:
>97_residues MKKVLKRIVLDVLYPVRGVSIIDLAKSIIEISGINSVSITVKEVDVDTQNILVIIEGINIDYDDVRKIIEKEGGVIHSID QVVAGEKIIEPPEYLLK
Sequences:
>Translated_97_residues MKKVLKRIVLDVLYPVRGVSIIDLAKSIIEISGINSVSITVKEVDVDTQNILVIIEGINIDYDDVRKIIEKEGGVIHSID QVVAGEKIIEPPEYLLK >Mature_97_residues MKKVLKRIVLDVLYPVRGVSIIDLAKSIIEISGINSVSITVKEVDVDTQNILVIIEGINIDYDDVRKIIEKEGGVIHSID QVVAGEKIIEPPEYLLK
Specific function: Unknown
COG id: COG1888
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003831 - InterPro: IPR023129 - ProDom: PD012512 [H]
Pfam domain/function: PF02680 DUF211 [H]
EC number: NA
Molecular weight: Translated: 10781; Mature: 10781
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVLKRIVLDVLYPVRGVSIIDLAKSIIEISGINSVSITVKEVDVDTQNILVIIEGINI CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEEECCCC DYDDVRKIIEKEGGVIHSIDQVVAGEKIIEPPEYLLK CHHHHHHHHHHCCCEEEHHHHHHCCCCCCCCHHHHCC >Mature Secondary Structure MKKVLKRIVLDVLYPVRGVSIIDLAKSIIEISGINSVSITVKEVDVDTQNILVIIEGINI CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEEECCCC DYDDVRKIIEKEGGVIHSIDQVVAGEKIIEPPEYLLK CHHHHHHHHHHCCCEEEHHHHHHCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]