| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883934
Identifier: 218883934
GI number: 218883934
Start: 591881
End: 593020
Strand: Direct
Name: 218883934
Synonym: DKAM_0623
Alternate gene names: NA
Gene position: 591881-593020 (Clockwise)
Preceding gene: 218883932
Following gene: 218883935
Centisome position: 43.35
GC content: 46.32
Gene sequence:
>1140_bases ATGAGAAAGACGATTGTGGTATTCATACTCCTAGGACTCATATCACTTTTCGCTGACATGACCTATGAGGGAGCGTTATC TATACGTGGAAGCTACCTGGAGATCATTGGTGCCCCCATTATAGTGGCAGGCTTAATTAATATAGGCTGGCTTGTCAGCT ATGGATCAAGGTTTCTGAGTGGTGTTTTAAGCGATTACCTTAGAAAGCCAATCATACTCTGGGTGCTTACTGTAACAGGG TATTTGATCAACGTTATCGTTGTACCGCTTCTAGCGCTTACCAATAGGTGGGAACTGGTGCTGGTACTTATTGTGTTAGA GCGGTTTGGGAAAGGCCTAAGGGCCCCTGCAAGAGACGTTATACTAGCTGAGGTAAGCGAGGGAATAGGTAAGGGGCTTG GATTCGGGGTTCATGAAACCATGGATCAAGCAGGGGCCGTATTAGGGCCGTTACTGGCATCACTGATCCTCGTGGCGAGT AATCAGGATTATCCCAGAGTATTTCTAATGCTTGGTGTTCCCGGGGTCATAGCTGTAGTGCTAGCTATTATTGCCTGGTC TATGTATCCACAGCCCAGTTCGCTTTCAACGAGAAAAAGTATGCTAGGCTTCAAGGGTTTAACGCGTAGCTACTACATGT ATACAGCTGGATTCTTCCTCTTCAGCCTAGGCTTTATATCGTGGGATATAATCAGCTACCACGCTAAAAATATAGGATTA AGGGGGGACTACATAGCCCTGCTCTATAGTATAGCTATGTTGGTAGACGGTTTGCTAGCCGTGCCCTCGGGGCTCCTTTA CGATAGAATAGGGATGAAAAGCACTATCCTAGCCCCACTGGCATCCATGGCTGCAGGCATAGCGTTCACGGTGTTTATTG ATAGAAACCCATTAATAATGGCGTTTACATGGGGTCTTACCATGGGAGTTTTCGAGACGAATATCAGGGTGGCTGTCTCA GACCTGGTACCGGCTGAAAAAAGGGCGTTTGCTTATGGGTTCTACGGCTTAGTAGAGGGGTTAGCAATGCTTGTTGGAGG TGTGATTCAGAGTATTCTAATAGCGGAGAACGCGATATTGCTCGCAGTATACATAGTTATCACAGAGTTCTCCAGCCTCA TAGTATTCTACAGGATATAG
Upstream 100 bases:
>100_bases CACCATGCCATAAATGGATAGTGGTGTCAAAGGCTTATTAATGTATTTTCAGCTCTATTAGTGTATTGTAACGATTATAA AATGTTATTGGGCGGTAGTG
Downstream 100 bases:
>100_bases ATAGGAAGAGTTAACATGATACATAGAGTTTTAAACAAACTATATGCTTTATTTCTAGTCTAGAATAGGCTTGGAACGGT GTCCAGGATTGAATGAAAGG
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MRKTIVVFILLGLISLFADMTYEGALSIRGSYLEIIGAPIIVAGLINIGWLVSYGSRFLSGVLSDYLRKPIILWVLTVTG YLINVIVVPLLALTNRWELVLVLIVLERFGKGLRAPARDVILAEVSEGIGKGLGFGVHETMDQAGAVLGPLLASLILVAS NQDYPRVFLMLGVPGVIAVVLAIIAWSMYPQPSSLSTRKSMLGFKGLTRSYYMYTAGFFLFSLGFISWDIISYHAKNIGL RGDYIALLYSIAMLVDGLLAVPSGLLYDRIGMKSTILAPLASMAAGIAFTVFIDRNPLIMAFTWGLTMGVFETNIRVAVS DLVPAEKRAFAYGFYGLVEGLAMLVGGVIQSILIAENAILLAVYIVITEFSSLIVFYRI
Sequences:
>Translated_379_residues MRKTIVVFILLGLISLFADMTYEGALSIRGSYLEIIGAPIIVAGLINIGWLVSYGSRFLSGVLSDYLRKPIILWVLTVTG YLINVIVVPLLALTNRWELVLVLIVLERFGKGLRAPARDVILAEVSEGIGKGLGFGVHETMDQAGAVLGPLLASLILVAS NQDYPRVFLMLGVPGVIAVVLAIIAWSMYPQPSSLSTRKSMLGFKGLTRSYYMYTAGFFLFSLGFISWDIISYHAKNIGL RGDYIALLYSIAMLVDGLLAVPSGLLYDRIGMKSTILAPLASMAAGIAFTVFIDRNPLIMAFTWGLTMGVFETNIRVAVS DLVPAEKRAFAYGFYGLVEGLAMLVGGVIQSILIAENAILLAVYIVITEFSSLIVFYRI >Mature_379_residues MRKTIVVFILLGLISLFADMTYEGALSIRGSYLEIIGAPIIVAGLINIGWLVSYGSRFLSGVLSDYLRKPIILWVLTVTG YLINVIVVPLLALTNRWELVLVLIVLERFGKGLRAPARDVILAEVSEGIGKGLGFGVHETMDQAGAVLGPLLASLILVAS NQDYPRVFLMLGVPGVIAVVLAIIAWSMYPQPSSLSTRKSMLGFKGLTRSYYMYTAGFFLFSLGFISWDIISYHAKNIGL RGDYIALLYSIAMLVDGLLAVPSGLLYDRIGMKSTILAPLASMAAGIAFTVFIDRNPLIMAFTWGLTMGVFETNIRVAVS DLVPAEKRAFAYGFYGLVEGLAMLVGGVIQSILIAENAILLAVYIVITEFSSLIVFYRI
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 41215; Mature: 41215
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKTIVVFILLGLISLFADMTYEGALSIRGSYLEIIGAPIIVAGLINIGWLVSYGSRFLS CCHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVLSDYLRKPIILWVLTVTGYLINVIVVPLLALTNRWELVLVLIVLERFGKGLRAPARDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHH ILAEVSEGIGKGLGFGVHETMDQAGAVLGPLLASLILVASNQDYPRVFLMLGVPGVIAVV HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHH LAIIAWSMYPQPSSLSTRKSMLGFKGLTRSYYMYTAGFFLFSLGFISWDIISYHAKNIGL HHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RGDYIALLYSIAMLVDGLLAVPSGLLYDRIGMKSTILAPLASMAAGIAFTVFIDRNPLIM CCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHCCEEEEEEECCCCEEE AFTWGLTMGVFETNIRVAVSDLVPAEKRAFAYGFYGLVEGLAMLVGGVIQSILIAENAIL EEECHHHHHHHHCCCEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LAVYIVITEFSSLIVFYRI HHHHHHHHHHHHHEEEEEC >Mature Secondary Structure MRKTIVVFILLGLISLFADMTYEGALSIRGSYLEIIGAPIIVAGLINIGWLVSYGSRFLS CCHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVLSDYLRKPIILWVLTVTGYLINVIVVPLLALTNRWELVLVLIVLERFGKGLRAPARDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHH ILAEVSEGIGKGLGFGVHETMDQAGAVLGPLLASLILVASNQDYPRVFLMLGVPGVIAVV HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHH LAIIAWSMYPQPSSLSTRKSMLGFKGLTRSYYMYTAGFFLFSLGFISWDIISYHAKNIGL HHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RGDYIALLYSIAMLVDGLLAVPSGLLYDRIGMKSTILAPLASMAAGIAFTVFIDRNPLIM CCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHCCEEEEEEECCCCEEE AFTWGLTMGVFETNIRVAVSDLVPAEKRAFAYGFYGLVEGLAMLVGGVIQSILIAENAIL EEECHHHHHHHHCCCEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LAVYIVITEFSSLIVFYRI HHHHHHHHHHHHHEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]