| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883822
Identifier: 218883822
GI number: 218883822
Start: 480522
End: 480887
Strand: Direct
Name: 218883822
Synonym: DKAM_0511
Alternate gene names: NA
Gene position: 480522-480887 (Clockwise)
Preceding gene: 218883821
Following gene: 218883823
Centisome position: 35.2
GC content: 42.62
Gene sequence:
>366_bases ATGGCATGCTTCATAACACCCCTTACACTTGGAATAATAATTGATGTAGTGAAAAGACTCATGGGTAAGACGGGCATAAA ACTAAGACTGGATATACTGGAGAAGATGCTTCTAGGAGGCTCCCTAGTACTAGCTGTGGAGCATGTATGGCATGGAGAAG TAGTACCATACCCACCATTTCTAACGGCCATGAGTAACCCGGCTGATATACCTGTAATGCTTCATGAAATAACTTATGTA GGTGGATTAATGAGTATGGCTGTGACTGCTACTTGGCTCGGCATACTCGCATATACAAGGAGCAGGATCACCAGTAGAAA ACTAGTGAAACAGTTAACAGGCGCTATCAGTTTTAACAGGGTTTAA
Upstream 100 bases:
>100_bases TACCAGACGCAAGATAGTGTTCGAGGAGCTTGCAGGGTTCTTCACTGAGAGAAGATAGTTTTATTAATGTGCACTTATTA TATTAAAATGGTGCACCAAA
Downstream 100 bases:
>100_bases GGGTTGGGCAATGTACGCCATAATACTCCTCATAGCCAGTATTACATCAACTATAGTATGGTACAAATACAGGGACGGCA AATATAGTCTTCAAACACTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MACFITPLTLGIIIDVVKRLMGKTGIKLRLDILEKMLLGGSLVLAVEHVWHGEVVPYPPFLTAMSNPADIPVMLHEITYV GGLMSMAVTATWLGILAYTRSRITSRKLVKQLTGAISFNRV
Sequences:
>Translated_121_residues MACFITPLTLGIIIDVVKRLMGKTGIKLRLDILEKMLLGGSLVLAVEHVWHGEVVPYPPFLTAMSNPADIPVMLHEITYV GGLMSMAVTATWLGILAYTRSRITSRKLVKQLTGAISFNRV >Mature_120_residues ACFITPLTLGIIIDVVKRLMGKTGIKLRLDILEKMLLGGSLVLAVEHVWHGEVVPYPPFLTAMSNPADIPVMLHEITYVG GLMSMAVTATWLGILAYTRSRITSRKLVKQLTGAISFNRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13292; Mature: 13161
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACFITPLTLGIIIDVVKRLMGKTGIKLRLDILEKMLLGGSLVLAVEHVWHGEVVPYPPF CCEEHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCH LTAMSNPADIPVMLHEITYVGGLMSMAVTATWLGILAYTRSRITSRKLVKQLTGAISFNR HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC V C >Mature Secondary Structure ACFITPLTLGIIIDVVKRLMGKTGIKLRLDILEKMLLGGSLVLAVEHVWHGEVVPYPPF CEEHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCH LTAMSNPADIPVMLHEITYVGGLMSMAVTATWLGILAYTRSRITSRKLVKQLTGAISFNR HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC V C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA