| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883877
Identifier: 218883877
GI number: 218883877
Start: 531291
End: 531869
Strand: Direct
Name: 218883877
Synonym: DKAM_0566
Alternate gene names: NA
Gene position: 531291-531869 (Clockwise)
Preceding gene: 218883876
Following gene: 218883881
Centisome position: 38.92
GC content: 54.92
Gene sequence:
>579_bases GTGAAGCCCATCGTTAGGCTGGCCTACGTCGGCGTGCCCATGCTCGTAGCGCTAATAATTTCGGCTCTTGCGCTCTCTGT TTCAAAGTGGGGGGCGCCCAGTCCGGGCAGAATCGACACAGCTGCCTTGCCCCTAGCTTTTGGGCTCGTTCTCGGCACCT TCGTCAACGACTCGATAGTGCTCTCCTTTGACTACCAAAGATTTTGCTGGTCGGTACGAGACGCCGTGCTAACCGCGTTT ATAAACTTCCTGGGGTTTTGGAGCTTTATCATAGTAGTCTCAGCCGTCCCAGCCGCTATCCTCGACAAAGACCTTTACGG CGTCTACGAGGTCCTCGGATTATCCACCTTAGCTCTAGCAACTCTCTTCTTGCTCGCGTGGACGTCTACAGATAACCAGC TATACCCGGCCTCGCTTTCGTGGACTATCGCCCTCAAGGCTATCGGCAATGCCGTGAGTAGGAGGAAGATCGTCATAGCC GCTGCCGCGCTGACTGCTGCGCTGTCCATAGTAAAGCTTCACACTTTTGTAATATGGTGGCTCTCTCTGCTGACAGCGGT GTACGGGACCCACCTCTAG
Upstream 100 bases:
>100_bases TCGCTGATGGAATAGTATACACGCCGGGATTGCCGGGTATCGCGTACTTTATGCTAGCAGTCTCCTCACCGCGCTCTTCT CAGTCACCGCATACCTCGGC
Downstream 100 bases:
>100_bases TCACGAGTCGGAACTCCGCTTCAAGGAAGGGATCTTTCTAGGATCTAGCATGCTCCAGGTCCGCCCCATAAAAGCCCGGC TTCAAGTGGGCCTGTTGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MKPIVRLAYVGVPMLVALIISALALSVSKWGAPSPGRIDTAALPLAFGLVLGTFVNDSIVLSFDYQRFCWSVRDAVLTAF INFLGFWSFIIVVSAVPAAILDKDLYGVYEVLGLSTLALATLFLLAWTSTDNQLYPASLSWTIALKAIGNAVSRRKIVIA AAALTAALSIVKLHTFVIWWLSLLTAVYGTHL
Sequences:
>Translated_192_residues MKPIVRLAYVGVPMLVALIISALALSVSKWGAPSPGRIDTAALPLAFGLVLGTFVNDSIVLSFDYQRFCWSVRDAVLTAF INFLGFWSFIIVVSAVPAAILDKDLYGVYEVLGLSTLALATLFLLAWTSTDNQLYPASLSWTIALKAIGNAVSRRKIVIA AAALTAALSIVKLHTFVIWWLSLLTAVYGTHL >Mature_192_residues MKPIVRLAYVGVPMLVALIISALALSVSKWGAPSPGRIDTAALPLAFGLVLGTFVNDSIVLSFDYQRFCWSVRDAVLTAF INFLGFWSFIIVVSAVPAAILDKDLYGVYEVLGLSTLALATLFLLAWTSTDNQLYPASLSWTIALKAIGNAVSRRKIVIA AAALTAALSIVKLHTFVIWWLSLLTAVYGTHL
Specific function: Unknown
COG id: COG1457
COG function: function code F; Purine-cytosine permease and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20730; Mature: 20730
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPIVRLAYVGVPMLVALIISALALSVSKWGAPSPGRIDTAALPLAFGLVLGTFVNDSIV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEE LSFDYQRFCWSVRDAVLTAFINFLGFWSFIIVVSAVPAAILDKDLYGVYEVLGLSTLALA EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLFLLAWTSTDNQLYPASLSWTIALKAIGNAVSRRKIVIAAAALTAALSIVKLHTFVIWW HHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSLLTAVYGTHL HHHHHHHHHCCC >Mature Secondary Structure MKPIVRLAYVGVPMLVALIISALALSVSKWGAPSPGRIDTAALPLAFGLVLGTFVNDSIV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEE LSFDYQRFCWSVRDAVLTAFINFLGFWSFIIVVSAVPAAILDKDLYGVYEVLGLSTLALA EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLFLLAWTSTDNQLYPASLSWTIALKAIGNAVSRRKIVIAAAALTAALSIVKLHTFVIWW HHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSLLTAVYGTHL HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA