| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883864
Identifier: 218883864
GI number: 218883864
Start: 518923
End: 519297
Strand: Reverse
Name: 218883864
Synonym: DKAM_0553
Alternate gene names: NA
Gene position: 519297-518923 (Counterclockwise)
Preceding gene: 218883865
Following gene: 218883863
Centisome position: 38.04
GC content: 49.07
Gene sequence:
>375_bases ATGATTGTTGCGTTGCCGACTATCAGGACTAGCCGAGCAGACTACTTAAGCCCGCACTTCGGGAGAGCACCGTACTTCAC GCTAGCTGAAGTCCAGAACAAAAACTACAGGATCATTGATGTGGTTGAGAACCTGCACGCAAAACACGAACACAGGGGGG AAGTGATAATTAATCTCCTAGCGTCACGTGGGGTAGGCGCGGTCATAACGCTAGGTATTGGGTACGGAGCCTTCACTAAG CTGAGGGAACTCGGGATAAGAATATATTACGTGGAACCAGCAACACACGAGAAATTAGTGAGTGTTGAGGAAGCACTAAA CATGTTCGTCAATAACAAACTAGCGGAAGCGACGGAACCTCGCGAACACGACTGA
Upstream 100 bases:
>100_bases AAGAAGAACTAAAGTATCTTGAAGAACTAAGAAAGTACTTGAGTGAGGAAATACTGAGAGAAATAGACAAGAGGATAGAA GAGTTGAGGAGAACTTAACA
Downstream 100 bases:
>100_bases AACTTATTAACCCGAGGCTCAAGTAGAGTAGTTCTGGTGGTTGGAAGGACTTGAGCACTCAGCAGAAAACAAGTAGGTAC CAGCTACTCCCGCACTGTGG
Product: Dinitrogenase iron-molybdenum cofactor biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MIVALPTIRTSRADYLSPHFGRAPYFTLAEVQNKNYRIIDVVENLHAKHEHRGEVIINLLASRGVGAVITLGIGYGAFTK LRELGIRIYYVEPATHEKLVSVEEALNMFVNNKLAEATEPREHD
Sequences:
>Translated_124_residues MIVALPTIRTSRADYLSPHFGRAPYFTLAEVQNKNYRIIDVVENLHAKHEHRGEVIINLLASRGVGAVITLGIGYGAFTK LRELGIRIYYVEPATHEKLVSVEEALNMFVNNKLAEATEPREHD >Mature_124_residues MIVALPTIRTSRADYLSPHFGRAPYFTLAEVQNKNYRIIDVVENLHAKHEHRGEVIINLLASRGVGAVITLGIGYGAFTK LRELGIRIYYVEPATHEKLVSVEEALNMFVNNKLAEATEPREHD
Specific function: Unknown
COG id: COG1433
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13970; Mature: 13970
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVALPTIRTSRADYLSPHFGRAPYFTLAEVQNKNYRIIDVVENLHAKHEHRGEVIINLL CEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHCCCHHHHHHHH ASRGVGAVITLGIGYGAFTKLRELGIRIYYVEPATHEKLVSVEEALNMFVNNKLAEATEP HCCCCCEEEEEECCCHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHCCCHHCCCCC REHD CCCC >Mature Secondary Structure MIVALPTIRTSRADYLSPHFGRAPYFTLAEVQNKNYRIIDVVENLHAKHEHRGEVIINLL CEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHCCCHHHHHHHH ASRGVGAVITLGIGYGAFTKLRELGIRIYYVEPATHEKLVSVEEALNMFVNNKLAEATEP HCCCCCEEEEEECCCHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHCCCHHCCCCC REHD CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA