Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

Click here to switch to the map view.

The map label for this gene is 218883877

Identifier: 218883877

GI number: 218883877

Start: 531291

End: 531869

Strand: Direct

Name: 218883877

Synonym: DKAM_0566

Alternate gene names: NA

Gene position: 531291-531869 (Clockwise)

Preceding gene: 218883876

Following gene: 218883881

Centisome position: 38.92

GC content: 54.92

Gene sequence:

>579_bases
GTGAAGCCCATCGTTAGGCTGGCCTACGTCGGCGTGCCCATGCTCGTAGCGCTAATAATTTCGGCTCTTGCGCTCTCTGT
TTCAAAGTGGGGGGCGCCCAGTCCGGGCAGAATCGACACAGCTGCCTTGCCCCTAGCTTTTGGGCTCGTTCTCGGCACCT
TCGTCAACGACTCGATAGTGCTCTCCTTTGACTACCAAAGATTTTGCTGGTCGGTACGAGACGCCGTGCTAACCGCGTTT
ATAAACTTCCTGGGGTTTTGGAGCTTTATCATAGTAGTCTCAGCCGTCCCAGCCGCTATCCTCGACAAAGACCTTTACGG
CGTCTACGAGGTCCTCGGATTATCCACCTTAGCTCTAGCAACTCTCTTCTTGCTCGCGTGGACGTCTACAGATAACCAGC
TATACCCGGCCTCGCTTTCGTGGACTATCGCCCTCAAGGCTATCGGCAATGCCGTGAGTAGGAGGAAGATCGTCATAGCC
GCTGCCGCGCTGACTGCTGCGCTGTCCATAGTAAAGCTTCACACTTTTGTAATATGGTGGCTCTCTCTGCTGACAGCGGT
GTACGGGACCCACCTCTAG

Upstream 100 bases:

>100_bases
TCGCTGATGGAATAGTATACACGCCGGGATTGCCGGGTATCGCGTACTTTATGCTAGCAGTCTCCTCACCGCGCTCTTCT
CAGTCACCGCATACCTCGGC

Downstream 100 bases:

>100_bases
TCACGAGTCGGAACTCCGCTTCAAGGAAGGGATCTTTCTAGGATCTAGCATGCTCCAGGTCCGCCCCATAAAAGCCCGGC
TTCAAGTGGGCCTGTTGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MKPIVRLAYVGVPMLVALIISALALSVSKWGAPSPGRIDTAALPLAFGLVLGTFVNDSIVLSFDYQRFCWSVRDAVLTAF
INFLGFWSFIIVVSAVPAAILDKDLYGVYEVLGLSTLALATLFLLAWTSTDNQLYPASLSWTIALKAIGNAVSRRKIVIA
AAALTAALSIVKLHTFVIWWLSLLTAVYGTHL

Sequences:

>Translated_192_residues
MKPIVRLAYVGVPMLVALIISALALSVSKWGAPSPGRIDTAALPLAFGLVLGTFVNDSIVLSFDYQRFCWSVRDAVLTAF
INFLGFWSFIIVVSAVPAAILDKDLYGVYEVLGLSTLALATLFLLAWTSTDNQLYPASLSWTIALKAIGNAVSRRKIVIA
AAALTAALSIVKLHTFVIWWLSLLTAVYGTHL
>Mature_192_residues
MKPIVRLAYVGVPMLVALIISALALSVSKWGAPSPGRIDTAALPLAFGLVLGTFVNDSIVLSFDYQRFCWSVRDAVLTAF
INFLGFWSFIIVVSAVPAAILDKDLYGVYEVLGLSTLALATLFLLAWTSTDNQLYPASLSWTIALKAIGNAVSRRKIVIA
AAALTAALSIVKLHTFVIWWLSLLTAVYGTHL

Specific function: Unknown

COG id: COG1457

COG function: function code F; Purine-cytosine permease and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20730; Mature: 20730

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPIVRLAYVGVPMLVALIISALALSVSKWGAPSPGRIDTAALPLAFGLVLGTFVNDSIV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEE
LSFDYQRFCWSVRDAVLTAFINFLGFWSFIIVVSAVPAAILDKDLYGVYEVLGLSTLALA
EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLFLLAWTSTDNQLYPASLSWTIALKAIGNAVSRRKIVIAAAALTAALSIVKLHTFVIWW
HHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSLLTAVYGTHL
HHHHHHHHHCCC
>Mature Secondary Structure
MKPIVRLAYVGVPMLVALIISALALSVSKWGAPSPGRIDTAALPLAFGLVLGTFVNDSIV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEE
LSFDYQRFCWSVRDAVLTAFINFLGFWSFIIVVSAVPAAILDKDLYGVYEVLGLSTLALA
EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLFLLAWTSTDNQLYPASLSWTIALKAIGNAVSRRKIVIAAAALTAALSIVKLHTFVIWW
HHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSLLTAVYGTHL
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA