Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
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Accession | NC_011766 |
Length | 1,365,223 |
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The map label for this gene is 218883953
Identifier: 218883953
GI number: 218883953
Start: 619883
End: 620461
Strand: Reverse
Name: 218883953
Synonym: DKAM_0642
Alternate gene names: NA
Gene position: 620461-619883 (Counterclockwise)
Preceding gene: 218883954
Following gene: 218883947
Centisome position: 45.45
GC content: 42.83
Gene sequence:
>579_bases TTGGCCGGGGATACACATATACCTGATAGAGCCGAAAGAATTCATCCCTCTATTAAAAAACAATTAGAGTACAGGTCCCC CTTCGACTACTTGTTATTCACCGGTGATTTAACTTCAAGAGAGGTTATAGATTGGCTTAACAAACTGAGCGGGAGAGTAC TTATTGTAAGAGGTAACATGGATTACCTCCCTCTACCGAGAAACCGTATAGTGAATATAGATGCCTGGAAAACCGGGTTA ATTCACGGGGATGGAATTCATCCACGTGGTGATATAATGGGGTTAACCAGGGTCTCAATAGAGCTTGGCGTAGACATATT GGTTTCAGGTCACACTCACTCGCCATTCATTAAGACCGGTGTAAAGAGAAACATACTTCTCCTAAACCCAGGCTCCTTAA CCGGTGTATGGGGCGGTGGAGGAGGATCCTTTAAACCATCATACATTATTCTCGAGACCGAAGGCTTTGATCTACATATA GAGTTACATGTATTAGAGGGAGGCGGTTTAGTTATCGAAAAATACATGGCTAAGTTGAGTGACACGAGCTGGAATATTAC TCGGATGGAAGAACAATAA
Upstream 100 bases:
>100_bases GCTACTGTGAAGACTTTAAACAACATGTTTTCAGGGAGAAACATACTGGATGAATAAAAAGAGCCATTAGGCAGCGGGGT GAGGAGAGACGAGGATACTC
Downstream 100 bases:
>100_bases TGTTTCTCCACGGTAAAACCAGCTCTATCTCGCTACCAGCACTCACCTCAACAGTATTAGGCAGATATGCCAGCAGGGGC AGCTTCCCTATCTTAACCCT
Product: phosphodiesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MAGDTHIPDRAERIHPSIKKQLEYRSPFDYLLFTGDLTSREVIDWLNKLSGRVLIVRGNMDYLPLPRNRIVNIDAWKTGL IHGDGIHPRGDIMGLTRVSIELGVDILVSGHTHSPFIKTGVKRNILLLNPGSLTGVWGGGGGSFKPSYIILETEGFDLHI ELHVLEGGGLVIEKYMAKLSDTSWNITRMEEQ
Sequences:
>Translated_192_residues MAGDTHIPDRAERIHPSIKKQLEYRSPFDYLLFTGDLTSREVIDWLNKLSGRVLIVRGNMDYLPLPRNRIVNIDAWKTGL IHGDGIHPRGDIMGLTRVSIELGVDILVSGHTHSPFIKTGVKRNILLLNPGSLTGVWGGGGGSFKPSYIILETEGFDLHI ELHVLEGGGLVIEKYMAKLSDTSWNITRMEEQ >Mature_191_residues AGDTHIPDRAERIHPSIKKQLEYRSPFDYLLFTGDLTSREVIDWLNKLSGRVLIVRGNMDYLPLPRNRIVNIDAWKTGLI HGDGIHPRGDIMGLTRVSIELGVDILVSGHTHSPFIKTGVKRNILLLNPGSLTGVWGGGGGSFKPSYIILETEGFDLHIE LHVLEGGGLVIEKYMAKLSDTSWNITRMEEQ
Specific function: Unknown
COG id: COG0622
COG function: function code R; Predicted phosphoesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallophosphoesterase superfamily. YfcE family [H]
Homologues:
Organism=Homo sapiens, GI17402912, Length=173, Percent_Identity=33.5260115606936, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI7706441, Length=173, Percent_Identity=33.5260115606936, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI71997103, Length=187, Percent_Identity=32.0855614973262, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI71997096, Length=187, Percent_Identity=32.0855614973262, Blast_Score=89, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6321800, Length=155, Percent_Identity=29.6774193548387, Blast_Score=64, Evalue=1e-11, Organism=Drosophila melanogaster, GI19920498, Length=173, Percent_Identity=31.2138728323699, Blast_Score=93, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR020935 - InterPro: IPR000979 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 21423; Mature: 21292
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGDTHIPDRAERIHPSIKKQLEYRSPFDYLLFTGDLTSREVIDWLNKLSGRVLIVRGNM CCCCCCCCCHHHHCCHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEECCC DYLPLPRNRIVNIDAWKTGLIHGDGIHPRGDIMGLTRVSIELGVDILVSGHTHSPFIKTG CCCCCCCCCEEEEECCEEEEEECCCCCCCCCEEEEEEEEEEECEEEEEECCCCCCHHHCC VKRNILLLNPGSLTGVWGGGGGSFKPSYIILETEGFDLHIELHVLEGGGLVIEKYMAKLS CCCCEEEECCCCEEEEEECCCCCCCCCEEEEEECCCEEEEEEEEEECCCEEHHHHHHHHC DTSWNITRMEEQ CCCCEEEEECCC >Mature Secondary Structure AGDTHIPDRAERIHPSIKKQLEYRSPFDYLLFTGDLTSREVIDWLNKLSGRVLIVRGNM CCCCCCCCHHHHCCHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEECCC DYLPLPRNRIVNIDAWKTGLIHGDGIHPRGDIMGLTRVSIELGVDILVSGHTHSPFIKTG CCCCCCCCCEEEEECCEEEEEECCCCCCCCCEEEEEEEEEEECEEEEEECCCCCCHHHCC VKRNILLLNPGSLTGVWGGGGGSFKPSYIILETEGFDLHIELHVLEGGGLVIEKYMAKLS CCCCEEEECCCCEEEEEECCCCCCCCCEEEEEECCCEEEEEEEEEECCCEEHHHHHHHHC DTSWNITRMEEQ CCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]