| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883825
Identifier: 218883825
GI number: 218883825
Start: 481644
End: 481895
Strand: Reverse
Name: 218883825
Synonym: DKAM_0514
Alternate gene names: NA
Gene position: 481895-481644 (Counterclockwise)
Preceding gene: 218883827
Following gene: 218883824
Centisome position: 35.3
GC content: 45.63
Gene sequence:
>252_bases ATGACCAGGTATAAGGTAATAATAGACCGTTCTACATGCATAGCCTGCGGAGCAGCACCAGCCGCTTGCAGCGAGGTATT CGAGTTAGGAGATGACAACGGTAAGAACCGGGTTGTAGCTAAGTACAGTGTTAAGTTAACCCCTGAAATATCCATTGGTA TAATACCTGAAGATCTCTACGAGTGTGCTAAAAATGGTGCAGAGGTCTGCCCTGTATCAGCTATACGTGTCGAGAAAATA GAGGGAGAGTAG
Upstream 100 bases:
>100_bases ATGTTTTACCACATGGTTAAACATATGATAAGTTTTCAGGCAAACCACAAATGATAATATTTAAATTTTATACATAAAAA TAATAATACATGGTGGAATC
Downstream 100 bases:
>100_bases GTGTGTAATATTGAAATGCGGGGAGCATAGGTTTTTACACCATGTATACCTCACCCATGGATAGGTTACTGTCCTGTATT AGACAAGGTTTCAGTTAACG
Product: ferredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MTRYKVIIDRSTCIACGAAPAACSEVFELGDDNGKNRVVAKYSVKLTPEISIGIIPEDLYECAKNGAEVCPVSAIRVEKI EGE
Sequences:
>Translated_83_residues MTRYKVIIDRSTCIACGAAPAACSEVFELGDDNGKNRVVAKYSVKLTPEISIGIIPEDLYECAKNGAEVCPVSAIRVEKI EGE >Mature_82_residues TRYKVIIDRSTCIACGAAPAACSEVFELGDDNGKNRVVAKYSVKLTPEISIGIIPEDLYECAKNGAEVCPVSAIRVEKIE GE
Specific function: Unknown
COG id: COG1141
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8920; Mature: 8789
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 6.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRYKVIIDRSTCIACGAAPAACSEVFELGDDNGKNRVVAKYSVKLTPEISIGIIPEDLY CCCEEEEEECCCEEEECCCCHHHHHHHHCCCCCCCCEEEEEEEEEECCCEEEEECCHHHH ECAKNGAEVCPVSAIRVEKIEGE HHHHCCCCCCCCCEEEEEEECCC >Mature Secondary Structure TRYKVIIDRSTCIACGAAPAACSEVFELGDDNGKNRVVAKYSVKLTPEISIGIIPEDLY CCEEEEEECCCEEEECCCCHHHHHHHHCCCCCCCCEEEEEEEEEECCCEEEEECCHHHH ECAKNGAEVCPVSAIRVEKIEGE HHHHCCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA