Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883825

Identifier: 218883825

GI number: 218883825

Start: 481644

End: 481895

Strand: Reverse

Name: 218883825

Synonym: DKAM_0514

Alternate gene names: NA

Gene position: 481895-481644 (Counterclockwise)

Preceding gene: 218883827

Following gene: 218883824

Centisome position: 35.3

GC content: 45.63

Gene sequence:

>252_bases
ATGACCAGGTATAAGGTAATAATAGACCGTTCTACATGCATAGCCTGCGGAGCAGCACCAGCCGCTTGCAGCGAGGTATT
CGAGTTAGGAGATGACAACGGTAAGAACCGGGTTGTAGCTAAGTACAGTGTTAAGTTAACCCCTGAAATATCCATTGGTA
TAATACCTGAAGATCTCTACGAGTGTGCTAAAAATGGTGCAGAGGTCTGCCCTGTATCAGCTATACGTGTCGAGAAAATA
GAGGGAGAGTAG

Upstream 100 bases:

>100_bases
ATGTTTTACCACATGGTTAAACATATGATAAGTTTTCAGGCAAACCACAAATGATAATATTTAAATTTTATACATAAAAA
TAATAATACATGGTGGAATC

Downstream 100 bases:

>100_bases
GTGTGTAATATTGAAATGCGGGGAGCATAGGTTTTTACACCATGTATACCTCACCCATGGATAGGTTACTGTCCTGTATT
AGACAAGGTTTCAGTTAACG

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 82

Protein sequence:

>83_residues
MTRYKVIIDRSTCIACGAAPAACSEVFELGDDNGKNRVVAKYSVKLTPEISIGIIPEDLYECAKNGAEVCPVSAIRVEKI
EGE

Sequences:

>Translated_83_residues
MTRYKVIIDRSTCIACGAAPAACSEVFELGDDNGKNRVVAKYSVKLTPEISIGIIPEDLYECAKNGAEVCPVSAIRVEKI
EGE
>Mature_82_residues
TRYKVIIDRSTCIACGAAPAACSEVFELGDDNGKNRVVAKYSVKLTPEISIGIIPEDLYECAKNGAEVCPVSAIRVEKIE
GE

Specific function: Unknown

COG id: COG1141

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8920; Mature: 8789

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
6.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRYKVIIDRSTCIACGAAPAACSEVFELGDDNGKNRVVAKYSVKLTPEISIGIIPEDLY
CCCEEEEEECCCEEEECCCCHHHHHHHHCCCCCCCCEEEEEEEEEECCCEEEEECCHHHH
ECAKNGAEVCPVSAIRVEKIEGE
HHHHCCCCCCCCCEEEEEEECCC
>Mature Secondary Structure 
TRYKVIIDRSTCIACGAAPAACSEVFELGDDNGKNRVVAKYSVKLTPEISIGIIPEDLY
CCEEEEEECCCEEEECCCCHHHHHHHHCCCCCCCCEEEEEEEEEECCCEEEEECCHHHH
ECAKNGAEVCPVSAIRVEKIEGE
HHHHCCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA